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The map label for this gene is 78223450

Identifier: 78223450

GI number: 78223450

Start: 2539017

End: 2540075

Strand: Reverse

Name: 78223450

Synonym: Gmet_2245

Alternate gene names: NA

Gene position: 2540075-2539017 (Counterclockwise)

Preceding gene: 78223451

Following gene: 78223449

Centisome position: 63.54

GC content: 50.42

Gene sequence:

>1059_bases
ATGCTGTCGAAAATATTAAAGACATCGTTATGTTTCATTTTCATGACTTGTTGGGTGACAACGGCACAAGCATTCAAAGG
ACCGCTTGAGACCCCTGCGTCTATGAAGCTCCATGCGACGACTAGCCAACTCACTGCGGTTACCCGTAATGGTAATAGAC
TTGCTGCAGTCGGGGCGAGGGGGCTCGTTCTTCTTTCGGACGACAATGGGAAAAAGTGGCAACAGGTTGCTGTGCCGGTC
AGTTCGAATCTTGTGTCAGTGCAGTTCCCGGTGCCTGATCAAGGCTGGGCTGTCGGCCATGATGGTGTCGTTTTGCATAG
TGGTGACGGTGGACGTACCTGGTCCAAACAGCTTGACGGCAATCAGGTGGCCAAGATAATGCTTAAACATTACGAAAAAC
TGGCTGCAGAGGGAGATGCCGCTGCCTCCAAGATTCTTCCAGATATTCAACGTATTTTACAGGAAGGGGCCGATAAGCCC
TTTATGGATGTTTGGTTTCTTGATGAGAAAGAAGGTTTTGTTGCCGGTGCATTTAATCTGATTATGCATACAACCGATGC
CGGTAAGACGTGGGTGCCCCTGTTTGAGCGCACAGATAACCCAAAAAACTTGCACATTTATGCACTCAAGGGGGTTGGTA
AGGAAGTTTATCTTGCCGGCGAGATGGGGATGTTGCGTCGCTGGGACCGCGCCAGCCAACGTTTTGTGACAATAGCATCT
CCGTACAAAGGAACTTTTTTCGGGCTGTTGGCAAAAGATACGACCATCCTTGCATTCGGCCTGCGTGGCAACGCATTTCG
CAGCAGCGACCGCGGGAATACATGGCGCAAGTTGAATACCAATACCACTGCTGGACTTACGGGAGGAACATTTCTCGATG
ATGGCCGTGCTGTTTTGGTGAGTCAGGACGGGCAGGTTCTGGTGATTGACGTTGGCAGCGAAACATTTGTGCCCGCGAAG
GTTTCAAGTCCAATGGCCTTTTCCAGTGTGGCACCAGCTGGCAAGAATGGCATTGTTGCGGTGGGTTCGCGGGGTGTCAT
AACTGAATCACTTAAATAG

Upstream 100 bases:

>100_bases
CTAATTGTGCCCATAACTTATGCCGTTTTTTCATCCGGAATTTCATGCAGAACGGATTACTGCTGCCAATAGAATAATTA
AGAAGAATGGAGGTTCATAA

Downstream 100 bases:

>100_bases
CGAAACTATCAACATGCGAGGACAATATGGCAATCCAAACTGAACAAGTCGATGCAATGCCGGTTGTGTCTGATCCAAAA
AACTTTGATAAAAACTCGGG

Product: BNR repeat-containing glycosyl hydrolase

Products: NA

Alternate protein names: Glycosyl Hydrolase; BNR/Asp-Box Repeat-Containing Protein; BNR Repeat-Containing Protein; BNR Domain-Containing Protein; Glycosyl Hydrolase BNR Repeat; BNR/Asp-Box Repeat Domain Protein; Plant Photosystem II Stability/Assembly Factor Protein; Protein Related Photosystem II Stability/Assembly Factor; Glycosyl Hydrolase BNR Repeat Protein; Oxidoreductase; BNR/Asp-Box Repeat Protein

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MLSKILKTSLCFIFMTCWVTTAQAFKGPLETPASMKLHATTSQLTAVTRNGNRLAAVGARGLVLLSDDNGKKWQQVAVPV
SSNLVSVQFPVPDQGWAVGHDGVVLHSGDGGRTWSKQLDGNQVAKIMLKHYEKLAAEGDAAASKILPDIQRILQEGADKP
FMDVWFLDEKEGFVAGAFNLIMHTTDAGKTWVPLFERTDNPKNLHIYALKGVGKEVYLAGEMGMLRRWDRASQRFVTIAS
PYKGTFFGLLAKDTTILAFGLRGNAFRSSDRGNTWRKLNTNTTAGLTGGTFLDDGRAVLVSQDGQVLVIDVGSETFVPAK
VSSPMAFSSVAPAGKNGIVAVGSRGVITESLK

Sequences:

>Translated_352_residues
MLSKILKTSLCFIFMTCWVTTAQAFKGPLETPASMKLHATTSQLTAVTRNGNRLAAVGARGLVLLSDDNGKKWQQVAVPV
SSNLVSVQFPVPDQGWAVGHDGVVLHSGDGGRTWSKQLDGNQVAKIMLKHYEKLAAEGDAAASKILPDIQRILQEGADKP
FMDVWFLDEKEGFVAGAFNLIMHTTDAGKTWVPLFERTDNPKNLHIYALKGVGKEVYLAGEMGMLRRWDRASQRFVTIAS
PYKGTFFGLLAKDTTILAFGLRGNAFRSSDRGNTWRKLNTNTTAGLTGGTFLDDGRAVLVSQDGQVLVIDVGSETFVPAK
VSSPMAFSSVAPAGKNGIVAVGSRGVITESLK
>Mature_352_residues
MLSKILKTSLCFIFMTCWVTTAQAFKGPLETPASMKLHATTSQLTAVTRNGNRLAAVGARGLVLLSDDNGKKWQQVAVPV
SSNLVSVQFPVPDQGWAVGHDGVVLHSGDGGRTWSKQLDGNQVAKIMLKHYEKLAAEGDAAASKILPDIQRILQEGADKP
FMDVWFLDEKEGFVAGAFNLIMHTTDAGKTWVPLFERTDNPKNLHIYALKGVGKEVYLAGEMGMLRRWDRASQRFVTIAS
PYKGTFFGLLAKDTTILAFGLRGNAFRSSDRGNTWRKLNTNTTAGLTGGTFLDDGRAVLVSQDGQVLVIDVGSETFVPAK
VSSPMAFSSVAPAGKNGIVAVGSRGVITESLK

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37947; Mature: 37947

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKILKTSLCFIFMTCWVTTAQAFKGPLETPASMKLHATTSQLTAVTRNGNRLAAVGAR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHEEEEEECCCEEEEECCC
GLVLLSDDNGKKWQQVAVPVSSNLVSVQFPVPDQGWAVGHDGVVLHSGDGGRTWSKQLDG
EEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCEECCCCEEEECCCCCCCHHHHCCC
NQVAKIMLKHYEKLAAEGDAAASKILPDIQRILQEGADKPFMDVWFLDEKEGFVAGAFNL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEE
IMHTTDAGKTWVPLFERTDNPKNLHIYALKGVGKEVYLAGEMGMLRRWDRASQRFVTIAS
EEEECCCCCEEEEHHCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHCCCEEEEEEC
PYKGTFFGLLAKDTTILAFGLRGNAFRSSDRGNTWRKLNTNTTAGLTGGTFLDDGRAVLV
CCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCEEEE
SQDGQVLVIDVGSETFVPAKVSSPMAFSSVAPAGKNGIVAVGSRGVITESLK
ECCCCEEEEECCCCEEECCCCCCCCEEHHCCCCCCCCEEEECCCCCEECCCC
>Mature Secondary Structure
MLSKILKTSLCFIFMTCWVTTAQAFKGPLETPASMKLHATTSQLTAVTRNGNRLAAVGAR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHEEEEEECCCEEEEECCC
GLVLLSDDNGKKWQQVAVPVSSNLVSVQFPVPDQGWAVGHDGVVLHSGDGGRTWSKQLDG
EEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCEECCCCEEEECCCCCCCHHHHCCC
NQVAKIMLKHYEKLAAEGDAAASKILPDIQRILQEGADKPFMDVWFLDEKEGFVAGAFNL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEE
IMHTTDAGKTWVPLFERTDNPKNLHIYALKGVGKEVYLAGEMGMLRRWDRASQRFVTIAS
EEEECCCCCEEEEHHCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHCCCEEEEEEC
PYKGTFFGLLAKDTTILAFGLRGNAFRSSDRGNTWRKLNTNTTAGLTGGTFLDDGRAVLV
CCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCEEEE
SQDGQVLVIDVGSETFVPAKVSSPMAFSSVAPAGKNGIVAVGSRGVITESLK
ECCCCEEEEECCCCEEECCCCCCCCEEHHCCCCCCCCEEEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA