| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223437
Identifier: 78223437
GI number: 78223437
Start: 2526180
End: 2526545
Strand: Reverse
Name: 78223437
Synonym: Gmet_2232
Alternate gene names: NA
Gene position: 2526545-2526180 (Counterclockwise)
Preceding gene: 78223438
Following gene: 78223436
Centisome position: 63.2
GC content: 44.26
Gene sequence:
>366_bases ATGGAAACAATTATCAAAAAGTATTTTGAACTGGTTAACAGCGACTCCGTAGATGGTCTGCTCGAACTGTGGAACGACAA CGGTACCTTCGATATTCCTATGCTGGGGGTACTAAAGGGTAAAGAGTCTTTTCGGAAGTTCTATCAGTCTCTGCCAGCCA TGTATGCGAAACATTATGACGATCCGGTCAAGTATGTGATTTCAGGCAATGAGGCGGTCGTAAAGGTCGTTGTAACCAAT ACCACACCTGAAGGTAAGACCGTTGTTTTCAATGCGTTCAGTTGGATGACTTTCTCTAACGGCAAGCTGGTGTCCATAGA GGCTAAATTCGACAGCGCCAAGCTTATGAAGGATTTGAAAGGATAG
Upstream 100 bases:
>100_bases TATAGAAAACTGGTTTTTTTTATGATACGAATGAACCGAACGGTCGATTATGTTGGTAGCGTAGGTTAACATTTATTGCG CATTATGAAAGGAGATAAAC
Downstream 100 bases:
>100_bases GCCCATCTGGGTTCAAGCTTTCCAGAAACGGCAAATTGGAGGATGCCTCATGCATGTCAGCGAATTGTTCAGCCTGAAAG GAAAAACAGCCATCATCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues METIIKKYFELVNSDSVDGLLELWNDNGTFDIPMLGVLKGKESFRKFYQSLPAMYAKHYDDPVKYVISGNEAVVKVVVTN TTPEGKTVVFNAFSWMTFSNGKLVSIEAKFDSAKLMKDLKG
Sequences:
>Translated_121_residues METIIKKYFELVNSDSVDGLLELWNDNGTFDIPMLGVLKGKESFRKFYQSLPAMYAKHYDDPVKYVISGNEAVVKVVVTN TTPEGKTVVFNAFSWMTFSNGKLVSIEAKFDSAKLMKDLKG >Mature_121_residues METIIKKYFELVNSDSVDGLLELWNDNGTFDIPMLGVLKGKESFRKFYQSLPAMYAKHYDDPVKYVISGNEAVVKVVVTN TTPEGKTVVFNAFSWMTFSNGKLVSIEAKFDSAKLMKDLKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13628; Mature: 13628
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIIKKYFELVNSDSVDGLLELWNDNGTFDIPMLGVLKGKESFRKFYQSLPAMYAKHYD CHHHHHHHHHHHCCCCCCHHHHHHCCCCEECCCHHEEECCHHHHHHHHHHHHHHHHHCCC DPVKYVISGNEAVVKVVVTNTTPEGKTVVFNAFSWMTFSNGKLVSIEAKFDSAKLMKDLK CCEEEEEECCCEEEEEEEECCCCCCCEEEEEEEEEEEECCCEEEEEEECCCHHHHHHHHC G C >Mature Secondary Structure METIIKKYFELVNSDSVDGLLELWNDNGTFDIPMLGVLKGKESFRKFYQSLPAMYAKHYD CHHHHHHHHHHHCCCCCCHHHHHHCCCCEECCCHHEEECCHHHHHHHHHHHHHHHHHCCC DPVKYVISGNEAVVKVVVTNTTPEGKTVVFNAFSWMTFSNGKLVSIEAKFDSAKLMKDLK CCEEEEEECCCEEEEEEEECCCCCCCEEEEEEEEEEEECCCEEEEEEECCCHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA