| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223355
Identifier: 78223355
GI number: 78223355
Start: 2417868
End: 2419211
Strand: Reverse
Name: 78223355
Synonym: Gmet_2148
Alternate gene names: NA
Gene position: 2419211-2417868 (Counterclockwise)
Preceding gene: 78223356
Following gene: 78223354
Centisome position: 60.52
GC content: 60.64
Gene sequence:
>1344_bases ATGAAGAACAAGGGACTTACGGTTGGAATCTCTGCTTTGCTTCTGGCCGCTCCGGCCATGGCCGAAGAGTTGCCCCAGAC CGTCGCGCCGGTCTACAACTGTGATTTTCAGCCAAACTGTGAAGTGGCCCCCGGCATCTACGGCAAGATGGCCTCGCCGG TCACCAGCAAATTCAACCTGAGCATCGGCGGCTACGTCAAGCTCGATTACGCGTACAACTCGGTCAACCTGGGGTCCAAC GGCGCCCTGGGCACGCTTCAGAGGGGCATCCCCAAGAGTAGTTCCCCCGCCGGCCAGGAGGATCAGTCCATCTTCACCGC CCGGCAGTCCCGGATCTGGCTGAAGGTTGGCGGCCCCACCTTCCTTGGCGCCAAGACCAATGCCATCATCGAAACGGACT TCTACGGCGGGGGCGGCGCTTCCAACGAGACCGCCACCATGCGGCTCCGCCTCGCCAATGCCTCGCTGGACTGGGCCAAT ACCCAACTGGTGCTGGGGCAGGCTTATGACATCTTCGGTCCGGCCACCGCCTCCACCGTCGATTTCGGCCAGGCGGCCAT GACCGGCGCCCCGAACAACCCGCGGGTGCCCCAGATCAGGGTAACCCATCGGCTGAACCTCAATGACAAGAATGCCCTGC GGCTGGTCCTCGGGGTGCAGAATCCGGTTCAGGATTCCAATCTCCAAGGGGCAAGCGGTGACTCATGGGGGGCCAAGGTC AACGTGGCCGGCCAGGCAATGCTCATCAGCAAGGTTCTCGGGGTTGCGCCGGGCTACTACGGCATGTCCATGAATTCGCT GACAGCGGGCTTCTTCGGCCTCTACGGCAACCAGGACGTTGCCGGTAACAAAGATTCGGTGGATAGCTGGGGATACGGCT TCTATACCTTCGTGCCGCTCCTGCCGTCAAAGGATGGTAAAAACCGCGCCATGACCGCCTCCTTTGAGGGGCAGGCCTAC ATGGCCGCCAACATGTATACCATTGGCGCTACGGCGGGAACCGTGGTTGGAGCTGCCGGCGACAAGAAGCCCGCCAAGGG GTACGGCATATACAGCCAGCTTATTTTCTACCCGACTCAGGACCTGGGGATTACGGCCGGTTATGCCCGGCGGAACGCCT ATAACTACGCAAGCTACAGAGGCATCGATAACTTCGAGAAATCCAACTCGGCCATCTATGCCAACGTTACCTACGATCTG AATGCTGCGCTCCGGTTTGCCGTCGAATACCAGAACATCAACACCCAGTACGGCAACGTCACCAACGGCACCGGCAACCT GGCGGGCCTGGCGACCTCCGGTACCGCCAACATCGGGCGCTTCGCCGCCTATTACTTCTTCTAG
Upstream 100 bases:
>100_bases CTGAAAGGGGGAGCAGGGAGCAAGCGCAGAAGTCGCATGTGTCATGGGAGTGCAACGGGAAAGTGAAGGTTTGCAGATCA TCTCTTTTTGTGGAGGAAAC
Downstream 100 bases:
>100_bases TAAATGATAAAACAGTGTTACAGTGTTTGAGCTGTTGCAACAGTTGTAATCAGTCCCCTCCCCCTGTGCGGGGGAGGGGC ATGTTGCCTGTCTGCTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MKNKGLTVGISALLLAAPAMAEELPQTVAPVYNCDFQPNCEVAPGIYGKMASPVTSKFNLSIGGYVKLDYAYNSVNLGSN GALGTLQRGIPKSSSPAGQEDQSIFTARQSRIWLKVGGPTFLGAKTNAIIETDFYGGGGASNETATMRLRLANASLDWAN TQLVLGQAYDIFGPATASTVDFGQAAMTGAPNNPRVPQIRVTHRLNLNDKNALRLVLGVQNPVQDSNLQGASGDSWGAKV NVAGQAMLISKVLGVAPGYYGMSMNSLTAGFFGLYGNQDVAGNKDSVDSWGYGFYTFVPLLPSKDGKNRAMTASFEGQAY MAANMYTIGATAGTVVGAAGDKKPAKGYGIYSQLIFYPTQDLGITAGYARRNAYNYASYRGIDNFEKSNSAIYANVTYDL NAALRFAVEYQNINTQYGNVTNGTGNLAGLATSGTANIGRFAAYYFF
Sequences:
>Translated_447_residues MKNKGLTVGISALLLAAPAMAEELPQTVAPVYNCDFQPNCEVAPGIYGKMASPVTSKFNLSIGGYVKLDYAYNSVNLGSN GALGTLQRGIPKSSSPAGQEDQSIFTARQSRIWLKVGGPTFLGAKTNAIIETDFYGGGGASNETATMRLRLANASLDWAN TQLVLGQAYDIFGPATASTVDFGQAAMTGAPNNPRVPQIRVTHRLNLNDKNALRLVLGVQNPVQDSNLQGASGDSWGAKV NVAGQAMLISKVLGVAPGYYGMSMNSLTAGFFGLYGNQDVAGNKDSVDSWGYGFYTFVPLLPSKDGKNRAMTASFEGQAY MAANMYTIGATAGTVVGAAGDKKPAKGYGIYSQLIFYPTQDLGITAGYARRNAYNYASYRGIDNFEKSNSAIYANVTYDL NAALRFAVEYQNINTQYGNVTNGTGNLAGLATSGTANIGRFAAYYFF >Mature_447_residues MKNKGLTVGISALLLAAPAMAEELPQTVAPVYNCDFQPNCEVAPGIYGKMASPVTSKFNLSIGGYVKLDYAYNSVNLGSN GALGTLQRGIPKSSSPAGQEDQSIFTARQSRIWLKVGGPTFLGAKTNAIIETDFYGGGGASNETATMRLRLANASLDWAN TQLVLGQAYDIFGPATASTVDFGQAAMTGAPNNPRVPQIRVTHRLNLNDKNALRLVLGVQNPVQDSNLQGASGDSWGAKV NVAGQAMLISKVLGVAPGYYGMSMNSLTAGFFGLYGNQDVAGNKDSVDSWGYGFYTFVPLLPSKDGKNRAMTASFEGQAY MAANMYTIGATAGTVVGAAGDKKPAKGYGIYSQLIFYPTQDLGITAGYARRNAYNYASYRGIDNFEKSNSAIYANVTYDL NAALRFAVEYQNINTQYGNVTNGTGNLAGLATSGTANIGRFAAYYFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47324; Mature: 47324
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKGLTVGISALLLAAPAMAEELPQTVAPVYNCDFQPNCEVAPGIYGKMASPVTSKFNL CCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCEEEE SIGGYVKLDYAYNSVNLGSNGALGTLQRGIPKSSSPAGQEDQSIFTARQSRIWLKVGGPT EECCEEEEEEEECEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHHEEECCEEEEEECCCE FLGAKTNAIIETDFYGGGGASNETATMRLRLANASLDWANTQLVLGQAYDIFGPATASTV EECCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECEEECCCCCCCCEE DFGQAAMTGAPNNPRVPQIRVTHRLNLNDKNALRLVLGVQNPVQDSNLQGASGDSWGAKV CCCCHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEE NVAGQAMLISKVLGVAPGYYGMSMNSLTAGFFGLYGNQDVAGNKDSVDSWGYGFYTFVPL EECCHHHHHHHHHHCCCCCCCCCHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEEE LPSKDGKNRAMTASFEGQAYMAANMYTIGATAGTVVGAAGDKKPAKGYGIYSQLIFYPTQ CCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCC DLGITAGYARRNAYNYASYRGIDNFEKSNSAIYANVTYDLNAALRFAVEYQNINTQYGNV CCCEEECHHHCCCCCCHHCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCE TNGTGNLAGLATSGTANIGRFAAYYFF ECCCCCEEEEEECCCCCCCCEEEEEEC >Mature Secondary Structure MKNKGLTVGISALLLAAPAMAEELPQTVAPVYNCDFQPNCEVAPGIYGKMASPVTSKFNL CCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCEEEE SIGGYVKLDYAYNSVNLGSNGALGTLQRGIPKSSSPAGQEDQSIFTARQSRIWLKVGGPT EECCEEEEEEEECEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHHEEECCEEEEEECCCE FLGAKTNAIIETDFYGGGGASNETATMRLRLANASLDWANTQLVLGQAYDIFGPATASTV EECCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECEEECCCCCCCCEE DFGQAAMTGAPNNPRVPQIRVTHRLNLNDKNALRLVLGVQNPVQDSNLQGASGDSWGAKV CCCCHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEE NVAGQAMLISKVLGVAPGYYGMSMNSLTAGFFGLYGNQDVAGNKDSVDSWGYGFYTFVPL EECCHHHHHHHHHHCCCCCCCCCHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEEE LPSKDGKNRAMTASFEGQAYMAANMYTIGATAGTVVGAAGDKKPAKGYGIYSQLIFYPTQ CCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCC DLGITAGYARRNAYNYASYRGIDNFEKSNSAIYANVTYDLNAALRFAVEYQNINTQYGNV CCCEEECHHHCCCCCCHHCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCE TNGTGNLAGLATSGTANIGRFAAYYFF ECCCCCEEEEEECCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA