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The map label for this gene is yqeB [H]

Identifier: 78223345

GI number: 78223345

Start: 2405213

End: 2406019

Strand: Direct

Name: yqeB [H]

Synonym: Gmet_2138

Alternate gene names: 78223345

Gene position: 2405213-2406019 (Clockwise)

Preceding gene: 78223344

Following gene: 78223346

Centisome position: 60.17

GC content: 62.95

Gene sequence:

>807_bases
ATGAAACGGTTGACGGAACGCGTCATCATCATGAAGGGAGCGGGAGAAATGGCTACCGGTGTGGCTTGCCGGCTCCATCG
GTCAGGGTTCCGGCGTATCCTCATGCTGGAAGCCCCTTCCCCTCTCGCGGTCAGACGGGGGGTTTCCTTCTGCGAAGCCA
TCCATAACGGCAGGAAATCGGTGGAGGGGATAGAGGCAGTCAGGATCGAAAACGGATCCGCCCTGGCCGATGCCTGGGGA
AAGGGGGAAATTCCCCTGCTGGCCGACCCGCAAGGGGATGCCGTGCGCCGCATGGAACCCGACATCCTCATCGATGCAAC
GATAGCCAAGCGGAATCTCGGCATTGCCATCACCGACGCGCCGCTCGTGATCGCCCTGGGTCCCGGCTTCTTTGCCGGCA
GGGACTGCCATCTGGTGATTGAAACCAACCGGGGCCACAATCTGGGGCGGCTTATCGCCTGTGGCGAGGCGGAGCCCAAC
ACCGGCATCCCCGGCAACATCGGCGGTTATACCAGGGAGCGGGTTCTCCGCGCGCCGGCCGACGGCCACTTCACGACCGA
AAAGGTGATCGGCGACCAGGTCAGCAAGGGGGATGTGGTCGGCATCGTCGGCACCAACACGGTTACGGCTTCCATCGACG
GCATCCTGCGGGGGCTGATACGGCCCGGCACCCATGTCACGACCGGCCTCAAGATCGGCGATATCGATCCCCGTGGGGAT
ACGGCCTATTGCCATACCATTTCGGAGAAGGCCCGCGCCCTTGGCGGGTCGGTGCTGGAAGCGATACTTACCGTCTACAA
CCAGTGA

Upstream 100 bases:

>100_bases
CCCCATCGGTCACGACAACGGCGGCAACTCGCCCCGGGAAATCGCCATCAGCATCGCCAGCCAGCTTCTTTCCACCTACT
ACGGGCGGGAGTGAACCACC

Downstream 100 bases:

>100_bases
GCCATGGACCATGGAAAATTTCGCCGAAATAGTGGGTATCGGACCTGCGGGAGTGATAAGCATCACCGGCGGAGGCGGCA
AAACGAGCCTCATGTTCCAC

Product: biotin/lipoyl attachment

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKRLTERVIIMKGAGEMATGVACRLHRSGFRRILMLEAPSPLAVRRGVSFCEAIHNGRKSVEGIEAVRIENGSALADAWG
KGEIPLLADPQGDAVRRMEPDILIDATIAKRNLGIAITDAPLVIALGPGFFAGRDCHLVIETNRGHNLGRLIACGEAEPN
TGIPGNIGGYTRERVLRAPADGHFTTEKVIGDQVSKGDVVGIVGTNTVTASIDGILRGLIRPGTHVTTGLKIGDIDPRGD
TAYCHTISEKARALGGSVLEAILTVYNQ

Sequences:

>Translated_268_residues
MKRLTERVIIMKGAGEMATGVACRLHRSGFRRILMLEAPSPLAVRRGVSFCEAIHNGRKSVEGIEAVRIENGSALADAWG
KGEIPLLADPQGDAVRRMEPDILIDATIAKRNLGIAITDAPLVIALGPGFFAGRDCHLVIETNRGHNLGRLIACGEAEPN
TGIPGNIGGYTRERVLRAPADGHFTTEKVIGDQVSKGDVVGIVGTNTVTASIDGILRGLIRPGTHVTTGLKIGDIDPRGD
TAYCHTISEKARALGGSVLEAILTVYNQ
>Mature_268_residues
MKRLTERVIIMKGAGEMATGVACRLHRSGFRRILMLEAPSPLAVRRGVSFCEAIHNGRKSVEGIEAVRIENGSALADAWG
KGEIPLLADPQGDAVRRMEPDILIDATIAKRNLGIAITDAPLVIALGPGFFAGRDCHLVIETNRGHNLGRLIACGEAEPN
TGIPGNIGGYTRERVLRAPADGHFTTEKVIGDQVSKGDVVGIVGTNTVTASIDGILRGLIRPGTHVTTGLKIGDIDPRGD
TAYCHTISEKARALGGSVLEAILTVYNQ

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=263, Percent_Identity=46.3878326996198, Blast_Score=236, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 28396; Mature: 28396

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLTERVIIMKGAGEMATGVACRLHRSGFRRILMLEAPSPLAVRRGVSFCEAIHNGRKS
CCCCCCEEEEEECCCCHHHHHHHHEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHH
VEGIEAVRIENGSALADAWGKGEIPLLADPQGDAVRRMEPDILIDATIAKRNLGIAITDA
CCCEEEEEEECCCEEECCCCCCCCCEEECCCCCHHHHCCCCEEEEEEEECCCCCEEEECC
PLVIALGPGFFAGRDCHLVIETNRGHNLGRLIACGEAEPNTGIPGNIGGYTRERVLRAPA
CEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHEECCC
DGHFTTEKVIGDQVSKGDVVGIVGTNTVTASIDGILRGLIRPGTHVTTGLKIGDIDPRGD
CCCEEHHHHHCCCCCCCCEEEEEECCEEEEHHHHHHHHHHCCCCEEECCEEECCCCCCCC
TAYCHTISEKARALGGSVLEAILTVYNQ
CEEEEHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MKRLTERVIIMKGAGEMATGVACRLHRSGFRRILMLEAPSPLAVRRGVSFCEAIHNGRKS
CCCCCCEEEEEECCCCHHHHHHHHEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHH
VEGIEAVRIENGSALADAWGKGEIPLLADPQGDAVRRMEPDILIDATIAKRNLGIAITDA
CCCEEEEEEECCCEEECCCCCCCCCEEECCCCCHHHHCCCCEEEEEEEECCCCCEEEECC
PLVIALGPGFFAGRDCHLVIETNRGHNLGRLIACGEAEPNTGIPGNIGGYTRERVLRAPA
CEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHEECCC
DGHFTTEKVIGDQVSKGDVVGIVGTNTVTASIDGILRGLIRPGTHVTTGLKIGDIDPRGD
CCCEEHHHHHCCCCCCCCEEEEEECCEEEEHHHHHHHHHHCCCCEEECCEEECCCCCCCC
TAYCHTISEKARALGGSVLEAILTVYNQ
CEEEEHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]