| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223337
Identifier: 78223337
GI number: 78223337
Start: 2397986
End: 2398384
Strand: Direct
Name: 78223337
Synonym: Gmet_2130
Alternate gene names: NA
Gene position: 2397986-2398384 (Clockwise)
Preceding gene: 78223336
Following gene: 78223338
Centisome position: 59.99
GC content: 53.88
Gene sequence:
>399_bases ATGAAAGAAGTCCTCGATATGCTTCCCGCCCCCTGTTACGGCAGCCTGGCAACGGTGGCCGGCGGCAAACCCCGGGTCAG GCCCTTTGCCTTCATGTATGAAGAAAACGGTCGATTCTATTTCTGCACGGCCAGCAACAAAGAGGTTTACCGGCAACTGA CCGAGACGCCGTTCATCGAATTCACCAGGACCGATGAACAGATGCGCTGGCTGAGAATCGGCGGCGAGATCACATTCGAC GAGGATATCAAGAGCAGGGAGAAATGCTTCGCCAACTATCCCATGCTCAAAGATATCTATCAGACGCCTGACAACCCGCT CTTCAAGGTGTTTTACCTGGAGCACGGCGCGGCATCCGTTAACAGTCTGACCGAACCGCCCAAGAACTTTGAATTCTGA
Upstream 100 bases:
>100_bases CCTGGCCCTGTTCCTCTCCTCCGATGACAGCGCCTTCATCACCGGCCAGATGATCGTCCACGACGGCGGATTGTCGTTCC ACTAAGGGATGGAGGGTGCC
Downstream 100 bases:
>100_bases CCCCAGAAAGGGATAACCATGAAAGAATACAGACTTTTCATCAACGGAGAATGGGTGCCCTCCTCCACGGGCACCATGGC CGACGACATCAATCCGGCCA
Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKEVLDMLPAPCYGSLATVAGGKPRVRPFAFMYEENGRFYFCTASNKEVYRQLTETPFIEFTRTDEQMRWLRIGGEITFD EDIKSREKCFANYPMLKDIYQTPDNPLFKVFYLEHGAASVNSLTEPPKNFEF
Sequences:
>Translated_132_residues MKEVLDMLPAPCYGSLATVAGGKPRVRPFAFMYEENGRFYFCTASNKEVYRQLTETPFIEFTRTDEQMRWLRIGGEITFD EDIKSREKCFANYPMLKDIYQTPDNPLFKVFYLEHGAASVNSLTEPPKNFEF >Mature_132_residues MKEVLDMLPAPCYGSLATVAGGKPRVRPFAFMYEENGRFYFCTASNKEVYRQLTETPFIEFTRTDEQMRWLRIGGEITFD EDIKSREKCFANYPMLKDIYQTPDNPLFKVFYLEHGAASVNSLTEPPKNFEF
Specific function: Unknown
COG id: COG5015
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15392; Mature: 15392
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVLDMLPAPCYGSLATVAGGKPRVRPFAFMYEENGRFYFCTASNKEVYRQLTETPFIE CCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHCCCCEE FTRTDEQMRWLRIGGEITFDEDIKSREKCFANYPMLKDIYQTPDNPLFKVFYLEHGAASV EECCCHHEEEEEECCEEEECHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCCCH NSLTEPPKNFEF HHCCCCCCCCCC >Mature Secondary Structure MKEVLDMLPAPCYGSLATVAGGKPRVRPFAFMYEENGRFYFCTASNKEVYRQLTETPFIE CCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHCCCCEE FTRTDEQMRWLRIGGEITFDEDIKSREKCFANYPMLKDIYQTPDNPLFKVFYLEHGAASV EECCCHHEEEEEECCEEEECHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCCCH NSLTEPPKNFEF HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA