| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223263
Identifier: 78223263
GI number: 78223263
Start: 2310406
End: 2311263
Strand: Reverse
Name: 78223263
Synonym: Gmet_2056
Alternate gene names: NA
Gene position: 2311263-2310406 (Counterclockwise)
Preceding gene: 78223264
Following gene: 78223262
Centisome position: 57.82
GC content: 57.11
Gene sequence:
>858_bases ATGACCTCTGAGATTATCGATGTTCACATGCATTGTTTTGTGGGCCGCCAGCAGGAGACGGCTCTTGCCCGCGATATCGC CCTGCTGCGCCGTGAAGGGCTCAGGCGGATGGTCGTTGCTGGTCTGGTGAATACCCACCCGGATCCTGAAACCACCTGGA ACCTAATTCCCGATTACGTCGAAAATCATGGGGATCCCCATTTCAACGAAGCGGATGATTTGCTGGCGCTCGCGGAATCC GTGGATCACGCCCTATTGCCCTTCGTCGATACGCGCTACCTGCGGGGCGACGTGGCGACAGCCCTTGACGGGTATATGGG GCAGGGGTTCAAGGGGGTCAAGGGGATCTATCTACCAGATAACGAGAACGACCTTGGTGTCGGCAACGTGCCGGATACCC TCGGCATCAGTCTCGAACAGTACCGCCGCAGGGAATGGGACCTGTTTGCCTACGCCGAGAACCATGATCTTCCTCTGCTC TACCACATGGACGCCCGCCGATACGGCGACGTGATGAAAGACCTTCTGGACGATTTTCCGCGGGTACGGGTCAATTTCCC CCACCTGGGGATCGGCCGCAAGGCGTTCAGTGCGTTTCTCGACCGCTACCCCAACATCTTTACCGACATTGCCGGCCTTC TGCCGTACATGCGGAGTAATCCCGCCAGTTACCGCGACTTCATCATGCACTATCCCGACCGGATCTGCTTCGGAACCGAT ACCTTTCTCTATCAGGCCGGCTCTGCCCTTGACTACATCAGCATGGTCAGGGAGCTGAGATTGCCTGAAGAAATCGAAGC GCAGGTGTTCAACGGTAACCCCACCAGGTTTCTGGGGTGTGTCTTGTATGGTGCATAG
Upstream 100 bases:
>100_bases ATCTGGAGGCGGTCACGGCCTTTCTGGAAAAACGGGCGCCCCGCTACAGCGGACGGTAGTGGCCGCCAGTGTTGAATATT CAGCGGCCGGGAGCGCGATT
Downstream 100 bases:
>100_bases CCTTGGTATGCATTTATATAAAATAATGTTTTATCAATTGACAGAAGTCTAACCTCTTGTATAAACTCAATTAAAATGTA TGAAGCTAAGACCGGGTGAC
Product: amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTSEIIDVHMHCFVGRQQETALARDIALLRREGLRRMVVAGLVNTHPDPETTWNLIPDYVENHGDPHFNEADDLLALAES VDHALLPFVDTRYLRGDVATALDGYMGQGFKGVKGIYLPDNENDLGVGNVPDTLGISLEQYRRREWDLFAYAENHDLPLL YHMDARRYGDVMKDLLDDFPRVRVNFPHLGIGRKAFSAFLDRYPNIFTDIAGLLPYMRSNPASYRDFIMHYPDRICFGTD TFLYQAGSALDYISMVRELRLPEEIEAQVFNGNPTRFLGCVLYGA
Sequences:
>Translated_285_residues MTSEIIDVHMHCFVGRQQETALARDIALLRREGLRRMVVAGLVNTHPDPETTWNLIPDYVENHGDPHFNEADDLLALAES VDHALLPFVDTRYLRGDVATALDGYMGQGFKGVKGIYLPDNENDLGVGNVPDTLGISLEQYRRREWDLFAYAENHDLPLL YHMDARRYGDVMKDLLDDFPRVRVNFPHLGIGRKAFSAFLDRYPNIFTDIAGLLPYMRSNPASYRDFIMHYPDRICFGTD TFLYQAGSALDYISMVRELRLPEEIEAQVFNGNPTRFLGCVLYGA >Mature_284_residues TSEIIDVHMHCFVGRQQETALARDIALLRREGLRRMVVAGLVNTHPDPETTWNLIPDYVENHGDPHFNEADDLLALAESV DHALLPFVDTRYLRGDVATALDGYMGQGFKGVKGIYLPDNENDLGVGNVPDTLGISLEQYRRREWDLFAYAENHDLPLLY HMDARRYGDVMKDLLDDFPRVRVNFPHLGIGRKAFSAFLDRYPNIFTDIAGLLPYMRSNPASYRDFIMHYPDRICFGTDT FLYQAGSALDYISMVRELRLPEEIEAQVFNGNPTRFLGCVLYGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32510; Mature: 32379
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEIIDVHMHCFVGRQQETALARDIALLRREGLRRMVVAGLVNTHPDPETTWNLIPDYV CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHH ENHGDPHFNEADDLLALAESVDHALLPFVDTRYLRGDVATALDGYMGQGFKGVKGIYLPD HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCC NENDLGVGNVPDTLGISLEQYRRREWDLFAYAENHDLPLLYHMDARRYGDVMKDLLDDFP CCCCCCCCCCCHHHCCCHHHHHCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHCCC RVRVNFPHLGIGRKAFSAFLDRYPNIFTDIAGLLPYMRSNPASYRDFIMHYPDRICFGTD CEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCH TFLYQAGSALDYISMVRELRLPEEIEAQVFNGNPTRFLGCVLYGA HHHHHCCCHHHHHHHHHHHCCCHHHHHEEECCCCCEEEHEEEECC >Mature Secondary Structure TSEIIDVHMHCFVGRQQETALARDIALLRREGLRRMVVAGLVNTHPDPETTWNLIPDYV CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHH ENHGDPHFNEADDLLALAESVDHALLPFVDTRYLRGDVATALDGYMGQGFKGVKGIYLPD HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCC NENDLGVGNVPDTLGISLEQYRRREWDLFAYAENHDLPLLYHMDARRYGDVMKDLLDDFP CCCCCCCCCCCHHHCCCHHHHHCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHCCC RVRVNFPHLGIGRKAFSAFLDRYPNIFTDIAGLLPYMRSNPASYRDFIMHYPDRICFGTD CEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCH TFLYQAGSALDYISMVRELRLPEEIEAQVFNGNPTRFLGCVLYGA HHHHHCCCHHHHHHHHHHHCCCHHHHHEEECCCCCEEEHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA