| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223202
Identifier: 78223202
GI number: 78223202
Start: 2228165
End: 2230315
Strand: Direct
Name: 78223202
Synonym: Gmet_1995
Alternate gene names: NA
Gene position: 2228165-2230315 (Clockwise)
Preceding gene: 78223198
Following gene: 78223243
Centisome position: 55.74
GC content: 59.27
Gene sequence:
>2151_bases ATGCCCCTCAATAAATTCCTCATCGTTGCCGTTTTCGTTGCCATTACCGCTGCAAGCGCCCTAGCCGGCGACAAGCTGAA GCCCTATGCTGCAACTCCAGACCGGGTTCTCGTCATCTACAACGCCGACTGGAAAAACCGGAGTGAAGGGAGCGCCGCTG AACAGGATTCGCGGGAAGTGGCCGAGTACTTCGCGGCCATGCACGCCGACCCGAAATCCGGGAAGAAACCCTATCTCCTC GGCCTGAGTTGCCGTCACCCGGGCAAGAAACATCTGAATGACTGGGCCATCCGGGAAGCGAGCACCGATAACCGCAACGG CATCGCGTTCAGAGGCAAGGGCCCGGCCCCGGGCCGTGGTGAACTGATCCGTGATTCACGCAAGGTGGAAGTCCACATTT CAGAGCCGGACGCCGACTGGGAGACCCTCCGCATTTCCTGCCGTTCCGAGGTGACCGGAGAGGAAAAAGTCGTCCCCCCA ATCTCAACGGCTTTGCAAATCAGCGGCATTCCGGCCAAACCGGGTAACGATGCCGTCTATCCTCCCCCTGCGGACGGCAA GGGCAGAAGCATCCGGCTCGACGCCACCAGGTTCTTTGCCGGAACCGTCACCGTTTCTATCACTTTGAAGAACCATGCCG GCACGGTGCTTCGAGACCTCAAGCTCCGCTACCATGACATCCGGAACTTCATTTTCTCCCCCACCGGTCCCGATAACATT CCCGACGACAAAATCCTTGAGGAAGATCTGCTGACACCAGTGAGAACGTTCCTCGAAGACCCACGAAATGCCCTTCCCGA CGGCACACGCCTCAAGGATCACATTCTCTATATCGTCGTGGTGCATGGCGTCCCCTATGCGGGAAACGGCATCTTCGGCG TCGACCACGGCGTCACCTCAAGCTGGGGCGAACACGGATCCCTCACCTCTGTCGAGCAGCGGCTGCAGACCATCTACTAC CCTTGGGCAACCCTGCGGCCCCCCGTAATCTCTCTCTACAATTCCCGGGGAAAAGACTCCGACAAGGGGGTAATCAATCA CCTGATAACGACAGCCATGCGGAATCCCCTCGGGGGAGCCCGCTGGAATCCCTACATGCACCCCGACACCTACTCCTACC TGCAGAAAGGAGCGCCTCCCCCCACCTTCATCAACCTCCCTCCCTTTGAGCGGGAGCGTCGGGAAAAGAAAGGAGCCTTC TTCGCCTACGCCGTCTCACGCATTGACGGTAACACCCCCGAAGAGGCCAAGCGGCTGATTGACTACGCCGTCTACGCCTC GAAGTACCTTCGCTCCGAAATGGATGCCGAAGAGCGGGTCGACACCCTGAAACGCTTCTTGACGCCGAAGCTTTCTTCGC TCCTCGAATCGGCGGTCGTGGAGAAATCATCGGGGGGGAAAGAACTCGCTGCCCTCGGTTTCCCGATCCGAGAATCGGAG GGTGGCCAAGGGGTTCCCTTCATGGTCCGTCCCGCAAGCGACACAGCAAGCCCCGACAAATCCGGTACGAGAGACTGGCG GCGATCCGGATTCTACCCAGGTGGGATTGAACGCTTTGTGAAAAGCTCCAACGGCCTCAACAAAAAAGACGCCGGCATCT GGCAGCTCATATCTCAGGGAGTCACCGTTACTGCGGCAGGCTCGCCAGCCGGCAGCGGCGGTCCCCACATTACCAACACA ACCTTCTGGGATAACCGGGTTCTGCTGAAATATCTCTTGCGCGGCAGAGACCTTGGGGAATGCTTTCTCCGTTCCACCTA TCACGTGAACTGGTCCACGTCGCTGATCGGCGATCCCCTCTTCCACCCCGACCTGAACCATACCATCGTGGACGAGACCC CGCCGCGGGCGTCCAAGGGACTCGCTATCCAGTGGGCAGTCAGAGACGGCAAAGCCACTGCCATGGTCGGCACTGAGCTG GACTTCGATCCGAGCGCACCGGAAGTAGCCCTCATGAATGTCACCGTCACGGCAGCCGATACTCAGCCTTCCACAACCCG AACGGCTCTTTATTCGCGGAGGCCAACTATTGCCGTCACCGGCTTGAAACCCGGCAGCTCCTATCACTTCACCGCAGAAC TGACCGATCCTTACGGAAATCGGTCCGTCCTGCGCGAGGTCGTCAGCGCAGCTCCCGGATCAGGGCAATAA
Upstream 100 bases:
>100_bases GTAAAGAATTTCGACACAAAAAAGAAACTGCGTGACAAATGTAAACTGTTCCGACAGACAGACTCTGGTATACTCTGGGT CGAACCCAAGGAGAGACTCC
Downstream 100 bases:
>100_bases TCCTGCCGCGAACCTCATCAAAGCTTCCAGGCGGCCATGCGCCGTAACTCCCTTCCGCTGCAGAGGGTCCGGCGCCAAGG CTTGCCCTGATGCGCTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 716; Mature: 715
Protein sequence:
>716_residues MPLNKFLIVAVFVAITAASALAGDKLKPYAATPDRVLVIYNADWKNRSEGSAAEQDSREVAEYFAAMHADPKSGKKPYLL GLSCRHPGKKHLNDWAIREASTDNRNGIAFRGKGPAPGRGELIRDSRKVEVHISEPDADWETLRISCRSEVTGEEKVVPP ISTALQISGIPAKPGNDAVYPPPADGKGRSIRLDATRFFAGTVTVSITLKNHAGTVLRDLKLRYHDIRNFIFSPTGPDNI PDDKILEEDLLTPVRTFLEDPRNALPDGTRLKDHILYIVVVHGVPYAGNGIFGVDHGVTSSWGEHGSLTSVEQRLQTIYY PWATLRPPVISLYNSRGKDSDKGVINHLITTAMRNPLGGARWNPYMHPDTYSYLQKGAPPPTFINLPPFERERREKKGAF FAYAVSRIDGNTPEEAKRLIDYAVYASKYLRSEMDAEERVDTLKRFLTPKLSSLLESAVVEKSSGGKELAALGFPIRESE GGQGVPFMVRPASDTASPDKSGTRDWRRSGFYPGGIERFVKSSNGLNKKDAGIWQLISQGVTVTAAGSPAGSGGPHITNT TFWDNRVLLKYLLRGRDLGECFLRSTYHVNWSTSLIGDPLFHPDLNHTIVDETPPRASKGLAIQWAVRDGKATAMVGTEL DFDPSAPEVALMNVTVTAADTQPSTTRTALYSRRPTIAVTGLKPGSSYHFTAELTDPYGNRSVLREVVSAAPGSGQ
Sequences:
>Translated_716_residues MPLNKFLIVAVFVAITAASALAGDKLKPYAATPDRVLVIYNADWKNRSEGSAAEQDSREVAEYFAAMHADPKSGKKPYLL GLSCRHPGKKHLNDWAIREASTDNRNGIAFRGKGPAPGRGELIRDSRKVEVHISEPDADWETLRISCRSEVTGEEKVVPP ISTALQISGIPAKPGNDAVYPPPADGKGRSIRLDATRFFAGTVTVSITLKNHAGTVLRDLKLRYHDIRNFIFSPTGPDNI PDDKILEEDLLTPVRTFLEDPRNALPDGTRLKDHILYIVVVHGVPYAGNGIFGVDHGVTSSWGEHGSLTSVEQRLQTIYY PWATLRPPVISLYNSRGKDSDKGVINHLITTAMRNPLGGARWNPYMHPDTYSYLQKGAPPPTFINLPPFERERREKKGAF FAYAVSRIDGNTPEEAKRLIDYAVYASKYLRSEMDAEERVDTLKRFLTPKLSSLLESAVVEKSSGGKELAALGFPIRESE GGQGVPFMVRPASDTASPDKSGTRDWRRSGFYPGGIERFVKSSNGLNKKDAGIWQLISQGVTVTAAGSPAGSGGPHITNT TFWDNRVLLKYLLRGRDLGECFLRSTYHVNWSTSLIGDPLFHPDLNHTIVDETPPRASKGLAIQWAVRDGKATAMVGTEL DFDPSAPEVALMNVTVTAADTQPSTTRTALYSRRPTIAVTGLKPGSSYHFTAELTDPYGNRSVLREVVSAAPGSGQ >Mature_715_residues PLNKFLIVAVFVAITAASALAGDKLKPYAATPDRVLVIYNADWKNRSEGSAAEQDSREVAEYFAAMHADPKSGKKPYLLG LSCRHPGKKHLNDWAIREASTDNRNGIAFRGKGPAPGRGELIRDSRKVEVHISEPDADWETLRISCRSEVTGEEKVVPPI STALQISGIPAKPGNDAVYPPPADGKGRSIRLDATRFFAGTVTVSITLKNHAGTVLRDLKLRYHDIRNFIFSPTGPDNIP DDKILEEDLLTPVRTFLEDPRNALPDGTRLKDHILYIVVVHGVPYAGNGIFGVDHGVTSSWGEHGSLTSVEQRLQTIYYP WATLRPPVISLYNSRGKDSDKGVINHLITTAMRNPLGGARWNPYMHPDTYSYLQKGAPPPTFINLPPFERERREKKGAFF AYAVSRIDGNTPEEAKRLIDYAVYASKYLRSEMDAEERVDTLKRFLTPKLSSLLESAVVEKSSGGKELAALGFPIRESEG GQGVPFMVRPASDTASPDKSGTRDWRRSGFYPGGIERFVKSSNGLNKKDAGIWQLISQGVTVTAAGSPAGSGGPHITNTT FWDNRVLLKYLLRGRDLGECFLRSTYHVNWSTSLIGDPLFHPDLNHTIVDETPPRASKGLAIQWAVRDGKATAMVGTELD FDPSAPEVALMNVTVTAADTQPSTTRTALYSRRPTIAVTGLKPGSSYHFTAELTDPYGNRSVLREVVSAAPGSGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78399; Mature: 78268
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNKFLIVAVFVAITAASALAGDKLKPYAATPDRVLVIYNADWKNRSEGSAAEQDSREV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH AEYFAAMHADPKSGKKPYLLGLSCRHPGKKHLNDWAIREASTDNRNGIAFRGKGPAPGRG HHHHHHHCCCCCCCCCCEEEEEECCCCCHHHCCHHHEECCCCCCCCCEEEECCCCCCCCC ELIRDSRKVEVHISEPDADWETLRISCRSEVTGEEKVVPPISTALQISGIPAKPGNDAVY CEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC PPPADGKGRSIRLDATRFFAGTVTVSITLKNHAGTVLRDLKLRYHDIRNFIFSPTGPDNI CCCCCCCCCEEEEEHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC PDDKILEEDLLTPVRTFLEDPRNALPDGTRLKDHILYIVVVHGVPYAGNGIFGVDHGVTS CCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHEEEEEEEEECCCCCCCCEEECCCCCCC SWGEHGSLTSVEQRLQTIYYPWATLRPPVISLYNSRGKDSDKGVINHLITTAMRNPLGGA CCCCCCCHHHHHHHHHHEECCCHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC RWNPYMHPDTYSYLQKGAPPPTFINLPPFERERREKKGAFFAYAVSRIDGNTPEEAKRLI CCCCCCCCCHHHHHHCCCCCCCEECCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHH DYAVYASKYLRSEMDAEERVDTLKRFLTPKLSSLLESAVVEKSSGGKELAALGFPIRESE HHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEECCCEECCC GGQGVPFMVRPASDTASPDKSGTRDWRRSGFYPGGIERFVKSSNGLNKKDAGIWQLISQG CCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCC VTVTAAGSPAGSGGPHITNTTFWDNRVLLKYLLRGRDLGECFLRSTYHVNWSTSLIGDPL CEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHCCEEEECEEHHHCCCCC FHPDLNHTIVDETPPRASKGLAIQWAVRDGKATAMVGTELDFDPSAPEVALMNVTVTAAD CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEEEECC TQPSTTRTALYSRRPTIAVTGLKPGSSYHFTAELTDPYGNRSVLREVVSAAPGSGQ CCCCHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure PLNKFLIVAVFVAITAASALAGDKLKPYAATPDRVLVIYNADWKNRSEGSAAEQDSREV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH AEYFAAMHADPKSGKKPYLLGLSCRHPGKKHLNDWAIREASTDNRNGIAFRGKGPAPGRG HHHHHHHCCCCCCCCCCEEEEEECCCCCHHHCCHHHEECCCCCCCCCEEEECCCCCCCCC ELIRDSRKVEVHISEPDADWETLRISCRSEVTGEEKVVPPISTALQISGIPAKPGNDAVY CEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC PPPADGKGRSIRLDATRFFAGTVTVSITLKNHAGTVLRDLKLRYHDIRNFIFSPTGPDNI CCCCCCCCCEEEEEHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC PDDKILEEDLLTPVRTFLEDPRNALPDGTRLKDHILYIVVVHGVPYAGNGIFGVDHGVTS CCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHEEEEEEEEECCCCCCCCEEECCCCCCC SWGEHGSLTSVEQRLQTIYYPWATLRPPVISLYNSRGKDSDKGVINHLITTAMRNPLGGA CCCCCCCHHHHHHHHHHEECCCHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC RWNPYMHPDTYSYLQKGAPPPTFINLPPFERERREKKGAFFAYAVSRIDGNTPEEAKRLI CCCCCCCCCHHHHHHCCCCCCCEECCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHH DYAVYASKYLRSEMDAEERVDTLKRFLTPKLSSLLESAVVEKSSGGKELAALGFPIRESE HHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEECCCEECCC GGQGVPFMVRPASDTASPDKSGTRDWRRSGFYPGGIERFVKSSNGLNKKDAGIWQLISQG CCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCC VTVTAAGSPAGSGGPHITNTTFWDNRVLLKYLLRGRDLGECFLRSTYHVNWSTSLIGDPL CEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHCCEEEECEEHHHCCCCC FHPDLNHTIVDETPPRASKGLAIQWAVRDGKATAMVGTELDFDPSAPEVALMNVTVTAAD CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEEEECC TQPSTTRTALYSRRPTIAVTGLKPGSSYHFTAELTDPYGNRSVLREVVSAAPGSGQ CCCCHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA