| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223190
Identifier: 78223190
GI number: 78223190
Start: 2211812
End: 2212615
Strand: Reverse
Name: 78223190
Synonym: Gmet_1983
Alternate gene names: NA
Gene position: 2212615-2211812 (Counterclockwise)
Preceding gene: 78223191
Following gene: 78223189
Centisome position: 55.35
GC content: 56.47
Gene sequence:
>804_bases GTGATCGGGGGAGAGGTGGAGCTCTCTTCCCCGGACCTGACCACAGTTCTCTTTGTTCTGGCCCACGACCCGGACGGCGA GGTCAGTGGCGGAGCACGCAAGTGTCTCGCGGAGCTGCCGGAAGGTGTGCTCCGCGAGGCCGTTTCAGCTCCAGCCCTTC ATCCAAGGATACTTGACGGTTTAGCCCGTCTCTATCTCCGGAACCGGGAAATTGCATCGCTGATAGTCTCACACCCCCAC TGTCCCGAAGAAACCAGGCTGTTTCTTGCCGAACAGGGCATTGAAGTGCCACATCGCACCGTGTCGACCTCCCATAGCAC CGCAGAAGAGGCTGCCCAGGAGTTTCCTGACAATGGCGAGGAGGAAGTCGACGAAGAGAGCGAGGCGTTCCGCGGAAAGT ACCAGTTGGCCCAGGTCATGGGGGTGTCCGACAAAATCAAGATTGCGCAGACAGGCGACAAGGAGTGGCGGATGATCCTT ATCCGTGATTCCAACAAGCTCGTGTCGGGAACCGTTATCAAGAACCCCCGGATTACCGAGCAGGAAGTGCTGACAATCTG CAAGTCGTCGATCCAGAATGACGAAATTCTCCGTGTCATCTGCGCCAACAAGGAATGGATCAAGAACTACCAGATACGTA AGGCGCTTGTGGAGAACAACAAGACGTCGCTTCCGTCGGCCTTGCGCTTCCTGGCAACTCTGAATGAGAAGGATTTGGCC CATCTGGCCAAGAGTAAGGGCATCTCGTCGGTGCTCTCGACCCAGGCGCGGAAGCTGCTTCTCAGTAAGAAAAAGGACAA ATAG
Upstream 100 bases:
>100_bases GTAAAGTAGTGGAGCAGATTCCCTGAAAGTAACGCTGAAAATATCTCCACGGGCTGCCGCCTTCCTTGCTGGCGGCGCAT CGCGCGGGGAAAAGCTGAAG
Downstream 100 bases:
>100_bases GAGGACGGCCGCAATGGCCCTGTTTAACAGAACGAAGCGTGAGATCAACGCTAAGATCGTTTACTTCGGATCTCCCCTTG CCGGCAAGGCCACGACACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MIGGEVELSSPDLTTVLFVLAHDPDGEVSGGARKCLAELPEGVLREAVSAPALHPRILDGLARLYLRNREIASLIVSHPH CPEETRLFLAEQGIEVPHRTVSTSHSTAEEAAQEFPDNGEEEVDEESEAFRGKYQLAQVMGVSDKIKIAQTGDKEWRMIL IRDSNKLVSGTVIKNPRITEQEVLTICKSSIQNDEILRVICANKEWIKNYQIRKALVENNKTSLPSALRFLATLNEKDLA HLAKSKGISSVLSTQARKLLLSKKKDK
Sequences:
>Translated_267_residues MIGGEVELSSPDLTTVLFVLAHDPDGEVSGGARKCLAELPEGVLREAVSAPALHPRILDGLARLYLRNREIASLIVSHPH CPEETRLFLAEQGIEVPHRTVSTSHSTAEEAAQEFPDNGEEEVDEESEAFRGKYQLAQVMGVSDKIKIAQTGDKEWRMIL IRDSNKLVSGTVIKNPRITEQEVLTICKSSIQNDEILRVICANKEWIKNYQIRKALVENNKTSLPSALRFLATLNEKDLA HLAKSKGISSVLSTQARKLLLSKKKDK >Mature_267_residues MIGGEVELSSPDLTTVLFVLAHDPDGEVSGGARKCLAELPEGVLREAVSAPALHPRILDGLARLYLRNREIASLIVSHPH CPEETRLFLAEQGIEVPHRTVSTSHSTAEEAAQEFPDNGEEEVDEESEAFRGKYQLAQVMGVSDKIKIAQTGDKEWRMIL IRDSNKLVSGTVIKNPRITEQEVLTICKSSIQNDEILRVICANKEWIKNYQIRKALVENNKTSLPSALRFLATLNEKDLA HLAKSKGISSVLSTQARKLLLSKKKDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29596; Mature: 29596
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGGEVELSSPDLTTVLFVLAHDPDGEVSGGARKCLAELPEGVLREAVSAPALHPRILDG CCCCCEEECCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LARLYLRNREIASLIVSHPHCPEETRLFLAEQGIEVPHRTVSTSHSTAEEAAQEFPDNGE HHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHCCCCCH EEVDEESEAFRGKYQLAQVMGVSDKIKIAQTGDKEWRMILIRDSNKLVSGTVIKNPRITE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCEEECEEECCCCCCH QEVLTICKSSIQNDEILRVICANKEWIKNYQIRKALVENNKTSLPSALRFLATLNEKDLA HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH HLAKSKGISSVLSTQARKLLLSKKKDK HHHHHCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIGGEVELSSPDLTTVLFVLAHDPDGEVSGGARKCLAELPEGVLREAVSAPALHPRILDG CCCCCEEECCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LARLYLRNREIASLIVSHPHCPEETRLFLAEQGIEVPHRTVSTSHSTAEEAAQEFPDNGE HHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHCCCCCH EEVDEESEAFRGKYQLAQVMGVSDKIKIAQTGDKEWRMILIRDSNKLVSGTVIKNPRITE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCEEECEEECCCCCCH QEVLTICKSSIQNDEILRVICANKEWIKNYQIRKALVENNKTSLPSALRFLATLNEKDLA HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHH HLAKSKGISSVLSTQARKLLLSKKKDK HHHHHCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA