| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is pgsA [H]
Identifier: 78223159
GI number: 78223159
Start: 2179075
End: 2179668
Strand: Reverse
Name: pgsA [H]
Synonym: Gmet_1952
Alternate gene names: 78223159
Gene position: 2179668-2179075 (Counterclockwise)
Preceding gene: 78223160
Following gene: 78223157
Centisome position: 54.53
GC content: 55.22
Gene sequence:
>594_bases ATGCCTGACACTAACGCCAAGACCATCTGGAATATCCCGAACATTCTCACTCTCCTGCGAATCGCTCTGATACCCGTTTT GGCGGTGCTTCTTCTGTCACCGTCCCGGGAAGCGGGATTCTGGGCCGCTGCCGTGTTCGCCGTCGCCTCAACCACCGACT GGCTTGACGGCTATCTAGCCCGCAGGATGGGTATCGTTACTGTCTTCGGCAAGTTCCTTGACCCCATTGCAGACAAGCTC ATGGTGATGGCGGCACTCATCATGATCCTCCCCTACAATCGGGTTCCTGCCTGGATGGTTCTTGTAATCCTCGGCCGCGA GATCATCATTACGGGGCTGCGGGGGATCGCCTCCAGCGAGGGGATTGTCATATCCGCCAGCGATCTGGGAAAGTTCAAGA CCATCTTCCAGATGGTGGCTATCATCGGGCTGCTTCTCCACTATGACTACCACTGGTTTTTCGGGGTCGACAACCCCTAT CTCATCGTCAACATGCACAATGCAGGGATGTTCTATCTCTGGATCGCCACAATTATGACTGTCTGGTCCGGAGCCGACTA CCTTGCCAAGTTCATGAGGGTAATAGCCCGCTGA
Upstream 100 bases:
>100_bases GTATAACGGCATTCCCCCTTATCAGGAAACGCGCACCTATGTCGACAGGGTGCTTACTTACAGAAAATCCTACCAGACCA CCAATTGAGAATCAGCGTAC
Downstream 100 bases:
>100_bases CCATTTCCTAGGTCTTATTTCTCTTCCAGTGCCATAGGCTCACAGACATTGTCCCCTGAATTTGCTTTGGACCCGCAGAT AAAGCAGACGACGGTCGGGT
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPDTNAKTIWNIPNILTLLRIALIPVLAVLLLSPSREAGFWAAAVFAVASTTDWLDGYLARRMGIVTVFGKFLDPIADKL MVMAALIMILPYNRVPAWMVLVILGREIIITGLRGIASSEGIVISASDLGKFKTIFQMVAIIGLLLHYDYHWFFGVDNPY LIVNMHNAGMFYLWIATIMTVWSGADYLAKFMRVIAR
Sequences:
>Translated_197_residues MPDTNAKTIWNIPNILTLLRIALIPVLAVLLLSPSREAGFWAAAVFAVASTTDWLDGYLARRMGIVTVFGKFLDPIADKL MVMAALIMILPYNRVPAWMVLVILGREIIITGLRGIASSEGIVISASDLGKFKTIFQMVAIIGLLLHYDYHWFFGVDNPY LIVNMHNAGMFYLWIATIMTVWSGADYLAKFMRVIAR >Mature_196_residues PDTNAKTIWNIPNILTLLRIALIPVLAVLLLSPSREAGFWAAAVFAVASTTDWLDGYLARRMGIVTVFGKFLDPIADKLM VMAALIMILPYNRVPAWMVLVILGREIIITGLRGIASSEGIVISASDLGKFKTIFQMVAIIGLLLHYDYHWFFGVDNPYL IVNMHNAGMFYLWIATIMTVWSGADYLAKFMRVIAR
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=185, Percent_Identity=37.8378378378378, Blast_Score=104, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6320059, Length=219, Percent_Identity=27.8538812785388, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 22010; Mature: 21879
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTNAKTIWNIPNILTLLRIALIPVLAVLLLSPSREAGFWAAAVFAVASTTDWLDGYLA CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RRMGIVTVFGKFLDPIADKLMVMAALIMILPYNRVPAWMVLVILGREIIITGLRGIASSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GIVISASDLGKFKTIFQMVAIIGLLLHYDYHWFFGVDNPYLIVNMHNAGMFYLWIATIMT CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHHHHHHHHHH VWSGADYLAKFMRVIAR HHCCHHHHHHHHHHHCC >Mature Secondary Structure PDTNAKTIWNIPNILTLLRIALIPVLAVLLLSPSREAGFWAAAVFAVASTTDWLDGYLA CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RRMGIVTVFGKFLDPIADKLMVMAALIMILPYNRVPAWMVLVILGREIIITGLRGIASSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GIVISASDLGKFKTIFQMVAIIGLLLHYDYHWFFGVDNPYLIVNMHNAGMFYLWIATIMT CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHHHHHHHHHH VWSGADYLAKFMRVIAR HHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7750561; 9384377 [H]