| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223158
Identifier: 78223158
GI number: 78223158
Start: 2178872
End: 2179060
Strand: Direct
Name: 78223158
Synonym: Gmet_1951
Alternate gene names: NA
Gene position: 2178872-2179060 (Clockwise)
Preceding gene: 78223156
Following gene: 78223161
Centisome position: 54.51
GC content: 47.62
Gene sequence:
>189_bases ATGGCTGAACAGATGACATGCAGTTGCGGCGAAAAGCACCAAGGACATCTCTGTGTTCTCAAGAGCAAGGGAATGATGAA AGAAGTTAGCCATCTCACTTCAAACCCGACCGTCGTCTGCTTTATCTGCGGGTCCAAAGCAAATTCAGGGGACAATGTCT GTGAGCCTATGGCACTGGAAGAGAAATAA
Upstream 100 bases:
>100_bases TCGGAGGTGACCGCCGACAGCTTGACATACTGTATATTTTACGGCGACAATAGCCTCAGAATTTATCCGTACCAAATCCA TCGTTACCGGGAGGCGATCC
Downstream 100 bases:
>100_bases GACCTAGGAAATGGTCAGCGGGCTATTACCCTCATGAACTTGGCAAGGTAGTCGGCTCCGGACCAGACAGTCATAATTGT GGCGATCCAGAGATAGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MAEQMTCSCGEKHQGHLCVLKSKGMMKEVSHLTSNPTVVCFICGSKANSGDNVCEPMALEEK
Sequences:
>Translated_62_residues MAEQMTCSCGEKHQGHLCVLKSKGMMKEVSHLTSNPTVVCFICGSKANSGDNVCEPMALEEK >Mature_61_residues AEQMTCSCGEKHQGHLCVLKSKGMMKEVSHLTSNPTVVCFICGSKANSGDNVCEPMALEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6689; Mature: 6558
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00022 EGF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.7 %Cys (Translated Protein) 8.1 %Met (Translated Protein) 17.7 %Cys+Met (Translated Protein) 9.8 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 16.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQMTCSCGEKHQGHLCVLKSKGMMKEVSHLTSNPTVVCFICGSKANSGDNVCEPMALE CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC EK CC >Mature Secondary Structure AEQMTCSCGEKHQGHLCVLKSKGMMKEVSHLTSNPTVVCFICGSKANSGDNVCEPMALE CCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC EK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA