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The map label for this gene is nrtC [H]

Identifier: 78223108

GI number: 78223108

Start: 2121374

End: 2122339

Strand: Reverse

Name: nrtC [H]

Synonym: Gmet_1901

Alternate gene names: 78223108

Gene position: 2122339-2121374 (Counterclockwise)

Preceding gene: 78223109

Following gene: 78223107

Centisome position: 53.09

GC content: 57.45

Gene sequence:

>966_bases
ATGAACAGACGCGACTTTCTCAAAACCTCGGGCCTGGCTTTGGCTGCTGCTGCCACTCCCTTCGGCCGTTTCGCCTGGGC
CGGCGGGGCCACACTTTCCCTTAAGATCGGTTATCTCCCCCTCACCGATCACCTCCTCATGATTGCCGCCGAGAGGGAGC
AGTTCAAAAACATCCGCATCAAGCCGGTGAGGTTTTCCTCATGGCCCGAGATCGCCGAAGCCCTGAAGAATGGGAAAATC
GACGGCGGTTTCCTCCTCACTCCCATGGGGTTGGCGCTCCGCCAAAAGGGGGCACCGATCAAAGTGGTGCTCCTGGGGCA
CCGTAATGGCAGCGCCATAACGGTAAAAAATTCACCCGATATCAACCGTATCACGGATTTGCGGGGCAAGACCGTCGCCA
TACCGAGTCCTTTTTCGACTCACAACCTGCTGCTGCGCAAGGCCTTGAGCGAGAAGGGGCTGGTGCCGGGGCGGGACGTG
AAAGTGATAGATATGGCGCCTCCCGAGATGCCGGTTGCACTCGCCACCGGCCGGATCCACGGCTTCATGGTGGCCGAGCC
TTTCGGTGCCCAGGCCGAGGCCCAGAAGGTGGGAAAGATCCTCGTTCTCTCCAAGGATATCTGGAAAGACCACATCTGCT
GCACCCTTAACCTGCAGGAAAAGATAATCCAGAGCTATCCTGCCGAGGTACAGGAACTGGTTACGGGGCTTATCCGTACC
GCTTCTTTCATTGAGTCCAAGCCGGCCGAAGCGGCCAGGGGATCGGTAAAGATTCTCGGCCAGCGCCCGGAGATCGTAGA
GAAAGTCCTCACTACTCCTCAGGATCGCCTCACTTTCCGAAATTTGGCTCCTTCACGGGCAGATTTCGTCGCCATTCAGG
ACTACATGGTGAAGTTTGGGGTTGCGAAAGCCAAGGTGGATCTGACTGGCTATCTGGATGACCGCTTTGCGAAGAGGAAA
GGGTAG

Upstream 100 bases:

>100_bases
CCCGGCTCATGGCGCTCCAGCAGGAGGCGGGCCACGCCCATGCCCACGCCCACGGGCACCCACATCATCACGAACATCCG
TAAAGACGGAGGATATACCC

Downstream 100 bases:

>100_bases
ATCGATGGCTCCCAAGTCAGCACAGCGGGTATTACCGCTTGTATCAGCAGCGGCATTCATCGCAATGTGGCAGGTTGTAG
CCAGATTCTACCCGCCGGAA

Product: twin-arginine translocation pathway signal

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNRRDFLKTSGLALAAAATPFGRFAWAGGATLSLKIGYLPLTDHLLMIAAEREQFKNIRIKPVRFSSWPEIAEALKNGKI
DGGFLLTPMGLALRQKGAPIKVVLLGHRNGSAITVKNSPDINRITDLRGKTVAIPSPFSTHNLLLRKALSEKGLVPGRDV
KVIDMAPPEMPVALATGRIHGFMVAEPFGAQAEAQKVGKILVLSKDIWKDHICCTLNLQEKIIQSYPAEVQELVTGLIRT
ASFIESKPAEAARGSVKILGQRPEIVEKVLTTPQDRLTFRNLAPSRADFVAIQDYMVKFGVAKAKVDLTGYLDDRFAKRK
G

Sequences:

>Translated_321_residues
MNRRDFLKTSGLALAAAATPFGRFAWAGGATLSLKIGYLPLTDHLLMIAAEREQFKNIRIKPVRFSSWPEIAEALKNGKI
DGGFLLTPMGLALRQKGAPIKVVLLGHRNGSAITVKNSPDINRITDLRGKTVAIPSPFSTHNLLLRKALSEKGLVPGRDV
KVIDMAPPEMPVALATGRIHGFMVAEPFGAQAEAQKVGKILVLSKDIWKDHICCTLNLQEKIIQSYPAEVQELVTGLIRT
ASFIESKPAEAARGSVKILGQRPEIVEKVLTTPQDRLTFRNLAPSRADFVAIQDYMVKFGVAKAKVDLTGYLDDRFAKRK
G
>Mature_321_residues
MNRRDFLKTSGLALAAAATPFGRFAWAGGATLSLKIGYLPLTDHLLMIAAEREQFKNIRIKPVRFSSWPEIAEALKNGKI
DGGFLLTPMGLALRQKGAPIKVVLLGHRNGSAITVKNSPDINRITDLRGKTVAIPSPFSTHNLLLRKALSEKGLVPGRDV
KVIDMAPPEMPVALATGRIHGFMVAEPFGAQAEAQKVGKILVLSKDIWKDHICCTLNLQEKIIQSYPAEVQELVTGLIRT
ASFIESKPAEAARGSVKILGQRPEIVEKVLTTPQDRLTFRNLAPSRADFVAIQDYMVKFGVAKAKVDLTGYLDDRFAKRK
G

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35114; Mature: 35114

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRDFLKTSGLALAAAATPFGRFAWAGGATLSLKIGYLPLTDHLLMIAAEREQFKNIRI
CCCHHHHHHCCEEEEEECCCCCCEEECCCCEEEEEEEEEECCCCEEEEEECHHHHCCCEE
KPVRFSSWPEIAEALKNGKIDGGFLLTPMGLALRQKGAPIKVVLLGHRNGSAITVKNSPD
EEEECCCCHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCEEEEEEECCCCCEEEECCCCC
INRITDLRGKTVAIPSPFSTHNLLLRKALSEKGLVPGRDVKVIDMAPPEMPVALATGRIH
CHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCEE
GFMVAEPFGAQAEAQKVGKILVLSKDIWKDHICCTLNLQEKIIQSYPAEVQELVTGLIRT
EEEEECCCCCCHHHHHCCEEEEEECCCCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHH
ASFIESKPAEAARGSVKILGQRPEIVEKVLTTPQDRLTFRNLAPSRADFVAIQDYMVKFG
HHHHHCCCCHHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHC
VAKAKVDLTGYLDDRFAKRKG
CEEEEEEEEECHHHHHHHCCC
>Mature Secondary Structure
MNRRDFLKTSGLALAAAATPFGRFAWAGGATLSLKIGYLPLTDHLLMIAAEREQFKNIRI
CCCHHHHHHCCEEEEEECCCCCCEEECCCCEEEEEEEEEECCCCEEEEEECHHHHCCCEE
KPVRFSSWPEIAEALKNGKIDGGFLLTPMGLALRQKGAPIKVVLLGHRNGSAITVKNSPD
EEEECCCCHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCEEEEEEECCCCCEEEECCCCC
INRITDLRGKTVAIPSPFSTHNLLLRKALSEKGLVPGRDVKVIDMAPPEMPVALATGRIH
CHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCEE
GFMVAEPFGAQAEAQKVGKILVLSKDIWKDHICCTLNLQEKIIQSYPAEVQELVTGLIRT
EEEEECCCCCCHHHHHCCEEEEEECCCCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHH
ASFIESKPAEAARGSVKILGQRPEIVEKVLTTPQDRLTFRNLAPSRADFVAIQDYMVKFG
HHHHHCCCCHHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHC
VAKAKVDLTGYLDDRFAKRKG
CEEEEEEEEECHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]