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The map label for this gene is 78223069

Identifier: 78223069

GI number: 78223069

Start: 2074921

End: 2075460

Strand: Reverse

Name: 78223069

Synonym: Gmet_1862

Alternate gene names: NA

Gene position: 2075460-2074921 (Counterclockwise)

Preceding gene: 78223070

Following gene: 78223068

Centisome position: 51.92

GC content: 50.56

Gene sequence:

>540_bases
ATGGATCTGAAGATCAATCTTTCGACTCGCTATTTTATTGATACGCGGAAATTGAATGCTGCATTGGCCGCTGCTGTCGC
CCTGCTGGTGCTGGTCCTGTTCTTCGTTGTCAAAGGGGTCGCCACGAACGCCGGTCAGGCAAAGCAACTTGAAGGTGAAC
TGGCGAAACTTCAGGAACGATTTGCGACATCGGCCAAGGGAGTGACAGAGCAGGAGTATCAGGGAATCATAAAGAAAATT
TCAGTCGCCAATGGAATCCTCAAGAAAAGAGGGCTTAATTGGCTCCTTCTGCTCGATCAGTTGGAGTCTGTAGTGCCCGA
TGGCGTTACTCTTTCATCCATAGAGCCGAAACTCAAAGAGGGGACCCTGACGCTCGCTGGAACTGCGAAGGAATTTCGCA
ATTTGAGGACCTTTGTGGAAAATCTCGAAGGAGCCCCCCGGTTTTCCGACGTGTTTCTCCAGAGCCAGACAGAAGTCAAA
GAGGGAACTGATCAGAGGGGCGTGGGATTCACCGTTACGTGCAAGGTGGATTTCCTATGA

Upstream 100 bases:

>100_bases
CGGATACGTTCGTTGGCAATCCGGCCTCTTCCGTGGGGGGTGGTGGGGTGCCATTGGCTTCCTTGGCAGCTGCCCTTGGT
GCTGCAACGAGGAATCTCTG

Downstream 100 bases:

>100_bases
CCAGAAATCAGTTTCTGGAGGTCCTTAAGGCCAAGCGGATGTCAATTGCCGTGATCCTCGTTCTCATTCTGGTGAATATG
GGGATCGTGATGTACTCCCA

Product: fimbrial assembly

Products: NA

Alternate protein names: Fimbrial Assembly; Type II Secretion System Protein PulN

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MDLKINLSTRYFIDTRKLNAALAAAVALLVLVLFFVVKGVATNAGQAKQLEGELAKLQERFATSAKGVTEQEYQGIIKKI
SVANGILKKRGLNWLLLLDQLESVVPDGVTLSSIEPKLKEGTLTLAGTAKEFRNLRTFVENLEGAPRFSDVFLQSQTEVK
EGTDQRGVGFTVTCKVDFL

Sequences:

>Translated_179_residues
MDLKINLSTRYFIDTRKLNAALAAAVALLVLVLFFVVKGVATNAGQAKQLEGELAKLQERFATSAKGVTEQEYQGIIKKI
SVANGILKKRGLNWLLLLDQLESVVPDGVTLSSIEPKLKEGTLTLAGTAKEFRNLRTFVENLEGAPRFSDVFLQSQTEVK
EGTDQRGVGFTVTCKVDFL
>Mature_179_residues
MDLKINLSTRYFIDTRKLNAALAAAVALLVLVLFFVVKGVATNAGQAKQLEGELAKLQERFATSAKGVTEQEYQGIIKKI
SVANGILKKRGLNWLLLLDQLESVVPDGVTLSSIEPKLKEGTLTLAGTAKEFRNLRTFVENLEGAPRFSDVFLQSQTEVK
EGTDQRGVGFTVTCKVDFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19604; Mature: 19604

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKINLSTRYFIDTRKLNAALAAAVALLVLVLFFVVKGVATNAGQAKQLEGELAKLQER
CCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FATSAKGVTEQEYQGIIKKISVANGILKKRGLNWLLLLDQLESVVPDGVTLSSIEPKLKE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECCCCCCHHC
GTLTLAGTAKEFRNLRTFVENLEGAPRFSDVFLQSQTEVKEGTDQRGVGFTVTCKVDFL
CCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MDLKINLSTRYFIDTRKLNAALAAAVALLVLVLFFVVKGVATNAGQAKQLEGELAKLQER
CCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FATSAKGVTEQEYQGIIKKISVANGILKKRGLNWLLLLDQLESVVPDGVTLSSIEPKLKE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECCCCCCHHC
GTLTLAGTAKEFRNLRTFVENLEGAPRFSDVFLQSQTEVKEGTDQRGVGFTVTCKVDFL
CCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA