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The map label for this gene is ygfS [C]

Identifier: 78223010

GI number: 78223010

Start: 2019008

End: 2019544

Strand: Direct

Name: ygfS [C]

Synonym: Gmet_1803

Alternate gene names: 78223010

Gene position: 2019008-2019544 (Clockwise)

Preceding gene: 78223009

Following gene: 78223011

Centisome position: 50.51

GC content: 56.98

Gene sequence:

>537_bases
ATGGCCAAAATTAAACGGAAAGTCAGGACGATCACGGTTGATGCCGACAAGTGCAACGGCTGCCGGACCTGCGAAATCAT
GTGCTCCGCCTTCCACGCGGTTCCGCCGTACAGCAGCAACAACCCGGCACGGTCGCGCATCCAGGTCATCACCAACCGGC
TCGAGGACATCTGGATGCCGGTCTTTGCCGGCGAGTACACCGAATCCGAGTGCATGGGGCGGAACAAGTACATCATCGAC
GGCAAGGAATACAACGAGTGCGACTCCTGCCGTGCCGCCTGCCCCTCACGGGATCTGTTCAAGGAACCGGATTCGGGTCT
GCCCCTGAAATGCGACATGTGCGACGGCGAAGATGAGCCGGTATGTGTCAAGTGGTGCCTGGTCGATGCCCTAGTCTACG
AGGAGCGGGAAGAGGAAGTGGAAGAGAAGGATATACAAACAACGGTGACCGAGATGGAGGTCGGTCTGGAATCGCTGGTG
CGAAAACATGGTTTCGACAAGGTAATGGATACGGTTGCCCGAATGTCGAAGAAGTGA

Upstream 100 bases:

>100_bases
AAGGGATGGAACCACGACGGCATTCCCACACGGGAAAAGCTGGAAGAACTGGACCTGGGCTATGTCGCCGACGACCTGGA
AAAGAGGGGGATCTTGAAAA

Downstream 100 bases:

>100_bases
TACTACTTCCGGGCGCAAGAACGGGTAGCATGATACTCCCCCCGGCAGGGCCGGGGGGACCACAACATGCGTCCAACATG
GAAGCTGAACGGATTTTGGA

Product: 4Fe-4S ferredoxin, iron-sulfur binding protein

Products: NA

Alternate protein names: Ferredoxin

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MAKIKRKVRTITVDADKCNGCRTCEIMCSAFHAVPPYSSNNPARSRIQVITNRLEDIWMPVFAGEYTESECMGRNKYIID
GKEYNECDSCRAACPSRDLFKEPDSGLPLKCDMCDGEDEPVCVKWCLVDALVYEEREEEVEEKDIQTTVTEMEVGLESLV
RKHGFDKVMDTVARMSKK

Sequences:

>Translated_178_residues
MAKIKRKVRTITVDADKCNGCRTCEIMCSAFHAVPPYSSNNPARSRIQVITNRLEDIWMPVFAGEYTESECMGRNKYIID
GKEYNECDSCRAACPSRDLFKEPDSGLPLKCDMCDGEDEPVCVKWCLVDALVYEEREEEVEEKDIQTTVTEMEVGLESLV
RKHGFDKVMDTVARMSKK
>Mature_177_residues
AKIKRKVRTITVDADKCNGCRTCEIMCSAFHAVPPYSSNNPARSRIQVITNRLEDIWMPVFAGEYTESECMGRNKYIIDG
KEYNECDSCRAACPSRDLFKEPDSGLPLKCDMCDGEDEPVCVKWCLVDALVYEEREEEVEEKDIQTTVTEMEVGLESLVR
KHGFDKVMDTVARMSKK

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20295; Mature: 20164

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
11.2 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIKRKVRTITVDADKCNGCRTCEIMCSAFHAVPPYSSNNPARSRIQVITNRLEDIWMP
CCCHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VFAGEYTESECMGRNKYIIDGKEYNECDSCRAACPSRDLFKEPDSGLPLKCDMCDGEDEP
HHCCCCCHHHHCCCCCEEECCCCCCCHHHHHHCCCCCHHHCCCCCCCCEEEECCCCCCCC
VCVKWCLVDALVYEEREEEVEEKDIQTTVTEMEVGLESLVRKHGFDKVMDTVARMSKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKIKRKVRTITVDADKCNGCRTCEIMCSAFHAVPPYSSNNPARSRIQVITNRLEDIWMP
CCHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VFAGEYTESECMGRNKYIIDGKEYNECDSCRAACPSRDLFKEPDSGLPLKCDMCDGEDEP
HHCCCCCHHHHCCCCCEEECCCCCCCHHHHHHCCCCCHHHCCCCCCCCEEEECCCCCCCC
VCVKWCLVDALVYEEREEEVEEKDIQTTVTEMEVGLESLVRKHGFDKVMDTVARMSKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA