| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is zntR [C]
Identifier: 78222933
GI number: 78222933
Start: 1940435
End: 1940839
Strand: Direct
Name: zntR [C]
Synonym: Gmet_1724
Alternate gene names: 78222933
Gene position: 1940435-1940839 (Clockwise)
Preceding gene: 78222927
Following gene: 78222934
Centisome position: 48.54
GC content: 50.12
Gene sequence:
>405_bases ATGGCTCCCGAACAAGAAGCCGAGCAGTTGATTACGATTGGTGAAGTGGCAAGAATGCTGGATTTGACCACCAGGACCCT CAGGTACTGGGAGGAGATGGGGGTCGTCGAGGCCTCACACCGTTCTGAGGGAGGAAACCGTCTCTATACGCCGTACATGG TCCGACGGATGAAGTTCATCATCAAGCTCAAGGAGTTAGGCCTGACGATCAAGGAGATGCAGGAACTCGGCGCGGCGTAC GGCGAGGCAAGGAAGACGGAAAACATGATACCGCGCCTGGTCGAAATACTGGACAGTCATATCAACAAGGTCGATGAAAA GATGGCGAATCTTGCTTCCCTTCGTAAGGATATTGTTGATTATCGTCATCGTATGATCGAGAAGTTCAATTTTAGCAAAA AATGA
Upstream 100 bases:
>100_bases TTTGTACGGTAATATGTATATTAGTCGGATTCGCGGGAATTGACAGGCAGGGGTAATTGGCGTATTGAATGGTTAATAAT TCACGTAAAGGGGAGAAACT
Downstream 100 bases:
>100_bases CCTCTTGCGGCATAGTCCTTAATGTACTCCTTGAAAGTCTTGCGAACCAGGGTGGTATGAACACTCTCGCCATGTTCTGC ACCTCCATCCAAACGTTTCG
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Zinc-Responsive Transcriptional Regulator; MerR Family Helix-Turn-Helix Transcriptional Regulator; Cd(II)/Pb(II)-Responsive Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulatory Protein; Transcription Regulator Family Protein; Regulatory Protein MerR
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAPEQEAEQLITIGEVARMLDLTTRTLRYWEEMGVVEASHRSEGGNRLYTPYMVRRMKFIIKLKELGLTIKEMQELGAAY GEARKTENMIPRLVEILDSHINKVDEKMANLASLRKDIVDYRHRMIEKFNFSKK
Sequences:
>Translated_134_residues MAPEQEAEQLITIGEVARMLDLTTRTLRYWEEMGVVEASHRSEGGNRLYTPYMVRRMKFIIKLKELGLTIKEMQELGAAY GEARKTENMIPRLVEILDSHINKVDEKMANLASLRKDIVDYRHRMIEKFNFSKK >Mature_133_residues APEQEAEQLITIGEVARMLDLTTRTLRYWEEMGVVEASHRSEGGNRLYTPYMVRRMKFIIKLKELGLTIKEMQELGAAYG EARKTENMIPRLVEILDSHINKVDEKMANLASLRKDIVDYRHRMIEKFNFSKK
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15705; Mature: 15573
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPEQEAEQLITIGEVARMLDLTTRTLRYWEEMGVVEASHRSEGGNRLYTPYMVRRMKFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHH IKLKELGLTIKEMQELGAAYGEARKTENMIPRLVEILDSHINKVDEKMANLASLRKDIVD HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRHRMIEKFNFSKK HHHHHHHHHCCCCC >Mature Secondary Structure APEQEAEQLITIGEVARMLDLTTRTLRYWEEMGVVEASHRSEGGNRLYTPYMVRRMKFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHH IKLKELGLTIKEMQELGAAYGEARKTENMIPRLVEILDSHINKVDEKMANLASLRKDIVD HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRHRMIEKFNFSKK HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA