| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222856
Identifier: 78222856
GI number: 78222856
Start: 1849265
End: 1850833
Strand: Direct
Name: 78222856
Synonym: Gmet_1647
Alternate gene names: NA
Gene position: 1849265-1850833 (Clockwise)
Preceding gene: 78222855
Following gene: 78222857
Centisome position: 46.26
GC content: 58.06
Gene sequence:
>1569_bases GTGACAAGAAAACCATTAGCCATTGCGATATTGACTGCTGCACTGTTCATTGCAGCTGTTTCATGTTTCGCGAAAGATAC ACAGAACGTGGCGGCGGGGCGTGACATCTGGTTTAAGAGCACTTTCGGCGGTGAACGATTTTTCAGCCTTATCCTCCCCA ATCCTCCCTTCAATCTCCCACTTGGTTTTGACCAGATGCTGACTTGGCCCCGCGACACCCGCTTCAACGAGTTCGGGGTC ATCAATGATCCGGACTGCACCCCTGGTGACGCCTCGACCGGCAACTATGACCGGTGTGCAGATCCAGGGTCCGCGGGCGT GATCGGAATCCGCAAGTTCCCCAATCCTTCAGGAGGCGCTCCTCTCATCGGCGTTACCTGTGCCGCCTGCCATGCCGGAT TTGACCCCAATCATCCCCCCGCTGACCCGAACCATCCGAAGGCTGAAAACATCCACCCCACCATAGGAAATCAGTATCTG GATATCGGGAAAATTTTCAGGGCCCACCTCTCGCCCCATGACCCACGCTATCAGGTGTTTTCCAGTTGGGCGCCCGGCAC GGTGGACACGACGGTTCTGGAAAATGATCACATCAACAATCCGGGAATGATCACGCCGATCTGGGATGTTCCGGATCGTC CGTTCTTTGATGTCACAGTTGGCGGTGTTCCTGTCCGTGCCCATCGCAACGGGCAGGGAGGTGAAGATGATGCCGGCTGC GAAGCAGCTGCGCTCCGCGTTTACTTCAACATCGGCATGTGCGCTGCGGAATGCATGGTCGGGCACCTCGCCAACGGACC GGGAGGGAGTCAAACTCCCATTGATCTTGCCGAGTGCAGGAAAGTCTGTCCTGATCTCGTGGAGGCGGAGGGGGCTGTCG GGAAGCTCTGTGCCTTTCTCCAGACTCCCCGTTCTCCGCGCCTGGTGAACGCGCCGGATGGCCCTCGTCTTGTCGACTGG AAGGTCGTCGAAAAGGGAAAGCAGGTCTTCTTCAACGCGTGCGGATCGTGCCACTCGGACGGAGACCAGTCAGTAGCGCA CAATGTTCTCACCGACGATCTGATCCATCCTTACTCGGAAATCGGCACGAACAGTTGCCGTGCCCGCACGACGAACTGGA TGGCAGGGCACATCTGGGCAGCGTTCTCATCGGACCAGTACAAGGAGCGGCCCACCGGCGGCCCCGGCTTCTACCGCGAC ATGCCGCTTGTCGGTATCTGGGCGACCGCCCCCTTCTTCCACAATGACAGGCTGGGCCTCTATAATGGCGACCCGTCAGT GGCCGGTCGAATCGCAGCCTATGAGAATGCGATGGAACTGCTTCTGAATCCGGATAAGCGGGACGAAGCCGGTTCGATCC TGAGGACCAATGTTGTCGTGCAACTTCCGACTCCGTCAGGTGTCGTGACGCTCCCGGCCGGGACTCCTGTTGCCGCGTTC GCCAATGTCGACCCTGCAAGCGGCGACAACCTTTGCCCGGATCTCATCGAAAACGAGGGACACTATTTCGGCGCTGATCT TTCTGCGGAAGATAAGTATGCGCTGACGGAGTTCTTGAAGACGCAATGA
Upstream 100 bases:
>100_bases GAAGGGAGGTGACGGGAAGAGAGGTTGTTTGATCATCACGTCTGGCCAGGAAGGCCAAGAAACTCCGCACGCGGGAGCCC TGTATCCAAGGAGGATAAAC
Downstream 100 bases:
>100_bases CGGGGAGATACGAAATTGAAGGGGGGTGGCGCGCCCGGAGAGATTCGAACTCCCGACACCCAGGTTCGAAGCCTGGTGCT CTATCCAGCTGAGCTACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MTRKPLAIAILTAALFIAAVSCFAKDTQNVAAGRDIWFKSTFGGERFFSLILPNPPFNLPLGFDQMLTWPRDTRFNEFGV INDPDCTPGDASTGNYDRCADPGSAGVIGIRKFPNPSGGAPLIGVTCAACHAGFDPNHPPADPNHPKAENIHPTIGNQYL DIGKIFRAHLSPHDPRYQVFSSWAPGTVDTTVLENDHINNPGMITPIWDVPDRPFFDVTVGGVPVRAHRNGQGGEDDAGC EAAALRVYFNIGMCAAECMVGHLANGPGGSQTPIDLAECRKVCPDLVEAEGAVGKLCAFLQTPRSPRLVNAPDGPRLVDW KVVEKGKQVFFNACGSCHSDGDQSVAHNVLTDDLIHPYSEIGTNSCRARTTNWMAGHIWAAFSSDQYKERPTGGPGFYRD MPLVGIWATAPFFHNDRLGLYNGDPSVAGRIAAYENAMELLLNPDKRDEAGSILRTNVVVQLPTPSGVVTLPAGTPVAAF ANVDPASGDNLCPDLIENEGHYFGADLSAEDKYALTEFLKTQ
Sequences:
>Translated_522_residues MTRKPLAIAILTAALFIAAVSCFAKDTQNVAAGRDIWFKSTFGGERFFSLILPNPPFNLPLGFDQMLTWPRDTRFNEFGV INDPDCTPGDASTGNYDRCADPGSAGVIGIRKFPNPSGGAPLIGVTCAACHAGFDPNHPPADPNHPKAENIHPTIGNQYL DIGKIFRAHLSPHDPRYQVFSSWAPGTVDTTVLENDHINNPGMITPIWDVPDRPFFDVTVGGVPVRAHRNGQGGEDDAGC EAAALRVYFNIGMCAAECMVGHLANGPGGSQTPIDLAECRKVCPDLVEAEGAVGKLCAFLQTPRSPRLVNAPDGPRLVDW KVVEKGKQVFFNACGSCHSDGDQSVAHNVLTDDLIHPYSEIGTNSCRARTTNWMAGHIWAAFSSDQYKERPTGGPGFYRD MPLVGIWATAPFFHNDRLGLYNGDPSVAGRIAAYENAMELLLNPDKRDEAGSILRTNVVVQLPTPSGVVTLPAGTPVAAF ANVDPASGDNLCPDLIENEGHYFGADLSAEDKYALTEFLKTQ >Mature_521_residues TRKPLAIAILTAALFIAAVSCFAKDTQNVAAGRDIWFKSTFGGERFFSLILPNPPFNLPLGFDQMLTWPRDTRFNEFGVI NDPDCTPGDASTGNYDRCADPGSAGVIGIRKFPNPSGGAPLIGVTCAACHAGFDPNHPPADPNHPKAENIHPTIGNQYLD IGKIFRAHLSPHDPRYQVFSSWAPGTVDTTVLENDHINNPGMITPIWDVPDRPFFDVTVGGVPVRAHRNGQGGEDDAGCE AAALRVYFNIGMCAAECMVGHLANGPGGSQTPIDLAECRKVCPDLVEAEGAVGKLCAFLQTPRSPRLVNAPDGPRLVDWK VVEKGKQVFFNACGSCHSDGDQSVAHNVLTDDLIHPYSEIGTNSCRARTTNWMAGHIWAAFSSDQYKERPTGGPGFYRDM PLVGIWATAPFFHNDRLGLYNGDPSVAGRIAAYENAMELLLNPDKRDEAGSILRTNVVVQLPTPSGVVTLPAGTPVAAFA NVDPASGDNLCPDLIENEGHYFGADLSAEDKYALTEFLKTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56156; Mature: 56024
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKPLAIAILTAALFIAAVSCFAKDTQNVAAGRDIWFKSTFGGERFFSLILPNPPFNLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCC LGFDQMLTWPRDTRFNEFGVINDPDCTPGDASTGNYDRCADPGSAGVIGIRKFPNPSGGA CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC PLIGVTCAACHAGFDPNHPPADPNHPKAENIHPTIGNQYLDIGKIFRAHLSPHDPRYQVF CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH SSWAPGTVDTTVLENDHINNPGMITPIWDVPDRPFFDVTVGGVPVRAHRNGQGGEDDAGC HCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCCCCCCCC EAAALRVYFNIGMCAAECMVGHLANGPGGSQTPIDLAECRKVCPDLVEAEGAVGKLCAFL CCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCHHHHHCCCHHHHHHHHH QTPRSPRLVNAPDGPRLVDWKVVEKGKQVFFNACGSCHSDGDQSVAHNVLTDDLIHPYSE HCCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHH IGTNSCRARTTNWMAGHIWAAFSSDQYKERPTGGPGFYRDMPLVGIWATAPFFHNDRLGL HCCCCCCCCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEECCEEECCCCEE YNGDPSVAGRIAAYENAMELLLNPDKRDEAGSILRTNVVVQLPTPSGVVTLPAGTPVAAF ECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCEEEE ANVDPASGDNLCPDLIENEGHYFGADLSAEDKYALTEFLKTQ ECCCCCCCCCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure TRKPLAIAILTAALFIAAVSCFAKDTQNVAAGRDIWFKSTFGGERFFSLILPNPPFNLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCC LGFDQMLTWPRDTRFNEFGVINDPDCTPGDASTGNYDRCADPGSAGVIGIRKFPNPSGGA CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC PLIGVTCAACHAGFDPNHPPADPNHPKAENIHPTIGNQYLDIGKIFRAHLSPHDPRYQVF CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH SSWAPGTVDTTVLENDHINNPGMITPIWDVPDRPFFDVTVGGVPVRAHRNGQGGEDDAGC HCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCCCCCCCC EAAALRVYFNIGMCAAECMVGHLANGPGGSQTPIDLAECRKVCPDLVEAEGAVGKLCAFL CCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCHHHHHCCCHHHHHHHHH QTPRSPRLVNAPDGPRLVDWKVVEKGKQVFFNACGSCHSDGDQSVAHNVLTDDLIHPYSE HCCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHH IGTNSCRARTTNWMAGHIWAAFSSDQYKERPTGGPGFYRDMPLVGIWATAPFFHNDRLGL HCCCCCCCCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCCCCEEEEEEECCEEECCCCEE YNGDPSVAGRIAAYENAMELLLNPDKRDEAGSILRTNVVVQLPTPSGVVTLPAGTPVAAF ECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCEEEE ANVDPASGDNLCPDLIENEGHYFGADLSAEDKYALTEFLKTQ ECCCCCCCCCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA