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The map label for this gene is rpmF

Identifier: 78222807

GI number: 78222807

Start: 1798827

End: 1799009

Strand: Direct

Name: rpmF

Synonym: Gmet_1597

Alternate gene names: 78222807

Gene position: 1798827-1799009 (Clockwise)

Preceding gene: 78222806

Following gene: 78222808

Centisome position: 45.0

GC content: 54.1

Gene sequence:

>183_bases
ATGGCAGTACCTAAGAAGAAAACGTCGAAATCCCGCAAAAACATGAGAAGGGCACACGATTTCCTTACTCCGCCGGCCGC
TTCGGTCTGCCCCCAGTGCAAAGCGCCGAAGCTCCCCCACCGCGCATGCTCCTCATGCGGTACCTACAAGGGCAAAGAAG
TCATCAAGAGCGAAGAGATTTAA

Upstream 100 bases:

>100_bases
GACCTTAATGAAGGTGAGTGTGGTTGCGAGCGTACTACGTTCAATGTCAAGTTTAGTGCGCTCAAGAATTTTAAGGTAGA
AAAGTAAAAGGAGAAATATC

Downstream 100 bases:

>100_bases
TAGCTCCTTGTCTGGCCTGACTCATCATTGTCCAGGGGTATCATGAGAGTAGCGGTTGATGCAATGGGGGGCGACAACGC
TCCTTCGGTTGAGGTTGAGG

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MAVPKKKTSKSRKNMRRAHDFLTPPAASVCPQCKAPKLPHRACSSCGTYKGKEVIKSEEI

Sequences:

>Translated_60_residues
MAVPKKKTSKSRKNMRRAHDFLTPPAASVCPQCKAPKLPHRACSSCGTYKGKEVIKSEEI
>Mature_59_residues
AVPKKKTSKSRKNMRRAHDFLTPPAASVCPQCKAPKLPHRACSSCGTYKGKEVIKSEEI

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_GEOMG (Q39V95)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_384554.1
- ProteinModelPortal:   Q39V95
- SMR:   Q39V95
- STRING:   Q39V95
- GeneID:   3741613
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_1597
- NMPDR:   fig|269799.3.peg.1436
- eggNOG:   COG0333
- HOGENOM:   HBG728381
- OMA:   MAKHPVP
- ProtClustDB:   PRK12286
- BioCyc:   GMET269799:GMET_1597-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6628; Mature: 6497

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKKKTSKSRKNMRRAHDFLTPPAASVCPQCKAPKLPHRACSSCGTYKGKEVIKSEEI
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHCCCC
>Mature Secondary Structure 
AVPKKKTSKSRKNMRRAHDFLTPPAASVCPQCKAPKLPHRACSSCGTYKGKEVIKSEEI
CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA