| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222757
Identifier: 78222757
GI number: 78222757
Start: 1749857
End: 1750762
Strand: Reverse
Name: 78222757
Synonym: Gmet_1545
Alternate gene names: NA
Gene position: 1750762-1749857 (Counterclockwise)
Preceding gene: 78222758
Following gene: 78222756
Centisome position: 43.8
GC content: 57.73
Gene sequence:
>906_bases ATGGGAAAGGTTCGCATAGCGTTGGTGGCAATCCTTGTTCTGATTGCCTTGGCTGGCTGCTCCAAAGAGCAGAAAAACGT CCCAGGGAAACAGGTCCGCGTTTCGGCCACTGGGGCATATGAGAAGTATTTCGGCCCCGCTCCGACCACCGACAAGGGAA CCTGCTACGCTTTCGTCATCTATTTCCCCTCAGCAAAAGAGCCGGGCAAGGTGGTCCCGTTTCCGTTCTTCACCTTCGAT CAAAGTTCCTTGAAGAAGGTGGCGGTCGAGCGTCTGCTAGGAGGCATGGATGTGGGGAGTTACAAGGGTGAATTCCTCCA GCTATTTGCTCCCGGCACGCGCATCCTCGGCCTTGCCGAGCAAAATGACGCCGTAACCGTGAACTTCAGCAAGGAAATCC TTGCTGCAAAAGCCGATGCCGTGGTTGAAAAGGCCCTGCTCGATGCGGTCGCCCTCACCCTTTCCCAGTTCAGCGGGGTT CGGGAGGTGCGGATGCAGATCGAAGGAAAAGAAAGCGGCACCGTGGACGGCAAAGACGTCGCGATGTTCCTCGGCCATGG AGGTCCGCTGAAACCGCAGGAAAGCGCCGTCCTCCACCCCTCTCCCCCTCGCCTTCTGAGCGTCACTGCCATGAAGGAGA AGGGGGCAAAGGAGGTAGAAGAGGTGAATGTCTTCTTCGACCGGCCGCTGGAGATCAAGGAGTTGAACATAGCCGGGGGA GACAACAAGCGATTCGACGGCGAAGTCTATCACTCGGTCTTCGATATGGCGGCGGTTTTGAAGCCGAAGGCCCCCTCCCT GTTCAAAGCCGGAATGCCGGTAAAGGTCCGCTGGAAGGTAACCGACAAGGTCGGCCGTTCTGCTGAAGGAGCCGGCGAGT TTCCGCTGGAAGTGCAGGAGCACTGA
Upstream 100 bases:
>100_bases GCCAAGTTCTGGTACGTGGTGAAGTAAGAAAGATCGGCGTCAAGTCGGCACCAGGGGTGACCGGTTATCCGGTTGCCCCT TTTTCCACCGGGAGTGCCTT
Downstream 100 bases:
>100_bases TACGATTCAGGAGAGAACACGAATGATGAAGAAAGCAACAATGCTGGCGGCGTGCATTCTTCTGCTGACACAGGGGGGAG CTCTCGCTCACGGAGGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MGKVRIALVAILVLIALAGCSKEQKNVPGKQVRVSATGAYEKYFGPAPTTDKGTCYAFVIYFPSAKEPGKVVPFPFFTFD QSSLKKVAVERLLGGMDVGSYKGEFLQLFAPGTRILGLAEQNDAVTVNFSKEILAAKADAVVEKALLDAVALTLSQFSGV REVRMQIEGKESGTVDGKDVAMFLGHGGPLKPQESAVLHPSPPRLLSVTAMKEKGAKEVEEVNVFFDRPLEIKELNIAGG DNKRFDGEVYHSVFDMAAVLKPKAPSLFKAGMPVKVRWKVTDKVGRSAEGAGEFPLEVQEH
Sequences:
>Translated_301_residues MGKVRIALVAILVLIALAGCSKEQKNVPGKQVRVSATGAYEKYFGPAPTTDKGTCYAFVIYFPSAKEPGKVVPFPFFTFD QSSLKKVAVERLLGGMDVGSYKGEFLQLFAPGTRILGLAEQNDAVTVNFSKEILAAKADAVVEKALLDAVALTLSQFSGV REVRMQIEGKESGTVDGKDVAMFLGHGGPLKPQESAVLHPSPPRLLSVTAMKEKGAKEVEEVNVFFDRPLEIKELNIAGG DNKRFDGEVYHSVFDMAAVLKPKAPSLFKAGMPVKVRWKVTDKVGRSAEGAGEFPLEVQEH >Mature_300_residues GKVRIALVAILVLIALAGCSKEQKNVPGKQVRVSATGAYEKYFGPAPTTDKGTCYAFVIYFPSAKEPGKVVPFPFFTFDQ SSLKKVAVERLLGGMDVGSYKGEFLQLFAPGTRILGLAEQNDAVTVNFSKEILAAKADAVVEKALLDAVALTLSQFSGVR EVRMQIEGKESGTVDGKDVAMFLGHGGPLKPQESAVLHPSPPRLLSVTAMKEKGAKEVEEVNVFFDRPLEIKELNIAGGD NKRFDGEVYHSVFDMAAVLKPKAPSLFKAGMPVKVRWKVTDKVGRSAEGAGEFPLEVQEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32502; Mature: 32371
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVRIALVAILVLIALAGCSKEQKNVPGKQVRVSATGAYEKYFGPAPTTDKGTCYAFVI CCCHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCEEEEEE YFPSAKEPGKVVPFPFFTFDQSSLKKVAVERLLGGMDVGSYKGEFLQLFAPGTRILGLAE EECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEC QNDAVTVNFSKEILAAKADAVVEKALLDAVALTLSQFSGVREVRMQIEGKESGTVDGKDV CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHEEEECCCCCCCCCCEE AMFLGHGGPLKPQESAVLHPSPPRLLSVTAMKEKGAKEVEEVNVFFDRPLEIKELNIAGG EEEEECCCCCCCCCCEEECCCCCCEEEEEEHHHCCHHHHHHHHHEECCCCEEEEEEEECC DNKRFDGEVYHSVFDMAAVLKPKAPSLFKAGMPVKVRWKVTDKVGRSAEGAGEFPLEVQE CCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEECHHCCCCCCCCCCCCEEECC H C >Mature Secondary Structure GKVRIALVAILVLIALAGCSKEQKNVPGKQVRVSATGAYEKYFGPAPTTDKGTCYAFVI CCHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCEEEEEE YFPSAKEPGKVVPFPFFTFDQSSLKKVAVERLLGGMDVGSYKGEFLQLFAPGTRILGLAE EECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEC QNDAVTVNFSKEILAAKADAVVEKALLDAVALTLSQFSGVREVRMQIEGKESGTVDGKDV CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHEEEECCCCCCCCCCEE AMFLGHGGPLKPQESAVLHPSPPRLLSVTAMKEKGAKEVEEVNVFFDRPLEIKELNIAGG EEEEECCCCCCCCCCEEECCCCCCEEEEEEHHHCCHHHHHHHHHEECCCCEEEEEEEECC DNKRFDGEVYHSVFDMAAVLKPKAPSLFKAGMPVKVRWKVTDKVGRSAEGAGEFPLEVQE CCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEECHHCCCCCCCCCCCCEEECC H C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA