| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222694
Identifier: 78222694
GI number: 78222694
Start: 1674548
End: 1675591
Strand: Reverse
Name: 78222694
Synonym: Gmet_1482
Alternate gene names: NA
Gene position: 1675591-1674548 (Counterclockwise)
Preceding gene: 78222695
Following gene: 78222693
Centisome position: 41.92
GC content: 65.61
Gene sequence:
>1044_bases ATGACCCTATTCATAGTAGTCACTGCCGTTTTGTCAGCCATCTACCTCTGGTGGGGAATCAGATTTCTGCCGGCGGAGCG CTGGCAGATGGCGGCGGCCGTGCCGGTATCCCGCGAGGCCGACGGCAGCTGGCAGGGCGTGAACATCACATGGTACGGCA TCCTGTCGGCCAACGCCTACGGAGCCGCGGCCCTCCTCTTTCTGGCCCTGGCTGCAAGCCTCGGTGCGCCGCTCGTCCTC ACCCTCTCCACCCTTGGCGTGACCCTTGCGCTCTGTGTCCCGGCATCGCGGCTGGTGGCGCGGATCGTCGAGGGGAAGCG CCACACCTTCACCGTGGGTGGGGCGGTCTTTGTGGGCACCATCACCGCCCCCTTCGTGGTGAGCCTCATGAACCGGCTCC TGGCCCCAGCCGATGGACGGCTGCCGGTCATGGCGCTCCTGGCGGCCGTGGCAAGCGCCTATGCCCTGGGGGAAGGATTC GGCCGACTCGCCTGCATCAGCTTCGGCTGCTGCTACGGCAAGCCCCTGTCGGCTGCACACCCGCTCATCGGCCGCCTTCT GACGCGGAGGGCCTTCATCTTCCGGAGCGAAACGAAAAAGGCAAGCTACGCCGGAAACCTGGCCGGAATCCCCCTGGTGC CGATCCAGGGGATCACCGCCGTCCTCTACACCGCCACGGCCCTGGCCAGCGCAGCACTTTTCCTTTCGGGACAGTTCGCC CTCGCCTTCCTCATCGCCATGGGAATCACCCAGCTCTGGCGCACGGTGTCCGAATTCCTGCGGGACGACTACCGGGGCGA CAACCGCATCTCCGCCTACCAGATCATGGGGATTCTGGCGGTTGCCTATGGAGCCGCCACCGCCTTCTACTTCCGGGGAG AGACGCCAATCATTCCCGATCCCGGCAGGATCGCCGCTGCCCTCTGGACCCCGGCCGCCATCCTCCCCCTGCAATGCATC TGGCTTGCGATCCTGTTCTATACCGGCCGAAGCACCGTCACCGGCTCGCGCATCTTCTTCCATGTGCACCGGGAGCGTGT TTGA
Upstream 100 bases:
>100_bases GCTTCTCCCACGGTTTCGGGCGCCCCCTGGTCGAAACCGACGTCAAGGTCCGTTCGCTCATCGCCGTTGCGGTAACGAAC TGAACCATCAGGAGCCGTCC
Downstream 100 bases:
>100_bases GCGGCCGTAACCGACTTTTTATTCTTTCTTAATAGAATCGTCATATCGACCGTGTATGAATAGGAGAAATTAGACAACGG GACCTTTGCTGACCTTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTLFIVVTAVLSAIYLWWGIRFLPAERWQMAAAVPVSREADGSWQGVNITWYGILSANAYGAAALLFLALAASLGAPLVL TLSTLGVTLALCVPASRLVARIVEGKRHTFTVGGAVFVGTITAPFVVSLMNRLLAPADGRLPVMALLAAVASAYALGEGF GRLACISFGCCYGKPLSAAHPLIGRLLTRRAFIFRSETKKASYAGNLAGIPLVPIQGITAVLYTATALASAALFLSGQFA LAFLIAMGITQLWRTVSEFLRDDYRGDNRISAYQIMGILAVAYGAATAFYFRGETPIIPDPGRIAAALWTPAAILPLQCI WLAILFYTGRSTVTGSRIFFHVHRERV
Sequences:
>Translated_347_residues MTLFIVVTAVLSAIYLWWGIRFLPAERWQMAAAVPVSREADGSWQGVNITWYGILSANAYGAAALLFLALAASLGAPLVL TLSTLGVTLALCVPASRLVARIVEGKRHTFTVGGAVFVGTITAPFVVSLMNRLLAPADGRLPVMALLAAVASAYALGEGF GRLACISFGCCYGKPLSAAHPLIGRLLTRRAFIFRSETKKASYAGNLAGIPLVPIQGITAVLYTATALASAALFLSGQFA LAFLIAMGITQLWRTVSEFLRDDYRGDNRISAYQIMGILAVAYGAATAFYFRGETPIIPDPGRIAAALWTPAAILPLQCI WLAILFYTGRSTVTGSRIFFHVHRERV >Mature_346_residues TLFIVVTAVLSAIYLWWGIRFLPAERWQMAAAVPVSREADGSWQGVNITWYGILSANAYGAAALLFLALAASLGAPLVLT LSTLGVTLALCVPASRLVARIVEGKRHTFTVGGAVFVGTITAPFVVSLMNRLLAPADGRLPVMALLAAVASAYALGEGFG RLACISFGCCYGKPLSAAHPLIGRLLTRRAFIFRSETKKASYAGNLAGIPLVPIQGITAVLYTATALASAALFLSGQFAL AFLIAMGITQLWRTVSEFLRDDYRGDNRISAYQIMGILAVAYGAATAFYFRGETPIIPDPGRIAAALWTPAAILPLQCIW LAILFYTGRSTVTGSRIFFHVHRERV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37106; Mature: 36975
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFIVVTAVLSAIYLWWGIRFLPAERWQMAAAVPVSREADGSWQGVNITWYGILSANAY CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCH GAAALLFLALAASLGAPLVLTLSTLGVTLALCVPASRLVARIVEGKRHTFTVGGAVFVGT HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEHH ITAPFVVSLMNRLLAPADGRLPVMALLAAVASAYALGEGFGRLACISFGCCYGKPLSAAH HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHH PLIGRLLTRRAFIFRSETKKASYAGNLAGIPLVPIQGITAVLYTATALASAALFLSGQFA HHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LAFLIAMGITQLWRTVSEFLRDDYRGDNRISAYQIMGILAVAYGAATAFYFRGETPIIPD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCC PGRIAAALWTPAAILPLQCIWLAILFYTGRSTVTGSRIFFHVHRERV CCCEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure TLFIVVTAVLSAIYLWWGIRFLPAERWQMAAAVPVSREADGSWQGVNITWYGILSANAY CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCH GAAALLFLALAASLGAPLVLTLSTLGVTLALCVPASRLVARIVEGKRHTFTVGGAVFVGT HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEHH ITAPFVVSLMNRLLAPADGRLPVMALLAAVASAYALGEGFGRLACISFGCCYGKPLSAAH HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHH PLIGRLLTRRAFIFRSETKKASYAGNLAGIPLVPIQGITAVLYTATALASAALFLSGQFA HHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LAFLIAMGITQLWRTVSEFLRDDYRGDNRISAYQIMGILAVAYGAATAFYFRGETPIIPD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCC PGRIAAALWTPAAILPLQCIWLAILFYTGRSTVTGSRIFFHVHRERV CCCEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA