| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yqjL [H]
Identifier: 78222680
GI number: 78222680
Start: 1650083
End: 1651018
Strand: Direct
Name: yqjL [H]
Synonym: Gmet_1468
Alternate gene names: 78222680
Gene position: 1650083-1651018 (Clockwise)
Preceding gene: 78222679
Following gene: 78222681
Centisome position: 41.28
GC content: 64.74
Gene sequence:
>936_bases ATGGTTTCCGCGCTGCTTCCCTGCCTGACCGGTGTCGGCTGCCTCTACCAGGCCGTTGCCACGGCCCTTGACCGGCGCAG GTATCCGCCTCCCGGAAGGCTCCTGAAGATCGGCGGCACCGACGTGCATTTCCACGCGACCGACCGGCGCGGTGCGCCCA CTGTTGTTCTCGAAACAGGGCTGGGGGGGATGTCTTCCGCCTGGGGATGGATTCAGCCCGAAGTTGCCAAATTCGCCCGG GTCGTCTCCTATGATCGTGCCGGTCTCGGTTGGAGCGCCCCCGACGATCTCCCCCGGACGGCGCTCACCGTGACCCGGCG GCTCCGGGCACTGCTCCATGACGGAGAGGTCGAGGGCCCCTATGTGCTGGTCGGCCACTCCATGGGGGGTATGTTCATGC GTTTTTTTGCCGATCAGTATCCCGGGGATGTGGCCGGGATGGTGCTGATTGATGCCGCCCACCCAGATCAGCACAGAAGA AGCCCGGCAATCCGCCGGCACATGAGTTCCGGTTTCCGGATGCTGAGAGGTGTCCCGCTTCTGGCAGGGCTCGGGTATGT CCGCATGACCGGCTTTTTCAGTTCCTGGGCCGTGGGATTGCCCGAGCGTCATGCCGCGGAGGCGGAGGCGTTTCTCTCTT CCTACACCCATTTGAAAACCACCCGCGACGAGTCCCTTGCCTGGGATGCCGTATGCGCCGAGGTCCGGAGCACCGGACGA CTCGGCGACAGGCCGCTGGCAGTGGTCAGTGCGGGAAAGGATGTGCTTCCCGGTTCCCATGAGCTGCAGTCGGAGCTCGC CGCCCTCTCTTCGCGCAGCATCCACCTCACCGTGGAAGGGGCCGACCACGTCACCCTCGTTACCCATCGTCAGCATGCCA TGGCGGTTGTCGACGCAATCCGCCAGGTGGTGCAGATGGCCGACCGCGAACGATAA
Upstream 100 bases:
>100_bases CAGACCGTCAGCGCCGCCGATGCGTGTCCATGGGGATGAGCTGCTCTACGCGGCTCGCAAGATACTGAATATCGCCCCGG GCATAAGGGGATATGGCCGT
Downstream 100 bases:
>100_bases AGGAATCTCCTGCCCAATGCCGTTTTCCGATCGTGAACCCTGCCTCAGTAACTCAGACGTGGCAGAGAGTACACATTCCC GAAGCACCGCCCCGTTATGC
Product: Alpha/beta hydrolase fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MVSALLPCLTGVGCLYQAVATALDRRRYPPPGRLLKIGGTDVHFHATDRRGAPTVVLETGLGGMSSAWGWIQPEVAKFAR VVSYDRAGLGWSAPDDLPRTALTVTRRLRALLHDGEVEGPYVLVGHSMGGMFMRFFADQYPGDVAGMVLIDAAHPDQHRR SPAIRRHMSSGFRMLRGVPLLAGLGYVRMTGFFSSWAVGLPERHAAEAEAFLSSYTHLKTTRDESLAWDAVCAEVRSTGR LGDRPLAVVSAGKDVLPGSHELQSELAALSSRSIHLTVEGADHVTLVTHRQHAMAVVDAIRQVVQMADRER
Sequences:
>Translated_311_residues MVSALLPCLTGVGCLYQAVATALDRRRYPPPGRLLKIGGTDVHFHATDRRGAPTVVLETGLGGMSSAWGWIQPEVAKFAR VVSYDRAGLGWSAPDDLPRTALTVTRRLRALLHDGEVEGPYVLVGHSMGGMFMRFFADQYPGDVAGMVLIDAAHPDQHRR SPAIRRHMSSGFRMLRGVPLLAGLGYVRMTGFFSSWAVGLPERHAAEAEAFLSSYTHLKTTRDESLAWDAVCAEVRSTGR LGDRPLAVVSAGKDVLPGSHELQSELAALSSRSIHLTVEGADHVTLVTHRQHAMAVVDAIRQVVQMADRER >Mature_311_residues MVSALLPCLTGVGCLYQAVATALDRRRYPPPGRLLKIGGTDVHFHATDRRGAPTVVLETGLGGMSSAWGWIQPEVAKFAR VVSYDRAGLGWSAPDDLPRTALTVTRRLRALLHDGEVEGPYVLVGHSMGGMFMRFFADQYPGDVAGMVLIDAAHPDQHRR SPAIRRHMSSGFRMLRGVPLLAGLGYVRMTGFFSSWAVGLPERHAAEAEAFLSSYTHLKTTRDESLAWDAVCAEVRSTGR LGDRPLAVVSAGKDVLPGSHELQSELAALSSRSIHLTVEGADHVTLVTHRQHAMAVVDAIRQVVQMADRER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 33821; Mature: 33821
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSALLPCLTGVGCLYQAVATALDRRRYPPPGRLLKIGGTDVHFHATDRRGAPTVVLETG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCEEEEECC LGGMSSAWGWIQPEVAKFARVVSYDRAGLGWSAPDDLPRTALTVTRRLRALLHDGEVEGP CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC YVLVGHSMGGMFMRFFADQYPGDVAGMVLIDAAHPDQHRRSPAIRRHMSSGFRMLRGVPL EEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHCCHH LAGLGYVRMTGFFSSWAVGLPERHAAEAEAFLSSYTHLKTTRDESLAWDAVCAEVRSTGR HHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC LGDRPLAVVSAGKDVLPGSHELQSELAALSSRSIHLTVEGADHVTLVTHRQHAMAVVDAI CCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEECHHHHHHHHHHH RQVVQMADRER HHHHHHHHCCC >Mature Secondary Structure MVSALLPCLTGVGCLYQAVATALDRRRYPPPGRLLKIGGTDVHFHATDRRGAPTVVLETG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCEEEEECC LGGMSSAWGWIQPEVAKFARVVSYDRAGLGWSAPDDLPRTALTVTRRLRALLHDGEVEGP CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC YVLVGHSMGGMFMRFFADQYPGDVAGMVLIDAAHPDQHRRSPAIRRHMSSGFRMLRGVPL EEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHCCHH LAGLGYVRMTGFFSSWAVGLPERHAAEAEAFLSSYTHLKTTRDESLAWDAVCAEVRSTGR HHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC LGDRPLAVVSAGKDVLPGSHELQSELAALSSRSIHLTVEGADHVTLVTHRQHAMAVVDAI CCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEECHHHHHHHHHHH RQVVQMADRER HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]