| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222674
Identifier: 78222674
GI number: 78222674
Start: 1641445
End: 1643412
Strand: Direct
Name: 78222674
Synonym: Gmet_1462
Alternate gene names: NA
Gene position: 1641445-1643412 (Clockwise)
Preceding gene: 78222673
Following gene: 78222675
Centisome position: 41.06
GC content: 55.03
Gene sequence:
>1968_bases ATGAAACGTACCATCACCCGCCTGACCAGCGCGGCAGCACTCGTCACCCTCATGGCCGCCGCGCCGGCCCTCGCGGTGGA GACGTCGCCCGTTGCCGCCAAAATGGCCGGGATCGGCGAGCTTATAAAGCTCCTCAGGGAGAAGGGGGTCATTTCGGAAG AGGAGGCCGGCACCCTTGAGCGGCGCATTGCCGGCGAGGAGAAAAAACAGCCCGTAACCCCGCCTGAACTAGCCGTAACG GCCGATGCCGGTGCGGCGGAACAGGTGAAGCTGACCTTCGGGGAAGCCTCCGACCTGATCGGCGCCATGAACGACCAGGG GATCATCAGCACCGAGGAAAGCCTGGCTCTCAAGGAACGGCTCTATGAAATCCGGAAGGAGGCCAAGGGGAAGCTGGATT CCCCGGTGCCGGCAATGGAACGGAAAGAGACCGCTGATATCTTCGCGGGAACCGCCATCGAGTACCGACGCTCCACCAAA TCGGAGCAAGAGGTGGCGGAAATGGTCGCCGCAGCCCGCGGAATCGGCCTCGTGAGCAGGGAAGAGTCATCCAGCCTCAT GGCCCGCTACCGGGCGAAGGCAGCCACCGACCAGCTTACCGGCGCCATGATCGACGAAGTCAACAGGGGAGTCGGCGAGA GCATTGACCGGAGGGTGACCGAGGAGATGACGAAAGTGGACAAGCTGGGCGACAAGTTCGCCAAGCTTCCCGAGTGGCTC AACCGCTTCAAGTTCTCGGGGGATATCCGGCTGCGGTATCAGGGGGATTATTTTGCCAAGGGGAATACAGGGGAAAACTC TTATCCAAGTCCACTGAAAGCAAATACTTTCTCGCCGCTCACACAGGGGAATACGATAAATACAACACATGACCGTCAAC GTCTTCGCATAAGGGCTCGGCTGGGGGTTAATGCAAAGGTCAATGATCAGGTTGATGCGGTCATAAAGCTGGCCACCGGG AACGACAAGGACCCTGTTTCAACCAATGATACCCTTGGTAATAGCTTCAACAAGCACGGTTTTTTATTGGACTTGGCCTT CTTGCAATATAAGCCTGTATCCGGCCTTACCCTTTGGGGCGGACGAATGCCAAGCCCCTGGTTCTCCACCGATCTGGTCT GGGACCCCGACCTGAATTTTGAGGGGGTTGCTGCTACGTATGCTATGCAGTTGAGCGATTCATTTGGTGGCTTCTTGACT GCGGGAGTGTTCCCTCTTCAGGAATTTGAGTATTCCCAGAGAGACTCATGGCTGTACGGGGCGCAGGCGGGAGTGGAATT CAAACATGGAGACGACATATCCGCGAAAGTGGGAGTTGCCTATTACCACTATGAAAACATGAAAGGCAAACATAGCGAAA GTCTCAATCAAGCAATAAATGGTCCTTTTCATGCTGATCTTAGGCAGGCCCAGAAAGGTAATACGGTATTTGATCAAAAT ATGAATTTCCCGACTTATTATGATGATAAAGGGAATCTTCAACTTACAAATTATGTTCCTGCTCTGGCCTCGAACTTTAA GGAACTCAACGTCACTGCCGCCGTCGATTTCGGCTTCTGGGACCCGATTCATTTCGTGTTCATGGGCGATTATGTGAAGA ACCTCGGCTTTGACCTGGACGAGGCCCGGAAGCTGACCGGCGATAATCTGGTCAAGGACGATTCCACCGGATACCAGGTG GGACTTGCGGTGGGCCACCAGACTGTCACGAAACCGTGGGAGTGGAAGAGTTACCTCTTTTACAAGAAACTGGGCGCCGA TGCGGTCTACGACGGGTTCACCGATTCTGACTTCCACTTGGGCGGCACCAACGCAAAAGGGTGGATTCTCGGCGGGGATG TGGGGATACTCAAGAACTTCTGGCTCTCCACCAAGTGGCTGACCGCCAACCAGATAACCGATACTCGTGACAAGCCCGGC CCCTTTGATGTTGACGTCTTCCAGTTCAACCTCAATGGCAAGTTCTAA
Upstream 100 bases:
>100_bases CCCCCCTGCGGATATGCCCCGGACCATGACCATCAAGATATCGTCCCTGGGATAGGGACAACTCACTTATTTCTATTGAA CAATGAACGGAGGCTTTGTA
Downstream 100 bases:
>100_bases CTCTTGCAACGGGTGTCCACCGCACCAATGAAATGGCGCTCCATGCTGGACCGTGCCGCCGTCCGGGGTCTTCGCTCCGG GCGGCGGTGGCGGCCTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 655; Mature: 655
Protein sequence:
>655_residues MKRTITRLTSAAALVTLMAAAPALAVETSPVAAKMAGIGELIKLLREKGVISEEEAGTLERRIAGEEKKQPVTPPELAVT ADAGAAEQVKLTFGEASDLIGAMNDQGIISTEESLALKERLYEIRKEAKGKLDSPVPAMERKETADIFAGTAIEYRRSTK SEQEVAEMVAAARGIGLVSREESSSLMARYRAKAATDQLTGAMIDEVNRGVGESIDRRVTEEMTKVDKLGDKFAKLPEWL NRFKFSGDIRLRYQGDYFAKGNTGENSYPSPLKANTFSPLTQGNTINTTHDRQRLRIRARLGVNAKVNDQVDAVIKLATG NDKDPVSTNDTLGNSFNKHGFLLDLAFLQYKPVSGLTLWGGRMPSPWFSTDLVWDPDLNFEGVAATYAMQLSDSFGGFLT AGVFPLQEFEYSQRDSWLYGAQAGVEFKHGDDISAKVGVAYYHYENMKGKHSESLNQAINGPFHADLRQAQKGNTVFDQN MNFPTYYDDKGNLQLTNYVPALASNFKELNVTAAVDFGFWDPIHFVFMGDYVKNLGFDLDEARKLTGDNLVKDDSTGYQV GLAVGHQTVTKPWEWKSYLFYKKLGADAVYDGFTDSDFHLGGTNAKGWILGGDVGILKNFWLSTKWLTANQITDTRDKPG PFDVDVFQFNLNGKF
Sequences:
>Translated_655_residues MKRTITRLTSAAALVTLMAAAPALAVETSPVAAKMAGIGELIKLLREKGVISEEEAGTLERRIAGEEKKQPVTPPELAVT ADAGAAEQVKLTFGEASDLIGAMNDQGIISTEESLALKERLYEIRKEAKGKLDSPVPAMERKETADIFAGTAIEYRRSTK SEQEVAEMVAAARGIGLVSREESSSLMARYRAKAATDQLTGAMIDEVNRGVGESIDRRVTEEMTKVDKLGDKFAKLPEWL NRFKFSGDIRLRYQGDYFAKGNTGENSYPSPLKANTFSPLTQGNTINTTHDRQRLRIRARLGVNAKVNDQVDAVIKLATG NDKDPVSTNDTLGNSFNKHGFLLDLAFLQYKPVSGLTLWGGRMPSPWFSTDLVWDPDLNFEGVAATYAMQLSDSFGGFLT AGVFPLQEFEYSQRDSWLYGAQAGVEFKHGDDISAKVGVAYYHYENMKGKHSESLNQAINGPFHADLRQAQKGNTVFDQN MNFPTYYDDKGNLQLTNYVPALASNFKELNVTAAVDFGFWDPIHFVFMGDYVKNLGFDLDEARKLTGDNLVKDDSTGYQV GLAVGHQTVTKPWEWKSYLFYKKLGADAVYDGFTDSDFHLGGTNAKGWILGGDVGILKNFWLSTKWLTANQITDTRDKPG PFDVDVFQFNLNGKF >Mature_655_residues MKRTITRLTSAAALVTLMAAAPALAVETSPVAAKMAGIGELIKLLREKGVISEEEAGTLERRIAGEEKKQPVTPPELAVT ADAGAAEQVKLTFGEASDLIGAMNDQGIISTEESLALKERLYEIRKEAKGKLDSPVPAMERKETADIFAGTAIEYRRSTK SEQEVAEMVAAARGIGLVSREESSSLMARYRAKAATDQLTGAMIDEVNRGVGESIDRRVTEEMTKVDKLGDKFAKLPEWL NRFKFSGDIRLRYQGDYFAKGNTGENSYPSPLKANTFSPLTQGNTINTTHDRQRLRIRARLGVNAKVNDQVDAVIKLATG NDKDPVSTNDTLGNSFNKHGFLLDLAFLQYKPVSGLTLWGGRMPSPWFSTDLVWDPDLNFEGVAATYAMQLSDSFGGFLT AGVFPLQEFEYSQRDSWLYGAQAGVEFKHGDDISAKVGVAYYHYENMKGKHSESLNQAINGPFHADLRQAQKGNTVFDQN MNFPTYYDDKGNLQLTNYVPALASNFKELNVTAAVDFGFWDPIHFVFMGDYVKNLGFDLDEARKLTGDNLVKDDSTGYQV GLAVGHQTVTKPWEWKSYLFYKKLGADAVYDGFTDSDFHLGGTNAKGWILGGDVGILKNFWLSTKWLTANQITDTRDKPG PFDVDVFQFNLNGKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72336; Mature: 72336
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTITRLTSAAALVTLMAAAPALAVETSPVAAKMAGIGELIKLLREKGVISEEEAGTLE CCCHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RRIAGEEKKQPVTPPELAVTADAGAAEQVKLTFGEASDLIGAMNDQGIISTEESLALKER HHHCCCHHCCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHCCCCCCCEECHHHHHHHHH LYEIRKEAKGKLDSPVPAMERKETADIFAGTAIEYRRSTKSEQEVAEMVAAARGIGLVSR HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEC EESSSLMARYRAKAATDQLTGAMIDEVNRGVGESIDRRVTEEMTKVDKLGDKFAKLPEWL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRFKFSGDIRLRYQGDYFAKGNTGENSYPSPLKANTFSPLTQGNTINTTHDRQRLRIRAR HHHCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEE LGVNAKVNDQVDAVIKLATGNDKDPVSTNDTLGNSFNKHGFLLDLAFLQYKPVSGLTLWG ECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCEEEEC GRMPSPWFSTDLVWDPDLNFEGVAATYAMQLSDSFGGFLTAGVFPLQEFEYSQRDSWLYG CCCCCCCCCCCEEECCCCCCCCHHHEEEEEHHCCCCCHHHHCCCCHHHHCCCCCCCEEEE AQAGVEFKHGDDISAKVGVAYYHYENMKGKHSESLNQAINGPFHADLRQAQKGNTVFDQN CCCCCEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHCCCEEEECC MNFPTYYDDKGNLQLTNYVPALASNFKELNVTAAVDFGFWDPIHFVFMGDYVKNLGFDLD CCCCEEECCCCCEEEECCHHHHHCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHH EARKLTGDNLVKDDSTGYQVGLAVGHQTVTKPWEWKSYLFYKKLGADAVYDGFTDSDFHL HHHHCCCCCCCCCCCCCEEEEEEECCHHCCCCCCHHHHHHHHHHCCCHHCCCCCCCCEEE GGTNAKGWILGGDVGILKNFWLSTKWLTANQITDTRDKPGPFDVDVFQFNLNGKF CCCCCCCEEEECCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MKRTITRLTSAAALVTLMAAAPALAVETSPVAAKMAGIGELIKLLREKGVISEEEAGTLE CCCHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RRIAGEEKKQPVTPPELAVTADAGAAEQVKLTFGEASDLIGAMNDQGIISTEESLALKER HHHCCCHHCCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHCCCCCCCEECHHHHHHHHH LYEIRKEAKGKLDSPVPAMERKETADIFAGTAIEYRRSTKSEQEVAEMVAAARGIGLVSR HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEC EESSSLMARYRAKAATDQLTGAMIDEVNRGVGESIDRRVTEEMTKVDKLGDKFAKLPEWL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRFKFSGDIRLRYQGDYFAKGNTGENSYPSPLKANTFSPLTQGNTINTTHDRQRLRIRAR HHHCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEE LGVNAKVNDQVDAVIKLATGNDKDPVSTNDTLGNSFNKHGFLLDLAFLQYKPVSGLTLWG ECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCEEEEC GRMPSPWFSTDLVWDPDLNFEGVAATYAMQLSDSFGGFLTAGVFPLQEFEYSQRDSWLYG CCCCCCCCCCCEEECCCCCCCCHHHEEEEEHHCCCCCHHHHCCCCHHHHCCCCCCCEEEE AQAGVEFKHGDDISAKVGVAYYHYENMKGKHSESLNQAINGPFHADLRQAQKGNTVFDQN CCCCCEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHCCCEEEECC MNFPTYYDDKGNLQLTNYVPALASNFKELNVTAAVDFGFWDPIHFVFMGDYVKNLGFDLD CCCCEEECCCCCEEEECCHHHHHCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHH EARKLTGDNLVKDDSTGYQVGLAVGHQTVTKPWEWKSYLFYKKLGADAVYDGFTDSDFHL HHHHCCCCCCCCCCCCCEEEEEEECCHHCCCCCCHHHHHHHHHHCCCHHCCCCCCCCEEE GGTNAKGWILGGDVGILKNFWLSTKWLTANQITDTRDKPGPFDVDVFQFNLNGKF CCCCCCCEEEECCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA