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The map label for this gene is exbD [C]

Identifier: 78222672

GI number: 78222672

Start: 1640250

End: 1640657

Strand: Direct

Name: exbD [C]

Synonym: Gmet_1460

Alternate gene names: 78222672

Gene position: 1640250-1640657 (Clockwise)

Preceding gene: 78222671

Following gene: 78222673

Centisome position: 41.03

GC content: 60.54

Gene sequence:

>408_bases
ATGAAAGCGCCTGCCGATGACATGGATGAAACGGTCGAGATAAACGTCGTACCGCTCCTGGACCTGGCCTGGAACCTCCT
GGTGGTGTTCATGATCGTGGTGACGGCGTCGGTCCAGGGGATCAACGTGAACCTCCCCAAGGCGAGCGCGGCCGCCGGGA
AGATCAAGCCGAGCACCAAGGCGATCACCGTCGCCTCCGAGGGGACCATCTACCTGGACAGCGTGCCGGTGACTTTGGCG
GAGCTTGAAACCTATTTGCGCCAGGCAAAGGCCAGCGATCCGAACCTGCCGGTGGTGGTGCGCGGCGACGAGAAGGTTGA
GTACAAGAGCATCGTGGAGGTGCTCGATCTCCTCTCCAAGCTGGAAATCAGCCAGTTGGGGCTCGTGACCCAGAAACTGG
TGAAGTAG

Upstream 100 bases:

>100_bases
ACAGCTACCTGACCAACCGGATGAAGAACCTGAACGCCGACACCCACGTCTTTATCGACGAATACGCGGTGAAGGTTGAG
GGCGTCTACGGAGAGAGAGC

Downstream 100 bases:

>100_bases
CGGAGGAAGACCAATGGCAACGCACAAGAAGAAAAAGCCCCAGCTGAAGAATTTTTTCGTCCCGGCAGCGGTGGTGCTTG
TCATCATCGGCGGCATCGGC

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: Protein lR; LR Protein; Transport Energizing Protein ExbD/lR Family; Biopolymer Transport Protein ExbD; Biopolymer ExbD/lR Family Transporter; Transport Protein ExbD; Biopolymer Transport Protein ExbD/lR Family; Biopolymer Transport Protein Exbd/lr Family; Membrane Spanning Protein In lA-TolQ-TolR Complex; ExbD/lR Family Protein; Biopolymer Transporter ExbD/lR; ExbD-Like Protein; LR Membrane Protein; Biopolymer Transport Protein ExbD/lR Family Protein; Biopolymer Transport Protein Exbd/lr; ExbD/lR; Biopolymer Transport lR; Transporter-Like Membrane Protein; NB System Transport Protein ExbD; Biopolymer Transport ExbD Protein; Biopolymer Transport ExbD/lR Protein; Iopolymer Transport Protein ExbD/lR; Biopolymer Transporter ExbD; And Transport-Associated Protein lR

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKAPADDMDETVEINVVPLLDLAWNLLVVFMIVVTASVQGINVNLPKASAAAGKIKPSTKAITVASEGTIYLDSVPVTLA
ELETYLRQAKASDPNLPVVVRGDEKVEYKSIVEVLDLLSKLEISQLGLVTQKLVK

Sequences:

>Translated_135_residues
MKAPADDMDETVEINVVPLLDLAWNLLVVFMIVVTASVQGINVNLPKASAAAGKIKPSTKAITVASEGTIYLDSVPVTLA
ELETYLRQAKASDPNLPVVVRGDEKVEYKSIVEVLDLLSKLEISQLGLVTQKLVK
>Mature_135_residues
MKAPADDMDETVEINVVPLLDLAWNLLVVFMIVVTASVQGINVNLPKASAAAGKIKPSTKAITVASEGTIYLDSVPVTLA
ELETYLRQAKASDPNLPVVVRGDEKVEYKSIVEVLDLLSKLEISQLGLVTQKLVK

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Type II Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789380, Length=131, Percent_Identity=27.4809160305344, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14529; Mature: 14529

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPADDMDETVEINVVPLLDLAWNLLVVFMIVVTASVQGINVNLPKASAAAGKIKPSTK
CCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC
AITVASEGTIYLDSVPVTLAELETYLRQAKASDPNLPVVVRGDEKVEYKSIVEVLDLLSK
EEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
LEISQLGLVTQKLVK
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKAPADDMDETVEINVVPLLDLAWNLLVVFMIVVTASVQGINVNLPKASAAAGKIKPSTK
CCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC
AITVASEGTIYLDSVPVTLAELETYLRQAKASDPNLPVVVRGDEKVEYKSIVEVLDLLSK
EEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
LEISQLGLVTQKLVK
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA