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The map label for this gene is yohK [H]

Identifier: 78222419

GI number: 78222419

Start: 1351196

End: 1351915

Strand: Reverse

Name: yohK [H]

Synonym: Gmet_1204

Alternate gene names: 78222419

Gene position: 1351915-1351196 (Counterclockwise)

Preceding gene: 78222420

Following gene: 78222418

Centisome position: 33.82

GC content: 58.33

Gene sequence:

>720_bases
ATGAGCGCTGAAATGCAGCAGGTATGGGTGTACCTGTCGACCTCTCCCCTGTTGTGGCTGACGTTGACCCTGATCGCGTA
CCAGATCGGCACGTGGGTCTTTCGGAGGCTCGACTGCCCTCCTTTGCTGAATCCGGTGCTGACCGCCATCATCCTGCTCG
TTGTGCTGCTCAAGGTGAGCGGCATCGATTATCAGACCTATTTCCGGGGAGCCCAGTTCATTCACTTTCTGCTCGGTCCG
GCAACGGTCGCCCTGGCAATACCGCTCTATCGGGAGATGGAAGTAATCCGAAAGTCCTTTATCCCGATTCTCATCACCCT
GGCAGTGGGCTCCGTAGCGGCCATCATCAGCGCGGTCGGCATTGTCTGGGCGCTGGGGGGAGAAACAATCATCCTTTTGA
GTGTGGCTCCGAAATCGGTTACGACACCGATCGCCATGGGAATTTCCGAACAGATCGGCGGTTTGCCGTCGTTAACCGCC
GTGGTGGTCGTTCTGACCGGAATTACCGGAGCCGTTGGCGGCGACTTCATACTGAACCTGCTGAGGATCAAGGACGACAA
CGCCCGCGGCATGGCTCTGGGAGTCGCCTCACACGGCATCGGCACCGCCCATGCCATTCAGAAGAGCAGGATGGCCGGTG
CGTTTTCGGCCCTGGCCATGGCGCTGAACGGGTTGTTTACCGCTTTGCTGCTGCCGGTGCTCGTTCATTTAATGCAGTAG

Upstream 100 bases:

>100_bases
GCGCCATCATCGTCGGCACCCTTGCGACAATCGGGGTAACCGGTCTGGTCATGAAATTCCTGAACCGCCGACTCGCCTGT
GCACACGAGGAGACCCGGCA

Downstream 100 bases:

>100_bases
AGAAACGTTGAATAGCCGAAGGGAAGAGAGAGGTGCCCCCATGAAAAGACCAACATTCCCTGCGCCATACAAACATGAAC
ACGCGCCGGTCAAAAACGTC

Product: LrgB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSAEMQQVWVYLSTSPLLWLTLTLIAYQIGTWVFRRLDCPPLLNPVLTAIILLVVLLKVSGIDYQTYFRGAQFIHFLLGP
ATVALAIPLYREMEVIRKSFIPILITLAVGSVAAIISAVGIVWALGGETIILLSVAPKSVTTPIAMGISEQIGGLPSLTA
VVVVLTGITGAVGGDFILNLLRIKDDNARGMALGVASHGIGTAHAIQKSRMAGAFSALAMALNGLFTALLLPVLVHLMQ

Sequences:

>Translated_239_residues
MSAEMQQVWVYLSTSPLLWLTLTLIAYQIGTWVFRRLDCPPLLNPVLTAIILLVVLLKVSGIDYQTYFRGAQFIHFLLGP
ATVALAIPLYREMEVIRKSFIPILITLAVGSVAAIISAVGIVWALGGETIILLSVAPKSVTTPIAMGISEQIGGLPSLTA
VVVVLTGITGAVGGDFILNLLRIKDDNARGMALGVASHGIGTAHAIQKSRMAGAFSALAMALNGLFTALLLPVLVHLMQ
>Mature_238_residues
SAEMQQVWVYLSTSPLLWLTLTLIAYQIGTWVFRRLDCPPLLNPVLTAIILLVVLLKVSGIDYQTYFRGAQFIHFLLGPA
TVALAIPLYREMEVIRKSFIPILITLAVGSVAAIISAVGIVWALGGETIILLSVAPKSVTTPIAMGISEQIGGLPSLTAV
VVVLTGITGAVGGDFILNLLRIKDDNARGMALGVASHGIGTAHAIQKSRMAGAFSALAMALNGLFTALLLPVLVHLMQ

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=215, Percent_Identity=42.3255813953488, Blast_Score=167, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 25369; Mature: 25238

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEMQQVWVYLSTSPLLWLTLTLIAYQIGTWVFRRLDCPPLLNPVLTAIILLVVLLKVS
CCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GIDYQTYFRGAQFIHFLLGPATVALAIPLYREMEVIRKSFIPILITLAVGSVAAIISAVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVWALGGETIILLSVAPKSVTTPIAMGISEQIGGLPSLTAVVVVLTGITGAVGGDFILNL
HHHHCCCCEEEEEEECCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH
LRIKDDNARGMALGVASHGIGTAHAIQKSRMAGAFSALAMALNGLFTALLLPVLVHLMQ
HHHCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SAEMQQVWVYLSTSPLLWLTLTLIAYQIGTWVFRRLDCPPLLNPVLTAIILLVVLLKVS
CCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GIDYQTYFRGAQFIHFLLGPATVALAIPLYREMEVIRKSFIPILITLAVGSVAAIISAVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVWALGGETIILLSVAPKSVTTPIAMGISEQIGGLPSLTAVVVVLTGITGAVGGDFILNL
HHHHCCCCEEEEEEECCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH
LRIKDDNARGMALGVASHGIGTAHAIQKSRMAGAFSALAMALNGLFTALLLPVLVHLMQ
HHHCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]