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The map label for this gene is yggU [C]

Identifier: 78222380

GI number: 78222380

Start: 1289079

End: 1289387

Strand: Reverse

Name: yggU [C]

Synonym: Gmet_1164

Alternate gene names: 78222380

Gene position: 1289387-1289079 (Counterclockwise)

Preceding gene: 78222381

Following gene: 78222379

Centisome position: 32.26

GC content: 56.63

Gene sequence:

>309_bases
ATGAAGAGTGACACCCCTTCCGGGGAACTCAGAATCACGGAAAACGCTGATGGCGTCACCTTCTCCGTGCACGTTCAACC
CCGCGCCTCAAAAAACGGAATCTGCGGCATCCAGGGGGATGCCATCAAGCTTCGCCTGACATCTCCCCCTGTTGAGGGGG
AAGCGAACCGCCTCTGCACTGAATACCTCGCAAAACTACTCAAGGTTCCCAAGTCAGCCGTCACCATAATTGCCGGGGAT
AAGTCGCGGCACAAGACGATTCGGGTTTCTGGCGCCACGGCTCAGGCTGTTCACAACCTACTGCCCTAA

Upstream 100 bases:

>100_bases
CAACTCAACGACCAGGTCCAGGAAATCCGTCGCCAGCGGCTCCAATTCGAGAGTTCCTTCAAGTCCCTCCTCGACACACA
CTACAAAATGCTCGCCCTTG

Downstream 100 bases:

>100_bases
TTTCCCCAGTCATTTCATATATTGCGCTTCCAATCATCCACACACGGGGTTGACAACTTCCGTAGTGAATTACTATAGTG
AATCAACGATTACCGCAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MKSDTPSGELRITENADGVTFSVHVQPRASKNGICGIQGDAIKLRLTSPPVEGEANRLCTEYLAKLLKVPKSAVTIIAGD
KSRHKTIRVSGATAQAVHNLLP

Sequences:

>Translated_102_residues
MKSDTPSGELRITENADGVTFSVHVQPRASKNGICGIQGDAIKLRLTSPPVEGEANRLCTEYLAKLLKVPKSAVTIIAGD
KSRHKTIRVSGATAQAVHNLLP
>Mature_102_residues
MKSDTPSGELRITENADGVTFSVHVQPRASKNGICGIQGDAIKLRLTSPPVEGEANRLCTEYLAKLLKVPKSAVTIIAGD
KSRHKTIRVSGATAQAVHNLLP

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

Organism=Escherichia coli, GI87082189, Length=78, Percent_Identity=41.025641025641, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 10846; Mature: 10846

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDTPSGELRITENADGVTFSVHVQPRASKNGICGIQGDAIKLRLTSPPVEGEANRLCT
CCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHH
EYLAKLLKVPKSAVTIIAGDKSRHKTIRVSGATAQAVHNLLP
HHHHHHHHCCCCEEEEEECCCCCCEEEEEECCHHHHHHHCCC
>Mature Secondary Structure
MKSDTPSGELRITENADGVTFSVHVQPRASKNGICGIQGDAIKLRLTSPPVEGEANRLCT
CCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHH
EYLAKLLKVPKSAVTIIAGDKSRHKTIRVSGATAQAVHNLLP
HHHHHHHHCCCCEEEEEECCCCCCEEEEEECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA