| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222319
Identifier: 78222319
GI number: 78222319
Start: 1223810
End: 1225336
Strand: Direct
Name: 78222319
Synonym: Gmet_1101
Alternate gene names: NA
Gene position: 1223810-1225336 (Clockwise)
Preceding gene: 78222318
Following gene: 78222320
Centisome position: 30.61
GC content: 60.31
Gene sequence:
>1527_bases ATGGAAAAACGACCCGTTTCTCAATTGATGCTCAATGGTGCCTGGCTGGTGAAGGCTGCCAACGGTGAGTACCTCGATGT GGAGGTGGGGAAGGACGGTGCGCCGAAACGGTTCGTGACGGTTCCCGTCAGCCGCGTGCGGCATCTGTTCCGCTTCGCGG CGCCGGATGAATGGGCAAAGGGAAAGCAGTGCCCGATGCTTGCCGAACCCGTGCCCATGGAACATGCAGGCGCGGTTCGC GGAGTGAAGGGAGCGCCCCTCGCACCGGCGGTGCAGCTTCCGGTCGTGGTTGCCCATGACGGGTGCATGGGGTTTCGTCT TACCCTTCTGGCGGAAACCGCCCGCGCCATGAGATCACTTACCGTGTCACCCCTCCATGACGCCTCGCGGTCGGCCAGGG GGCGCGCAATGGCGGTCGAGCTCATGGAGAGCATCGAGGAGAAGCGGCGCTTCTTCGCGATCGACATGAACACGACGACG CTTCTGCAAACGTCGAGCACCGTCGGTTTTCCCCAGTTCGAAGGAGAGGCGAAGCGCGCCTTCGACGTCATCGCCCAGCA ACTCAGGTTCGATCCCCACGGCGACCGGCTCGACGAAGCGGCCCTCGATCGGCTGCACCGCCCCAATGATTTTTCCGAAT CCGCCTGGCAGCAGGTTTGCGATCAGCTGCGGCTTGAGATTCACTACCGGTTCCTGTGCAAGTCGCATTTTGAAGCGCTG ACGCACTTCGTGCAGAACGTGTTCATCGCCAACAGCGGCGTCGTGGAAACCGTCGGCGGCCTGGTGAAGCTCGACAAGAA CCAGGGAGTCAACCTCCTCATCCAGGGGATGTTCAGCCTGGTGGCCAAGGGGGTGGGAGCGCTGCCGTTTCCCGGCTCCG GGGTCGTATCCGGTGCCCTCGGCGCCCTGTTCAGCTGGATGCTGCAGGACCAGGGGCCGAACGCTGCCACCCTGGCAGTG GCCCTCGTTAACGCCCGCGACGGTCTCGCTGACCTCTTCAACAAACTCATCACCTCCATCCAGAAGATGCAGGGCGCCGT TTATTCCGACTGGGGCAAACTCTCGGAGATGGGAATGGCCCTTGAGCGGGAGGACGGCTCCCGCTGTTGGCCGGAGGAAG ACGGCGACCTGAGACGGGAGGCAAGCCGGCTTATGGAAATTTCCGTCTGGAAGGATCTGGTGAAGATCAAGTGGCACCAC ATGACGTCATCGGATGATCCCGCCTTTCTCCCCCGCTATACCGAAGCGGACAAACAGGCCTATGAGAGTAAAAACCGCAA CTACTGGGTTGAATACCGCGCCGGAACGGAGACCAACCTCTTTGGCAAGAAATCGAACGGATTTTACGTGACCTATCACT GGCTCGGATACGGGAACATGTGGGTATGGCACCATGAGCCCGATAACGCCATGTGCGACAGGCTCTTCACAAAGCTGAAA GTCACCCGTCAGGAGGTGTTCACGGACACTTCGTGGAATCTTGGCAGGGAAACTTTCCTTGTGCAGAATTACCCGGTTCC GATGTAA
Upstream 100 bases:
>100_bases ATCTGCCACGATGAGACGGGTGACGAGTGGTCGCTGGTGTGACGAGTTTGCGGGAAATCGGCTCTGTTGGTTCAGGCGTG GAACGCCAGGGAGGAAGAGA
Downstream 100 bases:
>100_bases GCGGGAACGTTCTTCACATCACGGCTGAGAAAAGGCTTCACAAGCTTGACTTAACGCGCTATTTCGATTAGTTTGTACTA TTCGCAACTTTTTACCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MEKRPVSQLMLNGAWLVKAANGEYLDVEVGKDGAPKRFVTVPVSRVRHLFRFAAPDEWAKGKQCPMLAEPVPMEHAGAVR GVKGAPLAPAVQLPVVVAHDGCMGFRLTLLAETARAMRSLTVSPLHDASRSARGRAMAVELMESIEEKRRFFAIDMNTTT LLQTSSTVGFPQFEGEAKRAFDVIAQQLRFDPHGDRLDEAALDRLHRPNDFSESAWQQVCDQLRLEIHYRFLCKSHFEAL THFVQNVFIANSGVVETVGGLVKLDKNQGVNLLIQGMFSLVAKGVGALPFPGSGVVSGALGALFSWMLQDQGPNAATLAV ALVNARDGLADLFNKLITSIQKMQGAVYSDWGKLSEMGMALEREDGSRCWPEEDGDLRREASRLMEISVWKDLVKIKWHH MTSSDDPAFLPRYTEADKQAYESKNRNYWVEYRAGTETNLFGKKSNGFYVTYHWLGYGNMWVWHHEPDNAMCDRLFTKLK VTRQEVFTDTSWNLGRETFLVQNYPVPM
Sequences:
>Translated_508_residues MEKRPVSQLMLNGAWLVKAANGEYLDVEVGKDGAPKRFVTVPVSRVRHLFRFAAPDEWAKGKQCPMLAEPVPMEHAGAVR GVKGAPLAPAVQLPVVVAHDGCMGFRLTLLAETARAMRSLTVSPLHDASRSARGRAMAVELMESIEEKRRFFAIDMNTTT LLQTSSTVGFPQFEGEAKRAFDVIAQQLRFDPHGDRLDEAALDRLHRPNDFSESAWQQVCDQLRLEIHYRFLCKSHFEAL THFVQNVFIANSGVVETVGGLVKLDKNQGVNLLIQGMFSLVAKGVGALPFPGSGVVSGALGALFSWMLQDQGPNAATLAV ALVNARDGLADLFNKLITSIQKMQGAVYSDWGKLSEMGMALEREDGSRCWPEEDGDLRREASRLMEISVWKDLVKIKWHH MTSSDDPAFLPRYTEADKQAYESKNRNYWVEYRAGTETNLFGKKSNGFYVTYHWLGYGNMWVWHHEPDNAMCDRLFTKLK VTRQEVFTDTSWNLGRETFLVQNYPVPM >Mature_508_residues MEKRPVSQLMLNGAWLVKAANGEYLDVEVGKDGAPKRFVTVPVSRVRHLFRFAAPDEWAKGKQCPMLAEPVPMEHAGAVR GVKGAPLAPAVQLPVVVAHDGCMGFRLTLLAETARAMRSLTVSPLHDASRSARGRAMAVELMESIEEKRRFFAIDMNTTT LLQTSSTVGFPQFEGEAKRAFDVIAQQLRFDPHGDRLDEAALDRLHRPNDFSESAWQQVCDQLRLEIHYRFLCKSHFEAL THFVQNVFIANSGVVETVGGLVKLDKNQGVNLLIQGMFSLVAKGVGALPFPGSGVVSGALGALFSWMLQDQGPNAATLAV ALVNARDGLADLFNKLITSIQKMQGAVYSDWGKLSEMGMALEREDGSRCWPEEDGDLRREASRLMEISVWKDLVKIKWHH MTSSDDPAFLPRYTEADKQAYESKNRNYWVEYRAGTETNLFGKKSNGFYVTYHWLGYGNMWVWHHEPDNAMCDRLFTKLK VTRQEVFTDTSWNLGRETFLVQNYPVPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57018; Mature: 57018
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKRPVSQLMLNGAWLVKAANGEYLDVEVGKDGAPKRFVTVPVSRVRHLFRFAAPDEWAK CCCCCHHHHHHCCEEEEEECCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHCCCCHHCC GKQCPMLAEPVPMEHAGAVRGVKGAPLAPAVQLPVVVAHDGCMGFRLTLLAETARAMRSL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEECCCCHHHHHHHHHHHHHHHHC TVSPLHDASRSARGRAMAVELMESIEEKRRFFAIDMNTTTLLQTSSTVGFPQFEGEAKRA CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCHHHHH FDVIAQQLRFDPHGDRLDEAALDRLHRPNDFSESAWQQVCDQLRLEIHYRFLCKSHFEAL HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH THFVQNVFIANSGVVETVGGLVKLDKNQGVNLLIQGMFSLVAKGVGALPFPGSGVVSGAL HHHHHHHHHCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH GALFSWMLQDQGPNAATLAVALVNARDGLADLFNKLITSIQKMQGAVYSDWGKLSEMGMA HHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC LEREDGSRCWPEEDGDLRREASRLMEISVWKDLVKIKWHHMTSSDDPAFLPRYTEADKQA EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHH YESKNRNYWVEYRAGTETNLFGKKSNGFYVTYHWLGYGNMWVWHHEPDNAMCDRLFTKLK HHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHH VTRQEVFTDTSWNLGRETFLVQNYPVPM HHHHHHHCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MEKRPVSQLMLNGAWLVKAANGEYLDVEVGKDGAPKRFVTVPVSRVRHLFRFAAPDEWAK CCCCCHHHHHHCCEEEEEECCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHCCCCHHCC GKQCPMLAEPVPMEHAGAVRGVKGAPLAPAVQLPVVVAHDGCMGFRLTLLAETARAMRSL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEECCCCHHHHHHHHHHHHHHHHC TVSPLHDASRSARGRAMAVELMESIEEKRRFFAIDMNTTTLLQTSSTVGFPQFEGEAKRA CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCHHHHH FDVIAQQLRFDPHGDRLDEAALDRLHRPNDFSESAWQQVCDQLRLEIHYRFLCKSHFEAL HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH THFVQNVFIANSGVVETVGGLVKLDKNQGVNLLIQGMFSLVAKGVGALPFPGSGVVSGAL HHHHHHHHHCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH GALFSWMLQDQGPNAATLAVALVNARDGLADLFNKLITSIQKMQGAVYSDWGKLSEMGMA HHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC LEREDGSRCWPEEDGDLRREASRLMEISVWKDLVKIKWHHMTSSDDPAFLPRYTEADKQA EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHH YESKNRNYWVEYRAGTETNLFGKKSNGFYVTYHWLGYGNMWVWHHEPDNAMCDRLFTKLK HHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHH VTRQEVFTDTSWNLGRETFLVQNYPVPM HHHHHHHCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA