| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222311
Identifier: 78222311
GI number: 78222311
Start: 1216641
End: 1217600
Strand: Direct
Name: 78222311
Synonym: Gmet_1093
Alternate gene names: NA
Gene position: 1216641-1217600 (Clockwise)
Preceding gene: 78222304
Following gene: 78222313
Centisome position: 30.44
GC content: 63.54
Gene sequence:
>960_bases GTGAAAACCCCGCTGATCGCCTTGGCCTGCATGGCTTTGGTTCTTGTCTGTTCACCAACGTCGCGCGCCGACGACGAAGT GCTCCCCCAGCCGTCTCCTCCCCTCTGCGAAGAGACGCTCAAGCGCCAGGATGAGGCCCTTGCTGCCCTCAAGGCGGAAC AGTCCCGGCTGGAGCAGAAGATCCGGGATATGGAGTGCGCCCCGGTCGTTTCCAGCGATGAGCTCCTGGCGAGAAATCTC CACCATCTCCAGAGCCTGGCGGCCAATACTCGCGCCCAGCGCCAGACCATGACCGACTTCAGGACCTTCGTCACCTGGAT GAGCTCAAGCCTTGCGGGATACGAGAAGTACATCCAGGCCGGCTCGGTGGTGGCCGGAGCCGCCAAGGTTCTCCCCATCC CCTACGCGGGGCAGGCGTCGATGCTGACCAAGTTCGTCTCCCAGGGGGTCCTCTCCCTCAATGCCGCCTCGGGTTCCATT GCCACGTACCTGAAAATCTCCGACCAGTACCTGGCCCTGGCCGGCGGCATCGACCCGAAACGCCCCGATCCCGCCCGGGT CTCCGCCGCTGTCCGCTTTGCCGACGGGGAATTCCTGCGGTCCATGACCGATGTCCAGGCCAAGCTGCGGACCTCCGCCG ACATCTCCGCCTCCACCCTGTCGTTCCTGAAGACCCTGGACAGCTATGTGGGAGGGAGTGACGAATACTGGGCCAGGACC AAGGCCTTCATCACCCGCAACGACGCCTACAAGAAAGACAAAAGCTATCTGGCCTCGAGCATCGAGGGGCTCACGAGCCA GGCCGGAGCGTTCAATAACAGGCTCACCCTCTTCGAGGAAACGGCACGCAAGGATCTGCCGATCATCAAGAACCTGGTGG CCTACGACGAACTGGCGCGGGAGATCGATGCCCGGGCGCGGCAGAAGCGCGAGGCCATGGCAGCGGCGGTGAAGCCGTAG
Upstream 100 bases:
>100_bases CTTCAACCTGCCCGGCTGCCATGAAACGCTGGACAGAGAGGCTGGGGGAGGGGTACTATCCCACGTTGTTGCGCATCACC TGAAGAAAGGAACCCCCCCC
Downstream 100 bases:
>100_bases CGGCTGTGCGGTGACGGCGCTGGTATCGGAAAGGGCGGGGGATAATCCCCGCCCTTTCCTGTTTTCATGGGTCGAATGGG CTGTGCCATCGACGGGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKTPLIALACMALVLVCSPTSRADDEVLPQPSPPLCEETLKRQDEALAALKAEQSRLEQKIRDMECAPVVSSDELLARNL HHLQSLAANTRAQRQTMTDFRTFVTWMSSSLAGYEKYIQAGSVVAGAAKVLPIPYAGQASMLTKFVSQGVLSLNAASGSI ATYLKISDQYLALAGGIDPKRPDPARVSAAVRFADGEFLRSMTDVQAKLRTSADISASTLSFLKTLDSYVGGSDEYWART KAFITRNDAYKKDKSYLASSIEGLTSQAGAFNNRLTLFEETARKDLPIIKNLVAYDELAREIDARARQKREAMAAAVKP
Sequences:
>Translated_319_residues MKTPLIALACMALVLVCSPTSRADDEVLPQPSPPLCEETLKRQDEALAALKAEQSRLEQKIRDMECAPVVSSDELLARNL HHLQSLAANTRAQRQTMTDFRTFVTWMSSSLAGYEKYIQAGSVVAGAAKVLPIPYAGQASMLTKFVSQGVLSLNAASGSI ATYLKISDQYLALAGGIDPKRPDPARVSAAVRFADGEFLRSMTDVQAKLRTSADISASTLSFLKTLDSYVGGSDEYWART KAFITRNDAYKKDKSYLASSIEGLTSQAGAFNNRLTLFEETARKDLPIIKNLVAYDELAREIDARARQKREAMAAAVKP >Mature_319_residues MKTPLIALACMALVLVCSPTSRADDEVLPQPSPPLCEETLKRQDEALAALKAEQSRLEQKIRDMECAPVVSSDELLARNL HHLQSLAANTRAQRQTMTDFRTFVTWMSSSLAGYEKYIQAGSVVAGAAKVLPIPYAGQASMLTKFVSQGVLSLNAASGSI ATYLKISDQYLALAGGIDPKRPDPARVSAAVRFADGEFLRSMTDVQAKLRTSADISASTLSFLKTLDSYVGGSDEYWART KAFITRNDAYKKDKSYLASSIEGLTSQAGAFNNRLTLFEETARKDLPIIKNLVAYDELAREIDARARQKREAMAAAVKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34778; Mature: 34778
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPLIALACMALVLVCSPTSRADDEVLPQPSPPLCEETLKRQDEALAALKAEQSRLEQK CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRDMECAPVVSSDELLARNLHHLQSLAANTRAQRQTMTDFRTFVTWMSSSLAGYEKYIQA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSVVAGAAKVLPIPYAGQASMLTKFVSQGVLSLNAASGSIATYLKISDQYLALAGGIDPK CCHHHCCHHHCCCCCCCHHHHHHHHHHCCHHEEECCCCCEEEEEEECCHHHEEECCCCCC RPDPARVSAAVRFADGEFLRSMTDVQAKLRTSADISASTLSFLKTLDSYVGGSDEYWART CCCCHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH KAFITRNDAYKKDKSYLASSIEGLTSQAGAFNNRLTLFEETARKDLPIIKNLVAYDELAR HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH EIDARARQKREAMAAAVKP HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTPLIALACMALVLVCSPTSRADDEVLPQPSPPLCEETLKRQDEALAALKAEQSRLEQK CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRDMECAPVVSSDELLARNLHHLQSLAANTRAQRQTMTDFRTFVTWMSSSLAGYEKYIQA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSVVAGAAKVLPIPYAGQASMLTKFVSQGVLSLNAASGSIATYLKISDQYLALAGGIDPK CCHHHCCHHHCCCCCCCHHHHHHHHHHCCHHEEECCCCCEEEEEEECCHHHEEECCCCCC RPDPARVSAAVRFADGEFLRSMTDVQAKLRTSADISASTLSFLKTLDSYVGGSDEYWART CCCCHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH KAFITRNDAYKKDKSYLASSIEGLTSQAGAFNNRLTLFEETARKDLPIIKNLVAYDELAR HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH EIDARARQKREAMAAAVKP HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA