Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78222311

Identifier: 78222311

GI number: 78222311

Start: 1216641

End: 1217600

Strand: Direct

Name: 78222311

Synonym: Gmet_1093

Alternate gene names: NA

Gene position: 1216641-1217600 (Clockwise)

Preceding gene: 78222304

Following gene: 78222313

Centisome position: 30.44

GC content: 63.54

Gene sequence:

>960_bases
GTGAAAACCCCGCTGATCGCCTTGGCCTGCATGGCTTTGGTTCTTGTCTGTTCACCAACGTCGCGCGCCGACGACGAAGT
GCTCCCCCAGCCGTCTCCTCCCCTCTGCGAAGAGACGCTCAAGCGCCAGGATGAGGCCCTTGCTGCCCTCAAGGCGGAAC
AGTCCCGGCTGGAGCAGAAGATCCGGGATATGGAGTGCGCCCCGGTCGTTTCCAGCGATGAGCTCCTGGCGAGAAATCTC
CACCATCTCCAGAGCCTGGCGGCCAATACTCGCGCCCAGCGCCAGACCATGACCGACTTCAGGACCTTCGTCACCTGGAT
GAGCTCAAGCCTTGCGGGATACGAGAAGTACATCCAGGCCGGCTCGGTGGTGGCCGGAGCCGCCAAGGTTCTCCCCATCC
CCTACGCGGGGCAGGCGTCGATGCTGACCAAGTTCGTCTCCCAGGGGGTCCTCTCCCTCAATGCCGCCTCGGGTTCCATT
GCCACGTACCTGAAAATCTCCGACCAGTACCTGGCCCTGGCCGGCGGCATCGACCCGAAACGCCCCGATCCCGCCCGGGT
CTCCGCCGCTGTCCGCTTTGCCGACGGGGAATTCCTGCGGTCCATGACCGATGTCCAGGCCAAGCTGCGGACCTCCGCCG
ACATCTCCGCCTCCACCCTGTCGTTCCTGAAGACCCTGGACAGCTATGTGGGAGGGAGTGACGAATACTGGGCCAGGACC
AAGGCCTTCATCACCCGCAACGACGCCTACAAGAAAGACAAAAGCTATCTGGCCTCGAGCATCGAGGGGCTCACGAGCCA
GGCCGGAGCGTTCAATAACAGGCTCACCCTCTTCGAGGAAACGGCACGCAAGGATCTGCCGATCATCAAGAACCTGGTGG
CCTACGACGAACTGGCGCGGGAGATCGATGCCCGGGCGCGGCAGAAGCGCGAGGCCATGGCAGCGGCGGTGAAGCCGTAG

Upstream 100 bases:

>100_bases
CTTCAACCTGCCCGGCTGCCATGAAACGCTGGACAGAGAGGCTGGGGGAGGGGTACTATCCCACGTTGTTGCGCATCACC
TGAAGAAAGGAACCCCCCCC

Downstream 100 bases:

>100_bases
CGGCTGTGCGGTGACGGCGCTGGTATCGGAAAGGGCGGGGGATAATCCCCGCCCTTTCCTGTTTTCATGGGTCGAATGGG
CTGTGCCATCGACGGGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKTPLIALACMALVLVCSPTSRADDEVLPQPSPPLCEETLKRQDEALAALKAEQSRLEQKIRDMECAPVVSSDELLARNL
HHLQSLAANTRAQRQTMTDFRTFVTWMSSSLAGYEKYIQAGSVVAGAAKVLPIPYAGQASMLTKFVSQGVLSLNAASGSI
ATYLKISDQYLALAGGIDPKRPDPARVSAAVRFADGEFLRSMTDVQAKLRTSADISASTLSFLKTLDSYVGGSDEYWART
KAFITRNDAYKKDKSYLASSIEGLTSQAGAFNNRLTLFEETARKDLPIIKNLVAYDELAREIDARARQKREAMAAAVKP

Sequences:

>Translated_319_residues
MKTPLIALACMALVLVCSPTSRADDEVLPQPSPPLCEETLKRQDEALAALKAEQSRLEQKIRDMECAPVVSSDELLARNL
HHLQSLAANTRAQRQTMTDFRTFVTWMSSSLAGYEKYIQAGSVVAGAAKVLPIPYAGQASMLTKFVSQGVLSLNAASGSI
ATYLKISDQYLALAGGIDPKRPDPARVSAAVRFADGEFLRSMTDVQAKLRTSADISASTLSFLKTLDSYVGGSDEYWART
KAFITRNDAYKKDKSYLASSIEGLTSQAGAFNNRLTLFEETARKDLPIIKNLVAYDELAREIDARARQKREAMAAAVKP
>Mature_319_residues
MKTPLIALACMALVLVCSPTSRADDEVLPQPSPPLCEETLKRQDEALAALKAEQSRLEQKIRDMECAPVVSSDELLARNL
HHLQSLAANTRAQRQTMTDFRTFVTWMSSSLAGYEKYIQAGSVVAGAAKVLPIPYAGQASMLTKFVSQGVLSLNAASGSI
ATYLKISDQYLALAGGIDPKRPDPARVSAAVRFADGEFLRSMTDVQAKLRTSADISASTLSFLKTLDSYVGGSDEYWART
KAFITRNDAYKKDKSYLASSIEGLTSQAGAFNNRLTLFEETARKDLPIIKNLVAYDELAREIDARARQKREAMAAAVKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34778; Mature: 34778

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPLIALACMALVLVCSPTSRADDEVLPQPSPPLCEETLKRQDEALAALKAEQSRLEQK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IRDMECAPVVSSDELLARNLHHLQSLAANTRAQRQTMTDFRTFVTWMSSSLAGYEKYIQA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSVVAGAAKVLPIPYAGQASMLTKFVSQGVLSLNAASGSIATYLKISDQYLALAGGIDPK
CCHHHCCHHHCCCCCCCHHHHHHHHHHCCHHEEECCCCCEEEEEEECCHHHEEECCCCCC
RPDPARVSAAVRFADGEFLRSMTDVQAKLRTSADISASTLSFLKTLDSYVGGSDEYWART
CCCCHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
KAFITRNDAYKKDKSYLASSIEGLTSQAGAFNNRLTLFEETARKDLPIIKNLVAYDELAR
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
EIDARARQKREAMAAAVKP
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTPLIALACMALVLVCSPTSRADDEVLPQPSPPLCEETLKRQDEALAALKAEQSRLEQK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IRDMECAPVVSSDELLARNLHHLQSLAANTRAQRQTMTDFRTFVTWMSSSLAGYEKYIQA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSVVAGAAKVLPIPYAGQASMLTKFVSQGVLSLNAASGSIATYLKISDQYLALAGGIDPK
CCHHHCCHHHCCCCCCCHHHHHHHHHHCCHHEEECCCCCEEEEEEECCHHHEEECCCCCC
RPDPARVSAAVRFADGEFLRSMTDVQAKLRTSADISASTLSFLKTLDSYVGGSDEYWART
CCCCHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
KAFITRNDAYKKDKSYLASSIEGLTSQAGAFNNRLTLFEETARKDLPIIKNLVAYDELAR
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
EIDARARQKREAMAAAVKP
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA