| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222310
Identifier: 78222310
GI number: 78222310
Start: 1215573
End: 1216472
Strand: Reverse
Name: 78222310
Synonym: Gmet_1092
Alternate gene names: NA
Gene position: 1216472-1215573 (Counterclockwise)
Preceding gene: 78222312
Following gene: 78222309
Centisome position: 30.43
GC content: 60.44
Gene sequence:
>900_bases ATGAGCGAGACGATCAAAAAAGCCAAATCCTTTGCCAAGAGCTTTCGGGTGGAAGAGGGTAAGAAGTTCAGGCTCAAGGA CCACGACCCCAACGAGACTCTCGGGCTCAAGCACGAGGAGGGGATCAAGGACCGGTCCGCCGAGTTCCTCCAGCAGGGGG TCGAAATTCTTGCGGAGATGCAGGAGATGCTCTATGCCCAGGACCGGTGGGGACTCCTCCTCATCTTCCAGGCCATGGAT GCGGCCGGGAAAGACGGCGCCATCAAGCACGTCATGTCCGGTGTCAACCCCCAGGGATGCCAGGTTTTCAACTTCAAGGC CCCTTCAGCGGAGGAACTGGATCACGACTTCCTCTGGCGGAGCGGCAAGTGCCTCCCCGAGCGGGGGCGGATCGGCATTT TCAACCGTTCCTACTACGAAGAGGTCCTGGTCGTCAGGGTCCACCGGGAACTCCTCGAAAAGCAGAAGCTCCCGCCGCAA CTGGTGACGAAAGATATCTGGAAGGAGCGTTACGAGGACATCAACGCCTACGAGCGCTACCTGACCCGCAACGGCATCGC CATCCGCAAATTTTTTCTCAACGTGTCGCGGGGGGAGCAGAAGAAGCGCTTCCTGGAGCGGCTCGACAATCCGGACAAGA ACTGGAAATTCTCGGTGGCCGATGCCCAGGAGCGCCGGCACTGGGACAAATACATGGACGCCTACGAGGATATGATCCGT CACACCGCCACTGAATACGCCCCCTGGTATGTGGTGCCGGCGGACAACAAGTGGTTCAGCCGCCTGGTGGTGGCGGGAGG CATCATCGAGGCCCTCGACGGGCTGCAACTCGCCTACCCCGAGGTGGACGAGGCGAAACGGAAGGAGTTGGCCGCGGCCC GGGCGATGCTTGAGGGGTGA
Upstream 100 bases:
>100_bases CCAGCGTTTCATGGCAGCCGGGCAGGTTGAAGCAGGGAGCGCCCGTGGTAGTATGGATAGGTCGGGAATCGCCCCAGTGG GGCCAACGAGGAGCCAAACC
Downstream 100 bases:
>100_bases AACAGGGCATGGCGGGAAAGGGGCATATTCCTCGAAAGACCTTGACAGCCGTACCCGAACTTCCTATCTTTTGAACAATT ACTGCGCCTCGGCGCCTCAC
Product: polyphosphate:AMP phosphotransferase
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSETIKKAKSFAKSFRVEEGKKFRLKDHDPNETLGLKHEEGIKDRSAEFLQQGVEILAEMQEMLYAQDRWGLLLIFQAMD AAGKDGAIKHVMSGVNPQGCQVFNFKAPSAEELDHDFLWRSGKCLPERGRIGIFNRSYYEEVLVVRVHRELLEKQKLPPQ LVTKDIWKERYEDINAYERYLTRNGIAIRKFFLNVSRGEQKKRFLERLDNPDKNWKFSVADAQERRHWDKYMDAYEDMIR HTATEYAPWYVVPADNKWFSRLVVAGGIIEALDGLQLAYPEVDEAKRKELAAARAMLEG
Sequences:
>Translated_299_residues MSETIKKAKSFAKSFRVEEGKKFRLKDHDPNETLGLKHEEGIKDRSAEFLQQGVEILAEMQEMLYAQDRWGLLLIFQAMD AAGKDGAIKHVMSGVNPQGCQVFNFKAPSAEELDHDFLWRSGKCLPERGRIGIFNRSYYEEVLVVRVHRELLEKQKLPPQ LVTKDIWKERYEDINAYERYLTRNGIAIRKFFLNVSRGEQKKRFLERLDNPDKNWKFSVADAQERRHWDKYMDAYEDMIR HTATEYAPWYVVPADNKWFSRLVVAGGIIEALDGLQLAYPEVDEAKRKELAAARAMLEG >Mature_298_residues SETIKKAKSFAKSFRVEEGKKFRLKDHDPNETLGLKHEEGIKDRSAEFLQQGVEILAEMQEMLYAQDRWGLLLIFQAMDA AGKDGAIKHVMSGVNPQGCQVFNFKAPSAEELDHDFLWRSGKCLPERGRIGIFNRSYYEEVLVVRVHRELLEKQKLPPQL VTKDIWKERYEDINAYERYLTRNGIAIRKFFLNVSRGEQKKRFLERLDNPDKNWKFSVADAQERRHWDKYMDAYEDMIRH TATEYAPWYVVPADNKWFSRLVVAGGIIEALDGLQLAYPEVDEAKRKELAAARAMLEG
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 34863; Mature: 34732
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETIKKAKSFAKSFRVEEGKKFRLKDHDPNETLGLKHEEGIKDRSAEFLQQGVEILAEM CCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QEMLYAQDRWGLLLIFQAMDAAGKDGAIKHVMSGVNPQGCQVFNFKAPSAEELDHDFLWR HHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEECCCCCHHHCCHHHHHC SGKCLPERGRIGIFNRSYYEEVLVVRVHRELLEKQKLPPQLVTKDIWKERYEDINAYERY CCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LTRNGIAIRKFFLNVSRGEQKKRFLERLDNPDKNWKFSVADAQERRHWDKYMDAYEDMIR HHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH HTATEYAPWYVVPADNKWFSRLVVAGGIIEALDGLQLAYPEVDEAKRKELAAARAMLEG HHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SETIKKAKSFAKSFRVEEGKKFRLKDHDPNETLGLKHEEGIKDRSAEFLQQGVEILAEM CHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QEMLYAQDRWGLLLIFQAMDAAGKDGAIKHVMSGVNPQGCQVFNFKAPSAEELDHDFLWR HHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEECCCCCHHHCCHHHHHC SGKCLPERGRIGIFNRSYYEEVLVVRVHRELLEKQKLPPQLVTKDIWKERYEDINAYERY CCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LTRNGIAIRKFFLNVSRGEQKKRFLERLDNPDKNWKFSVADAQERRHWDKYMDAYEDMIR HHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH HTATEYAPWYVVPADNKWFSRLVVAGGIIEALDGLQLAYPEVDEAKRKELAAARAMLEG HHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]