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The map label for this gene is 78222288

Identifier: 78222288

GI number: 78222288

Start: 1191984

End: 1192598

Strand: Direct

Name: 78222288

Synonym: Gmet_1070

Alternate gene names: NA

Gene position: 1191984-1192598 (Clockwise)

Preceding gene: 78222286

Following gene: 78222289

Centisome position: 29.82

GC content: 59.02

Gene sequence:

>615_bases
ATGAACGAACCCACCGACCCCATCATGATCTCCGCCCTGGAGCATTACAGCTACTGCCCGCGTCAGTGCGCCCTGATCCA
CGTGGAGCAGGTGTGGGGCGAAAATCTCTACACCATGCGCGGCCGCGACGTGCATGAGAACGTGGATATGGAGTCGTCCC
ATGACGTTGCGGGCATCCGCTACGAGCGGGCGCTCCCCCTCTGGTCGAAACGGCTTAACCTTATTGGCAAGGCCGATCTG
GTGGAATTTCACGGTGAAACTCCCTATCCGGTGGAGTACAAATCGGGCAGGCACCGGGACGGCCGCCATGAGGCGCTGCA
ACTCTGTGCCCAAGCCATCTGCCTCGAAGAGATGTTCGGGGTTGCGGTGGAGAAGGGAGCGCTCTTCTGGCATGGTTCGC
GGGAGAGGAGGGAAGTTGTTTTTACCGACGTAATACGGGAGCACGTAGAGAAAGCGGCAGAAGGTGTCTTTGCACTGATT
GCGCAATCCACCGTCCCGCCGCCGGTGAACGACAAGCGCTGCACCCATTGCTCACTGAAGGAATCATGTCTTCCCGCCGT
CGTTGCCGAGAAGGACAGAAGCCGCAGGGTGGCGCGGGAATTGTTTGAAATTTGA

Upstream 100 bases:

>100_bases
AGGTTTAGTTTTTCAACAACCTGTTAGGGGCAATTCACGCATTGCCCTAATGATGACACAACGATTGGGCAATTCATGAA
TTGCCCCTACAAGGATTGTT

Downstream 100 bases:

>100_bases
GGGGGGATGGATGGAAACGAAGTTGGTTGTTTTTCAGAGTAAGGAGATTAGGCGCCTACTGGTGGATAATGTCTGGTTCT
TTGCCGTTGTTGATGTGATA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein; RecB Family Exonuclease; CRISPR-Associated Cas1/Cas4 Family Protein; CRISPR-Associated Exonuclease Cas4 Family; Endonuclease; Cas4 Family CRISPR-Associated Protein; Exonuclease RecB Family Protein; Exonuclease N; CRISPR-Associated ; CRISPR-Associated Cas1 Family Protein; PE-PGRS Family Protein; CRISPR-Associated Protein; CRISPR-Associated RecB Family Exonuclease Cas4b; RecB Family Exonuclease Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNEPTDPIMISALEHYSYCPRQCALIHVEQVWGENLYTMRGRDVHENVDMESSHDVAGIRYERALPLWSKRLNLIGKADL
VEFHGETPYPVEYKSGRHRDGRHEALQLCAQAICLEEMFGVAVEKGALFWHGSRERREVVFTDVIREHVEKAAEGVFALI
AQSTVPPPVNDKRCTHCSLKESCLPAVVAEKDRSRRVARELFEI

Sequences:

>Translated_204_residues
MNEPTDPIMISALEHYSYCPRQCALIHVEQVWGENLYTMRGRDVHENVDMESSHDVAGIRYERALPLWSKRLNLIGKADL
VEFHGETPYPVEYKSGRHRDGRHEALQLCAQAICLEEMFGVAVEKGALFWHGSRERREVVFTDVIREHVEKAAEGVFALI
AQSTVPPPVNDKRCTHCSLKESCLPAVVAEKDRSRRVARELFEI
>Mature_204_residues
MNEPTDPIMISALEHYSYCPRQCALIHVEQVWGENLYTMRGRDVHENVDMESSHDVAGIRYERALPLWSKRLNLIGKADL
VEFHGETPYPVEYKSGRHRDGRHEALQLCAQAICLEEMFGVAVEKGALFWHGSRERREVVFTDVIREHVEKAAEGVFALI
AQSTVPPPVNDKRCTHCSLKESCLPAVVAEKDRSRRVARELFEI

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23326; Mature: 23326

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEPTDPIMISALEHYSYCPRQCALIHVEQVWGENLYTMRGRDVHENVDMESSHDVAGIR
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEE
YERALPLWSKRLNLIGKADLVEFHGETPYPVEYKSGRHRDGRHEALQLCAQAICLEEMFG
HHHCCHHHHHHHHHHCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VAVEKGALFWHGSRERREVVFTDVIREHVEKAAEGVFALIAQSTVPPPVNDKRCTHCSLK
HHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
ESCLPAVVAEKDRSRRVARELFEI
HHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MNEPTDPIMISALEHYSYCPRQCALIHVEQVWGENLYTMRGRDVHENVDMESSHDVAGIR
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEE
YERALPLWSKRLNLIGKADLVEFHGETPYPVEYKSGRHRDGRHEALQLCAQAICLEEMFG
HHHCCHHHHHHHHHHCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VAVEKGALFWHGSRERREVVFTDVIREHVEKAAEGVFALIAQSTVPPPVNDKRCTHCSLK
HHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
ESCLPAVVAEKDRSRRVARELFEI
HHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA