| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222267
Identifier: 78222267
GI number: 78222267
Start: 1165608
End: 1166558
Strand: Reverse
Name: 78222267
Synonym: Gmet_1049
Alternate gene names: NA
Gene position: 1166558-1165608 (Counterclockwise)
Preceding gene: 78222268
Following gene: 78222266
Centisome position: 29.18
GC content: 48.37
Gene sequence:
>951_bases ATGACCTCTCTTCATGAAGATTTCTGGTATAGAACGCTTTTCAAACTGCGACTATATGAGGCCTCTGGAAATGCGTTTCA GAGGCTCTTCAGCGAGGTAATGCAGCAAGCTCTTCCAGGATTTCAGGCCGTTGCTCCGTGGGGAAACTGGGGAGATGGCG GTAATGACGGTTGGTGCCCACCAGAAAACCGGTACTTTCAGGTTTATGGGCCGGAGGCGACAACAGAAGTGAACGTTGTA CAGGCGGCGACAAAGGCTGTCGGCGATTTTGCGAAGCTGAGGAAAAAATGGCCAGGCGTTGAGCGCTACCATTTTGTTTG CAATGATCGCTATTGCGGGATGCCGGCACCCATCGGAAGTATGCTGCTGGATTTGGCCAAACAGGAAAAGCTACTTGAAG CCACCCCGTTTTCGTCGGCTGACCTAACAGCTCGGTTCATAAGCTTAAAGGATTCGCAAAAAGTGGCGATTGTATATGGA ATACCGTCAGAACTCCCGGACTTTATCGATCCGCATGCAGTAAGCGAGTTGCTTACCGGTCTTGCCGATGGTGACAATAC TCATCCTTCACTACTGGATGGAGTAAGCCCTGATTTTGATGCGAAGATTAAACTCAATGGGATAAAATCGCCTGTTTCAG AGTCGCTAAGTTACTACTTTTATCAAGTTGCTGATGTTGACCGATTCCTGAATGCTAGGGACATCGGCTTAGCCCAAAAA ATCGCCTTCGAGATCAAAGCCCTGTACCATGACAGTAAAAAGGTCATCCCAAATTCCGCAGATGCGCCTAATGAGCGGTA TGTCTGGCTAATAGACAGGCTTATTCCTACCTCACTACCACGTCATCCGCATTCCATGAAGGCATATCGACAGGCTGCCC AGGTTATTATCGCCAAGTATTTTGAAACGTGTGACGCATATGAGCATCCGAACAGCTTTAATCCCGCATAA
Upstream 100 bases:
>100_bases CGAACTGCTGAGCCAGCCGAGACCATATTATCTTGTTTTAACTATCTACGTTGCCATGTTATAAACCAGTTCAAGTTGCG ACCCTGTCGACGAGGATTCC
Downstream 100 bases:
>100_bases ACACGTCCGCTTCAGTGACTCGATTGTTGGCTTGTCGGGATATCTGCGACACCTCTTGGTGGAGCCGCATACTCTCGACG AGCTATGGACTCAAGTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTSLHEDFWYRTLFKLRLYEASGNAFQRLFSEVMQQALPGFQAVAPWGNWGDGGNDGWCPPENRYFQVYGPEATTEVNVV QAATKAVGDFAKLRKKWPGVERYHFVCNDRYCGMPAPIGSMLLDLAKQEKLLEATPFSSADLTARFISLKDSQKVAIVYG IPSELPDFIDPHAVSELLTGLADGDNTHPSLLDGVSPDFDAKIKLNGIKSPVSESLSYYFYQVADVDRFLNARDIGLAQK IAFEIKALYHDSKKVIPNSADAPNERYVWLIDRLIPTSLPRHPHSMKAYRQAAQVIIAKYFETCDAYEHPNSFNPA
Sequences:
>Translated_316_residues MTSLHEDFWYRTLFKLRLYEASGNAFQRLFSEVMQQALPGFQAVAPWGNWGDGGNDGWCPPENRYFQVYGPEATTEVNVV QAATKAVGDFAKLRKKWPGVERYHFVCNDRYCGMPAPIGSMLLDLAKQEKLLEATPFSSADLTARFISLKDSQKVAIVYG IPSELPDFIDPHAVSELLTGLADGDNTHPSLLDGVSPDFDAKIKLNGIKSPVSESLSYYFYQVADVDRFLNARDIGLAQK IAFEIKALYHDSKKVIPNSADAPNERYVWLIDRLIPTSLPRHPHSMKAYRQAAQVIIAKYFETCDAYEHPNSFNPA >Mature_315_residues TSLHEDFWYRTLFKLRLYEASGNAFQRLFSEVMQQALPGFQAVAPWGNWGDGGNDGWCPPENRYFQVYGPEATTEVNVVQ AATKAVGDFAKLRKKWPGVERYHFVCNDRYCGMPAPIGSMLLDLAKQEKLLEATPFSSADLTARFISLKDSQKVAIVYGI PSELPDFIDPHAVSELLTGLADGDNTHPSLLDGVSPDFDAKIKLNGIKSPVSESLSYYFYQVADVDRFLNARDIGLAQKI AFEIKALYHDSKKVIPNSADAPNERYVWLIDRLIPTSLPRHPHSMKAYRQAAQVIIAKYFETCDAYEHPNSFNPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35491; Mature: 35360
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLHEDFWYRTLFKLRLYEASGNAFQRLFSEVMQQALPGFQAVAPWGNWGDGGNDGWCP CCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCC PENRYFQVYGPEATTEVNVVQAATKAVGDFAKLRKKWPGVERYHFVCNDRYCGMPAPIGS CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHH MLLDLAKQEKLLEATPFSSADLTARFISLKDSQKVAIVYGIPSELPDFIDPHAVSELLTG HHHHHHHHHHHHHCCCCCCCCHHEEEEEECCCCEEEEEEECCHHCHHHCCHHHHHHHHHH LADGDNTHPSLLDGVSPDFDAKIKLNGIKSPVSESLSYYFYQVADVDRFLNARDIGLAQK HCCCCCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCHHHH IAFEIKALYHDSKKVIPNSADAPNERYVWLIDRLIPTSLPRHPHSMKAYRQAAQVIIAKY HHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHH FETCDAYEHPNSFNPA HHHHHHHCCCCCCCCC >Mature Secondary Structure TSLHEDFWYRTLFKLRLYEASGNAFQRLFSEVMQQALPGFQAVAPWGNWGDGGNDGWCP CCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCC PENRYFQVYGPEATTEVNVVQAATKAVGDFAKLRKKWPGVERYHFVCNDRYCGMPAPIGS CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHH MLLDLAKQEKLLEATPFSSADLTARFISLKDSQKVAIVYGIPSELPDFIDPHAVSELLTG HHHHHHHHHHHHHCCCCCCCCHHEEEEEECCCCEEEEEEECCHHCHHHCCHHHHHHHHHH LADGDNTHPSLLDGVSPDFDAKIKLNGIKSPVSESLSYYFYQVADVDRFLNARDIGLAQK HCCCCCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCHHHH IAFEIKALYHDSKKVIPNSADAPNERYVWLIDRLIPTSLPRHPHSMKAYRQAAQVIIAKY HHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHH FETCDAYEHPNSFNPA HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA