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The map label for this gene is ydgM [C]

Identifier: 78222251

GI number: 78222251

Start: 1148853

End: 1149077

Strand: Reverse

Name: ydgM [C]

Synonym: Gmet_1033

Alternate gene names: 78222251

Gene position: 1149077-1148853 (Counterclockwise)

Preceding gene: 78222253

Following gene: 78222249

Centisome position: 28.75

GC content: 53.33

Gene sequence:

>225_bases
ATGTTTACGGATAATTTGGCTCAGACCAAAAACCTTTATAAGGAGGTAGGACCAGTGGCTCACGTTATTTCTGATGACTG
TACTAACTGCGGTTCCTGTGTCGATTCCTGCCCGGTGAACGCCATCGCCCCGGCCGGTGACAAGCACAAAATTGACGGTG
ACACCTGCATCGACTGTGGTGCCTGTGTCGACACCTGCCCGACCAGCGCCATCAGCGCTGCTTAA

Upstream 100 bases:

>100_bases
TTTTTTATATATACAATACAGGTGGCTTAAATTCAAGTTTTTTGTGAACTCCAACTCTGGGGCAGCACCTTTCTGCTGGA
CTTCAGGAACCCGCCGTGCT

Downstream 100 bases:

>100_bases
TTCGTCAGGTTTCAGCATGCGAAGCCGGTCCGAGCAATCGGAACCGGCTTCTTTTTTTGCGCGTCCATAAAAAAAGGCCG
GAACGAATCCGGCCTTCAAT

Product: 4Fe-4S ferredoxin, iron-sulfur binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MFTDNLAQTKNLYKEVGPVAHVISDDCTNCGSCVDSCPVNAIAPAGDKHKIDGDTCIDCGACVDTCPTSAISAA

Sequences:

>Translated_74_residues
MFTDNLAQTKNLYKEVGPVAHVISDDCTNCGSCVDSCPVNAIAPAGDKHKIDGDTCIDCGACVDTCPTSAISAA
>Mature_74_residues
MFTDNLAQTKNLYKEVGPVAHVISDDCTNCGSCVDSCPVNAIAPAGDKHKIDGDTCIDCGACVDTCPTSAISAA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 7563; Mature: 7563

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
12.2 %Cys+Met (Translated Protein)
10.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
12.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTDNLAQTKNLYKEVGPVAHVISDDCTNCGSCVDSCPVNAIAPAGDKHKIDGDTCIDCG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
ACVDTCPTSAISAA
CHHHHCCCCCCCCC
>Mature Secondary Structure
MFTDNLAQTKNLYKEVGPVAHVISDDCTNCGSCVDSCPVNAIAPAGDKHKIDGDTCIDCG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
ACVDTCPTSAISAA
CHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 4768897; 4934841 [H]