| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222194
Identifier: 78222194
GI number: 78222194
Start: 1082250
End: 1082798
Strand: Direct
Name: 78222194
Synonym: Gmet_0974
Alternate gene names: NA
Gene position: 1082250-1082798 (Clockwise)
Preceding gene: 78222193
Following gene: 78222195
Centisome position: 27.07
GC content: 58.47
Gene sequence:
>549_bases ATGACAAGAAGAAATAGCACCAGCATGCTCCTCCTTGCCGCAGCGGCCTCACTGGTCCTGGCGTGCGGAGGGTGCAAAAA GGCCGAAGAGAGTCCCCCGCCGGCCCCCCCCGCGAAACCGGCCAACCCGGTCAAGCCTCCCGTGCAGGCTCAGGCCTCGT CAGCCCAATCCGTGGCAAGTGTTAATCCGTCACTGGATTTTTCCGGCCGCAAAGATCCCTTCAAGCCGTTCATTCAACCC AAGGCCGAGAAACCGGCCGCTGCCAGCGGCTCCATTCCCGCCGCCGGCGCACTTCCCATCCAGGGCTATCCGGTGGAGCA GTTCAAAGTCTCCGGCATCATTGCCGGATTCAAGGAAAACAAGGCTCTTATCGTCGACCCAGCCGGCAAGGGATACGTGG TCAAGGCAGGGATGAAAATGGGCAACAACAATGGCGTGATAATGAGAATCACCCCGTCATACCTTGAAGTTGCTGAACGC GTCAGGAACGACGTCACCGGCAAAATAAGCCGGCGGTTGGTGAAACTCGCCCTGCCAAAGAAAAACTAA
Upstream 100 bases:
>100_bases GTCTCCTTTGCAGACATTAAGCAGGCGGGAGGCAAGACCAGCGTCAAAGTGAACTGTCTCGCCACGACGTTCCGTTTCCT CGACAAGAAAGAGACCAAGG
Downstream 100 bases:
>100_bases CAGGCTGCCAAGGAGACTCCCCATGAGAATCCAACTCACAATATCCCGCAACCTTGCCTTTCTGTCCCTGTTGGGCGCGT TGTGCGGCTGTGCCGCCACT
Product: putative type IV pilus assembly protein PilP
Products: NA
Alternate protein names: Type IV Pilus Assembly Lipoprotein PilP; Pilus Assembly Protein PilP-Like; Lipoprotein
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTRRNSTSMLLLAAAASLVLACGGCKKAEESPPPAPPAKPANPVKPPVQAQASSAQSVASVNPSLDFSGRKDPFKPFIQP KAEKPAAASGSIPAAGALPIQGYPVEQFKVSGIIAGFKENKALIVDPAGKGYVVKAGMKMGNNNGVIMRITPSYLEVAER VRNDVTGKISRRLVKLALPKKN
Sequences:
>Translated_182_residues MTRRNSTSMLLLAAAASLVLACGGCKKAEESPPPAPPAKPANPVKPPVQAQASSAQSVASVNPSLDFSGRKDPFKPFIQP KAEKPAAASGSIPAAGALPIQGYPVEQFKVSGIIAGFKENKALIVDPAGKGYVVKAGMKMGNNNGVIMRITPSYLEVAER VRNDVTGKISRRLVKLALPKKN >Mature_181_residues TRRNSTSMLLLAAAASLVLACGGCKKAEESPPPAPPAKPANPVKPPVQAQASSAQSVASVNPSLDFSGRKDPFKPFIQPK AEKPAAASGSIPAAGALPIQGYPVEQFKVSGIIAGFKENKALIVDPAGKGYVVKAGMKMGNNNGVIMRITPSYLEVAERV RNDVTGKISRRLVKLALPKKN
Specific function: Unknown
COG id: COG3168
COG function: function code NU; Tfp pilus assembly protein PilP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18985; Mature: 18854
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRNSTSMLLLAAAASLVLACGGCKKAEESPPPAPPAKPANPVKPPVQAQASSAQSVAS CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHH VNPSLDFSGRKDPFKPFIQPKAEKPAAASGSIPAAGALPIQGYPVEQFKVSGIIAGFKEN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEEECCCC KALIVDPAGKGYVVKAGMKMGNNNGVIMRITPSYLEVAERVRNDVTGKISRRLVKLALPK CEEEECCCCCCEEEEECEEECCCCCEEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHCCC KN CC >Mature Secondary Structure TRRNSTSMLLLAAAASLVLACGGCKKAEESPPPAPPAKPANPVKPPVQAQASSAQSVAS CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHH VNPSLDFSGRKDPFKPFIQPKAEKPAAASGSIPAAGALPIQGYPVEQFKVSGIIAGFKEN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEEECCCC KALIVDPAGKGYVVKAGMKMGNNNGVIMRITPSYLEVAERVRNDVTGKISRRLVKLALPK CEEEECCCCCCEEEEECEEECCCCCEEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHCCC KN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA