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The map label for this gene is secF

Identifier: 78222075

GI number: 78222075

Start: 941931

End: 942839

Strand: Direct

Name: secF

Synonym: Gmet_0855

Alternate gene names: 78222075

Gene position: 941931-942839 (Clockwise)

Preceding gene: 78222074

Following gene: 78222076

Centisome position: 23.56

GC content: 56.99

Gene sequence:

>909_bases
ATGGAATTTATCGGCAAGACACATATCGATTTTATGGGGATGAAGAAGTTTTCCTTCGCCATTTCCATTGTCATAGCGAT
TCTCGGCATTATCGGCATCGTGCGGATTGCCCTCGGGACAGCCAACATGGGGATCGACTTCTCCGGAGGCACCGCCGTGC
AGCTCAAATTCGCCCAGCCGGTGCATATCGACCGGGCCCGTGAGGCCTTGGCGAAGCACGGTATCCATGACGCCAACCTT
CAGGAGCTCAAGACGGGGAACAAACTCCTCGTGAAGGTAGGGAAGACCTCACTCCCCCAGGGGAACGCGGCGGACCTGAT
CCAGACTGCCTTCCAGAAAGAGTTGACCGGCAATACCTTCGTGGTTGAAAGCTCCACCGAGATCGGCCCTGCCATCGGCG
ACAAGCTCCGCAAGGACACCCTGGTCGCCGTGGCCATCTCCATGATCGGCATCCTCATCTACATTGCCTGGCGGTTCGAC
TTTACCTTCGGCGTGGGAGCGCTCGTTGCAACGCTTCACGACGTCCTCGCCATGTTTGCCGTCTTTTTCCTCCTGGACAA
GGAGGTCAATCTCCTCTTCATTACGGCGGTCCTCACCATCGCCGGCTATTCACTCACCGATACCGTGGTCGTCTTTGACC
GCATCCGGGAGAATCTCCATAAGAACACCAAGGATTCGCTGGAGACGATCTTCAACTTCAGCATCAACGAAGTCCTTTCC
CGGACCATTATTACGGCACTTACCACCTTCCTGGCCGCCGGCTCCCTTTACTTCTTCGGCGGCGAGGTTATCCATGACTT
TGCCCTGGCCCTTGTGGTCGGCATCCTCGTCGGTGTCTACTCATCCGTGTTCGTGGCGAGTCCCATTGTCGAGGTCTGGG
GGCGTCGTCCCAAGGCCAGCAAGGCTTGA

Upstream 100 bases:

>100_bases
TATCATCAACCTGTTCACCGCTCTCGTGGGCACCAAGTCAATTTTCGACTTCGCCCTTTCGCGCCTGCGGATCAAGCGTC
TGAGCATCTAGGGGGAGTCC

Downstream 100 bases:

>100_bases
CGTCAAGAGGAGACGATGATGAATAAGGAAACTGTGCTTTACGTGGTCATTGCGCTTCTTGTCGGCATCCTCGGCACCGT
TCTCGTGGTCGGCGTGGTCA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MEFIGKTHIDFMGMKKFSFAISIVIAILGIIGIVRIALGTANMGIDFSGGTAVQLKFAQPVHIDRAREALAKHGIHDANL
QELKTGNKLLVKVGKTSLPQGNAADLIQTAFQKELTGNTFVVESSTEIGPAIGDKLRKDTLVAVAISMIGILIYIAWRFD
FTFGVGALVATLHDVLAMFAVFFLLDKEVNLLFITAVLTIAGYSLTDTVVVFDRIRENLHKNTKDSLETIFNFSINEVLS
RTIITALTTFLAAGSLYFFGGEVIHDFALALVVGILVGVYSSVFVASPIVEVWGRRPKASKA

Sequences:

>Translated_302_residues
MEFIGKTHIDFMGMKKFSFAISIVIAILGIIGIVRIALGTANMGIDFSGGTAVQLKFAQPVHIDRAREALAKHGIHDANL
QELKTGNKLLVKVGKTSLPQGNAADLIQTAFQKELTGNTFVVESSTEIGPAIGDKLRKDTLVAVAISMIGILIYIAWRFD
FTFGVGALVATLHDVLAMFAVFFLLDKEVNLLFITAVLTIAGYSLTDTVVVFDRIRENLHKNTKDSLETIFNFSINEVLS
RTIITALTTFLAAGSLYFFGGEVIHDFALALVVGILVGVYSSVFVASPIVEVWGRRPKASKA
>Mature_302_residues
MEFIGKTHIDFMGMKKFSFAISIVIAILGIIGIVRIALGTANMGIDFSGGTAVQLKFAQPVHIDRAREALAKHGIHDANL
QELKTGNKLLVKVGKTSLPQGNAADLIQTAFQKELTGNTFVVESSTEIGPAIGDKLRKDTLVAVAISMIGILIYIAWRFD
FTFGVGALVATLHDVLAMFAVFFLLDKEVNLLFITAVLTIAGYSLTDTVVVFDRIRENLHKNTKDSLETIFNFSINEVLS
RTIITALTTFLAAGSLYFFGGEVIHDFALALVVGILVGVYSSVFVASPIVEVWGRRPKASKA

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=286, Percent_Identity=32.1678321678322, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 32724; Mature: 32724

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFIGKTHIDFMGMKKFSFAISIVIAILGIIGIVRIALGTANMGIDFSGGTAVQLKFAQP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCC
VHIDRAREALAKHGIHDANLQELKTGNKLLVKVGKTSLPQGNAADLIQTAFQKELTGNTF
CCHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEE
VVESSTEIGPAIGDKLRKDTLVAVAISMIGILIYIAWRFDFTFGVGALVATLHDVLAMFA
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFFLLDKEVNLLFITAVLTIAGYSLTDTVVVFDRIRENLHKNTKDSLETIFNFSINEVLS
HHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH
RTIITALTTFLAAGSLYFFGGEVIHDFALALVVGILVGVYSSVFVASPIVEVWGRRPKAS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KA
CC
>Mature Secondary Structure
MEFIGKTHIDFMGMKKFSFAISIVIAILGIIGIVRIALGTANMGIDFSGGTAVQLKFAQP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCC
VHIDRAREALAKHGIHDANLQELKTGNKLLVKVGKTSLPQGNAADLIQTAFQKELTGNTF
CCHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEE
VVESSTEIGPAIGDKLRKDTLVAVAISMIGILIYIAWRFDFTFGVGALVATLHDVLAMFA
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFFLLDKEVNLLFITAVLTIAGYSLTDTVVVFDRIRENLHKNTKDSLETIFNFSINEVLS
HHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH
RTIITALTTFLAAGSLYFFGGEVIHDFALALVVGILVGVYSSVFVASPIVEVWGRRPKAS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA