| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is flr [H]
Identifier: 78222025
GI number: 78222025
Start: 884699
End: 885265
Strand: Direct
Name: flr [H]
Synonym: Gmet_0805
Alternate gene names: 78222025
Gene position: 884699-885265 (Clockwise)
Preceding gene: 78222024
Following gene: 78222026
Centisome position: 22.13
GC content: 60.14
Gene sequence:
>567_bases ATGAAACAATCCCTGGGGGCCAAGACCCTCCTTTTTCCGGCTCCTGTCCTGATGGTCGGCACCTATGACCACGAGGGGAA GCCAAATCTGATGAATGCCGCTTGGGGCGGAATCTGTTGTTCCCAGCCCCCGTGCGTTGCGGTATCCTTGCGCAAGGCGA CCTATTCCTACGCCTCGATCGTGGAGCGCAAGGCCTTCACTATTGGAACTCCGTCGGAAGCCGCCATGAAGGCGGCCGAT TACGTCGGCATTGTCTCGGGGCGCGACACGGATAAGTTTGCCGCTACTGGACTTACGCCGGTAAAAAGTGAACTTGTGGA CGCCCCCTACGCGGCGGAGTTCCCCTTCGCCCTTGAGTGCCGGCTGCTTCACACCCTGGAAATCGGCCTTCACACCCTGT TCGTCGGCGAAATCGTGGACGTTAAGGCAGACGCCGAAGTGCTCGGCGACGACGGCCTCCCCGACATCCTGAAGCTCAAG CCCCTCGTTTTCGACACCAGCCATCGGGGTTACCACGGTGTTGGTCCGCTGCTGGGCAAGGCGCTTGCCGTGGGGAAAAA GCTATGA
Upstream 100 bases:
>100_bases GGAGGTGATGACCCAGGCGATTCTCCATGGGGGGATCACGGGGCGTGTCGTGGTTAACCTGCAGGAGAGCTGAAAATCTG ATTCACGAGAGGAGAATACC
Downstream 100 bases:
>100_bases ATTCGCCCAAGAGGCTGAAGGGGTAGGTGCCCATGGAATCACGGGAACACCGGGCGGGAAAACTCCTGCTGCTCGCCTGC GTCATCAGCTTTGTCTGCTT
Product: flavin reductase-like, FMN-binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKQSLGAKTLLFPAPVLMVGTYDHEGKPNLMNAAWGGICCSQPPCVAVSLRKATYSYASIVERKAFTIGTPSEAAMKAAD YVGIVSGRDTDKFAATGLTPVKSELVDAPYAAEFPFALECRLLHTLEIGLHTLFVGEIVDVKADAEVLGDDGLPDILKLK PLVFDTSHRGYHGVGPLLGKALAVGKKL
Sequences:
>Translated_188_residues MKQSLGAKTLLFPAPVLMVGTYDHEGKPNLMNAAWGGICCSQPPCVAVSLRKATYSYASIVERKAFTIGTPSEAAMKAAD YVGIVSGRDTDKFAATGLTPVKSELVDAPYAAEFPFALECRLLHTLEIGLHTLFVGEIVDVKADAEVLGDDGLPDILKLK PLVFDTSHRGYHGVGPLLGKALAVGKKL >Mature_188_residues MKQSLGAKTLLFPAPVLMVGTYDHEGKPNLMNAAWGGICCSQPPCVAVSLRKATYSYASIVERKAFTIGTPSEAAMKAAD YVGIVSGRDTDKFAATGLTPVKSELVDAPYAAEFPFALECRLLHTLEIGLHTLFVGEIVDVKADAEVLGDDGLPDILKLK PLVFDTSHRGYHGVGPLLGKALAVGKKL
Specific function: Participates in the reduction of bisulfite from hydrogen [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavoredoxin family [H]
Homologues:
Organism=Escherichia coli, GI87081916, Length=172, Percent_Identity=34.3023255813954, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 19957; Mature: 19957
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSLGAKTLLFPAPVLMVGTYDHEGKPNLMNAAWGGICCSQPPCVAVSLRKATYSYASI CCCCCCCCEEECCCCEEEEECCCCCCCCCCCHHCCCCEECCCCCEEEEEEHHHHHHHHHH VERKAFTIGTPSEAAMKAADYVGIVSGRDTDKFAATGLTPVKSELVDAPYAAEFPFALEC HHHHEEECCCCCHHHHHHHHEEEEECCCCCCCHHHCCCCHHHHHHCCCCCCCCCCEEEHH RLLHTLEIGLHTLFVGEIVDVKADAEVLGDDGLPDILKLKPLVFDTSHRGYHGVGPLLGK HHHHHHHHHHHHHHHHHEEECCCCCCEECCCCCCHHHHCCCEEEECCCCCCCCHHHHHHH ALAVGKKL HHHHCCCC >Mature Secondary Structure MKQSLGAKTLLFPAPVLMVGTYDHEGKPNLMNAAWGGICCSQPPCVAVSLRKATYSYASI CCCCCCCCEEECCCCEEEEECCCCCCCCCCCHHCCCCEECCCCCEEEEEEHHHHHHHHHH VERKAFTIGTPSEAAMKAADYVGIVSGRDTDKFAATGLTPVKSELVDAPYAAEFPFALEC HHHHEEECCCCCHHHHHHHHEEEEECCCCCCCHHHCCCCHHHHHHCCCCCCCCCCEEEHH RLLHTLEIGLHTLFVGEIVDVKADAEVLGDDGLPDILKLKPLVFDTSHRGYHGVGPLLGK HHHHHHHHHHHHHHHHHEEECCCCCCEECCCCCCHHHHCCCEEEECCCCCCCCHHHHHHH ALAVGKKL HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10860809; 8387752 [H]