| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222005
Identifier: 78222005
GI number: 78222005
Start: 866372
End: 867733
Strand: Reverse
Name: 78222005
Synonym: Gmet_0785
Alternate gene names: NA
Gene position: 867733-866372 (Counterclockwise)
Preceding gene: 78222006
Following gene: 78222004
Centisome position: 21.71
GC content: 64.68
Gene sequence:
>1362_bases ATGAGAACACTTCGCGCAGTGGCACTGGCATGTCTGACGGCACTCCCGCTATCCGGGGCGCTGGCCGCCGAACCGGCAAC GGCACCGAAAACCCTCAGCCTTGACGAATGCATCCGGGGCGCCATAGCCACGGCGCCGGAGCTGGGCGAATCCCAGGCAG ACATCGAGCTGGCCCAGTCCAGGCTTGAGGAGGCCAAGGGGTACCGATTCCCGCAGATCGAAATGAAGGCCCTCTTCGGG CCGGTCCCCGAAGCCCGGGGTAACCAGGTCTGGTCGCCGGACGGGTCCAACGACACCGATTCCATCACCTGGTTCGCCCG GGCCGACGCCACCCTGGTCCAGCCCCTCTACACCTTCGGCAAGATCAGCGAAAACATGAAGGCGGCCACCCACGGCATCG AGGTGGACCGGGCCAAGAAGGACCAGCGACGCAACGAGGTGGCGCTCCAGACCAAGGAGTACTACTACGGCGTTCTCCTG GCCCGGGAAATGAGGGAAGTGGTCCTGGAGGTGCGGGAGAACCTGGACAAGGCCCGCAAGAAGGCCCAGGAGCTTCTGGA AAAGTCTTCCCCCAACGTGGAGGAGCTGGACATCTACAAGCTCGACGCCTTTAACGGCGAGGTGGGGAAATACCTGGCCG AGGCCGACAAGGGGGAAACCCTGGCCCTCTCGGCGCTCCGGAGCCGCGTCGGCCTCCCCCCGGAGGCCCGGATCGACATT GCCACCGAGCGACTCGTGCCCGACGAGGGAACCGCCGGCGATCTTCCGGCTTACATCGACGAGGCCCGGGCAAAGCGCCC CGAGTTCAAGCAGCTCAAGGAAGGGCTCCAGGCCCGGGAAGCACTCGTGGAGGCGGCCAAGGCGGCCTACTACCCCGACA TCTTCCTGGCGGGGCTCCTGTCCGGCGCCTATTCCCCCGAGCGGAGCCGCATCGACAACCCCTTCATTACCGACGAGTTC AACCACTTCTGGACGGGAATCGCCCTCGGGGCCAGGTGGAAGCTCGATTTCGGCATCACCGGCTCCAAGGTGGCCGGCGA GCGGGCCCAGTACAACCGGCTCCTCTCCACTAAGGTTTACGCCGACACCAACATCCCCCTCCAGGTGAAAAAGGCGTGGC TGGAGCTGAAGGAGGCGGAGAAGAGCATCGACGCCACCCGGGACGCATACAGCAATGCCAAGAAGTGGATCGTCTCCGCC ATGGCCAACTTCGACTTCGGCGTCGGCCCGGCCAAGGAACTCTTCGACGGGCTCCAGAACTACGCCCGGATGCGGGCCGG CTACTTCCAGTCCATTTACAACCAGAAGATGTCCCGGGCCAACCTGGACTACGCCGTCGGCGCCATGCCGCTGGAGAAAT AA
Upstream 100 bases:
>100_bases GATCAGGGAGACCGAATCGGCAGTTGATCTGGAGGAACTGCTGAGCAAGTACATCCACGGCAAGGTGGAGTGACTGAGCC GCATTCCAGGAGGGAAGGAA
Downstream 100 bases:
>100_bases CCCCGGAGGAACATTGTCATGAAATGGTTTGCCCTGCCGATTCTCTTCATCACCCTCGCCCTTGGCGGGCCGGTCTTCGC CCAAGGAAGCCCCACCCAGA
Product: Outer membrane efflux protein
Products: NA
Alternate protein names: Outer Membrane Protein; Outer Membrane Protein-Like; Outer Membrane Efflux Family Protein
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MRTLRAVALACLTALPLSGALAAEPATAPKTLSLDECIRGAIATAPELGESQADIELAQSRLEEAKGYRFPQIEMKALFG PVPEARGNQVWSPDGSNDTDSITWFARADATLVQPLYTFGKISENMKAATHGIEVDRAKKDQRRNEVALQTKEYYYGVLL AREMREVVLEVRENLDKARKKAQELLEKSSPNVEELDIYKLDAFNGEVGKYLAEADKGETLALSALRSRVGLPPEARIDI ATERLVPDEGTAGDLPAYIDEARAKRPEFKQLKEGLQAREALVEAAKAAYYPDIFLAGLLSGAYSPERSRIDNPFITDEF NHFWTGIALGARWKLDFGITGSKVAGERAQYNRLLSTKVYADTNIPLQVKKAWLELKEAEKSIDATRDAYSNAKKWIVSA MANFDFGVGPAKELFDGLQNYARMRAGYFQSIYNQKMSRANLDYAVGAMPLEK
Sequences:
>Translated_453_residues MRTLRAVALACLTALPLSGALAAEPATAPKTLSLDECIRGAIATAPELGESQADIELAQSRLEEAKGYRFPQIEMKALFG PVPEARGNQVWSPDGSNDTDSITWFARADATLVQPLYTFGKISENMKAATHGIEVDRAKKDQRRNEVALQTKEYYYGVLL AREMREVVLEVRENLDKARKKAQELLEKSSPNVEELDIYKLDAFNGEVGKYLAEADKGETLALSALRSRVGLPPEARIDI ATERLVPDEGTAGDLPAYIDEARAKRPEFKQLKEGLQAREALVEAAKAAYYPDIFLAGLLSGAYSPERSRIDNPFITDEF NHFWTGIALGARWKLDFGITGSKVAGERAQYNRLLSTKVYADTNIPLQVKKAWLELKEAEKSIDATRDAYSNAKKWIVSA MANFDFGVGPAKELFDGLQNYARMRAGYFQSIYNQKMSRANLDYAVGAMPLEK >Mature_453_residues MRTLRAVALACLTALPLSGALAAEPATAPKTLSLDECIRGAIATAPELGESQADIELAQSRLEEAKGYRFPQIEMKALFG PVPEARGNQVWSPDGSNDTDSITWFARADATLVQPLYTFGKISENMKAATHGIEVDRAKKDQRRNEVALQTKEYYYGVLL AREMREVVLEVRENLDKARKKAQELLEKSSPNVEELDIYKLDAFNGEVGKYLAEADKGETLALSALRSRVGLPPEARIDI ATERLVPDEGTAGDLPAYIDEARAKRPEFKQLKEGLQAREALVEAAKAAYYPDIFLAGLLSGAYSPERSRIDNPFITDEF NHFWTGIALGARWKLDFGITGSKVAGERAQYNRLLSTKVYADTNIPLQVKKAWLELKEAEKSIDATRDAYSNAKKWIVSA MANFDFGVGPAKELFDGLQNYARMRAGYFQSIYNQKMSRANLDYAVGAMPLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50218; Mature: 50218
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLRAVALACLTALPLSGALAAEPATAPKTLSLDECIRGAIATAPELGESQADIELAQS CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH RLEEAKGYRFPQIEMKALFGPVPEARGNQVWSPDGSNDTDSITWFARADATLVQPLYTFG HHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH KISENMKAATHGIEVDRAKKDQRRNEVALQTKEYYYGVLLAREMREVVLEVRENLDKARK HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAQELLEKSSPNVEELDIYKLDAFNGEVGKYLAEADKGETLALSALRSRVGLPPEARIDI HHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEH ATERLVPDEGTAGDLPAYIDEARAKRPEFKQLKEGLQAREALVEAAKAAYYPDIFLAGLL HHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SGAYSPERSRIDNPFITDEFNHFWTGIALGARWKLDFGITGSKVAGERAQYNRLLSTKVY HCCCCCCHHHCCCCCCCCCHHHHHHHHEECCEEEEEECCCCCHHCCHHHHHHHHHHHEEE ADTNIPLQVKKAWLELKEAEKSIDATRDAYSNAKKWIVSAMANFDFGVGPAKELFDGLQN ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH YARMRAGYFQSIYNQKMSRANLDYAVGAMPLEK HHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCC >Mature Secondary Structure MRTLRAVALACLTALPLSGALAAEPATAPKTLSLDECIRGAIATAPELGESQADIELAQS CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH RLEEAKGYRFPQIEMKALFGPVPEARGNQVWSPDGSNDTDSITWFARADATLVQPLYTFG HHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH KISENMKAATHGIEVDRAKKDQRRNEVALQTKEYYYGVLLAREMREVVLEVRENLDKARK HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAQELLEKSSPNVEELDIYKLDAFNGEVGKYLAEADKGETLALSALRSRVGLPPEARIDI HHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEH ATERLVPDEGTAGDLPAYIDEARAKRPEFKQLKEGLQAREALVEAAKAAYYPDIFLAGLL HHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SGAYSPERSRIDNPFITDEFNHFWTGIALGARWKLDFGITGSKVAGERAQYNRLLSTKVY HCCCCCCHHHCCCCCCCCCHHHHHHHHEECCEEEEEECCCCCHHCCHHHHHHHHHHHEEE ADTNIPLQVKKAWLELKEAEKSIDATRDAYSNAKKWIVSAMANFDFGVGPAKELFDGLQN ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH YARMRAGYFQSIYNQKMSRANLDYAVGAMPLEK HHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA