| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yjgR [H]
Identifier: 78221987
GI number: 78221987
Start: 843112
End: 844560
Strand: Direct
Name: yjgR [H]
Synonym: Gmet_0767
Alternate gene names: 78221987
Gene position: 843112-844560 (Clockwise)
Preceding gene: 78221986
Following gene: 78221995
Centisome position: 21.09
GC content: 67.63
Gene sequence:
>1449_bases ATGGGTACTGCACTGGACGCACTGCTGATAGCCAAGGGAGAGAAGGAAGTCTGCCTCCTGCCGCGGATGGCCAACCGCCA CGGGCTCGTGGCCGGCGCCACCGGCACCGGCAAGACGGTGACGCTGCGGGTGCTGGCCGAGCGGTTCAGCGCCATCGGCG TGCCGGTCTTCATGGCCGATGTGAAGGGGGACCTGTCGGGGCTGGCCCTGCCGGGGGACGAGAACCCCAAGGTGGCCGAA CGGGTGGCGAAGATGGGGCTTGAGGGATTCGCCTGCAGCGGTTTCCCCGTGGTCTTCTGGGACGTCTTCGGGGAGCAGGG GCACCCGGTCCGGACCACGGTCTCTGAGATGGGGCCGCTTCTCCTGTCGCGGCTCCTGAACCTGAACGACGTCCAGAGCG GGGTCCTCAACGTCATCTTCAAGGTGGCCGACGACAACGGCCTGCTGCTCCTCGACTTCAAGGACCTCCAGGCCATGGTC CGCTACGTGGGGGACAACGCCGCCGAGTTCCAGACCGCCTACGGCAACATCTCCGCCGCCAGCATCGGCGCCATCCAGCG GAACCTCCTGGCCTTGGGCGAGCAGGGGGCGGAGCAGTTCTTCGGGGAGCCGGCCCTGAACCTCCAGGACTTCATGCAGA CCGACTCCGACGGCCGGGGGGTGATCAACATCCTCGCCGCCGACAAGCTGATGCAGTCGCCCAAGCTCTATGCCACCTTC CTCCTCTGGATGCTGTCGGAGCTCTTCGAGCAGCTCCCCGAGGCCGGGGACCCGGAGAAGCCGAACCTGGTCTTTTTCTT CGACGAGGCGCACCTCCTCTTTGACGACGCCCCCAAGGCCCTGGTGGAGAAGATTGAGCAGGTGGTGCGGCTCATCCGCT CCAAGGGGGTGGGGATCTACTTCGTGACCCAGAACCCCGTCGACCTCCCCGATACGGTGCTGGGGCAGCTGGGGAATCGA GTCCAGCACGCCCTGCGGGCCTTCACCCCCAAGGACCAGAAGGGGGTCAGGGCTGCTGCGGAAACCTTCCGGGCCAACCC CGCTTTCTCCGTGGAGACGGTCATCACCCAGCTGGAGGTGGGGGAAGCTCTTGTATCGGTCCTGGACGGGAAGGGGGCCC CCACCGTGGTGGAGCGGGCCCTGGTCTGCCCACCCCAGAGCCGCTTCGCCCCCCTCGCGGGTGCCGAGCGGACCGCGGTC ATCGCCCGCTCGCCCCTGGCCGGTTTCTACGAGAAAGCGGTGGACCGGGAATCGGCCTACGAGACGCTCAAGGCCAAGAC CGAGGCGGCAGCGCCGGCGCCAGAGGAGGGGAAGAGCGAAGTGGCAAGCCAGGTGGGGACGGTGCTCGGGGCCTTTGCCA AGAGCGCGGCCCACGCCATCGGCAGTCAGGTGGGACGCCAGATTATCCGGGGGGGGCTGGGATCCCTCTTTGGCGGAGGG CGGCGGTAA
Upstream 100 bases:
>100_bases GGGTGCTGGGGTGAGGGTGCGTTCCGGTTGGAGAAATGGTTGGCGGTAGTTCAGCGGCAACACTTCAAGAGGATGCCATG AAGGAAAGGGAGGAAGATAT
Downstream 100 bases:
>100_bases CAGCATGCCGGTGCTGGAAACAGCAAAAAGGGCGACCCCTCCAGGTCGCCCTTTTTTTGATAGCATCCGGAATGCCGCTA TCTCGTGAAGTAGCCGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MGTALDALLIAKGEKEVCLLPRMANRHGLVAGATGTGKTVTLRVLAERFSAIGVPVFMADVKGDLSGLALPGDENPKVAE RVAKMGLEGFACSGFPVVFWDVFGEQGHPVRTTVSEMGPLLLSRLLNLNDVQSGVLNVIFKVADDNGLLLLDFKDLQAMV RYVGDNAAEFQTAYGNISAASIGAIQRNLLALGEQGAEQFFGEPALNLQDFMQTDSDGRGVINILAADKLMQSPKLYATF LLWMLSELFEQLPEAGDPEKPNLVFFFDEAHLLFDDAPKALVEKIEQVVRLIRSKGVGIYFVTQNPVDLPDTVLGQLGNR VQHALRAFTPKDQKGVRAAAETFRANPAFSVETVITQLEVGEALVSVLDGKGAPTVVERALVCPPQSRFAPLAGAERTAV IARSPLAGFYEKAVDRESAYETLKAKTEAAAPAPEEGKSEVASQVGTVLGAFAKSAAHAIGSQVGRQIIRGGLGSLFGGG RR
Sequences:
>Translated_482_residues MGTALDALLIAKGEKEVCLLPRMANRHGLVAGATGTGKTVTLRVLAERFSAIGVPVFMADVKGDLSGLALPGDENPKVAE RVAKMGLEGFACSGFPVVFWDVFGEQGHPVRTTVSEMGPLLLSRLLNLNDVQSGVLNVIFKVADDNGLLLLDFKDLQAMV RYVGDNAAEFQTAYGNISAASIGAIQRNLLALGEQGAEQFFGEPALNLQDFMQTDSDGRGVINILAADKLMQSPKLYATF LLWMLSELFEQLPEAGDPEKPNLVFFFDEAHLLFDDAPKALVEKIEQVVRLIRSKGVGIYFVTQNPVDLPDTVLGQLGNR VQHALRAFTPKDQKGVRAAAETFRANPAFSVETVITQLEVGEALVSVLDGKGAPTVVERALVCPPQSRFAPLAGAERTAV IARSPLAGFYEKAVDRESAYETLKAKTEAAAPAPEEGKSEVASQVGTVLGAFAKSAAHAIGSQVGRQIIRGGLGSLFGGG RR >Mature_481_residues GTALDALLIAKGEKEVCLLPRMANRHGLVAGATGTGKTVTLRVLAERFSAIGVPVFMADVKGDLSGLALPGDENPKVAER VAKMGLEGFACSGFPVVFWDVFGEQGHPVRTTVSEMGPLLLSRLLNLNDVQSGVLNVIFKVADDNGLLLLDFKDLQAMVR YVGDNAAEFQTAYGNISAASIGAIQRNLLALGEQGAEQFFGEPALNLQDFMQTDSDGRGVINILAADKLMQSPKLYATFL LWMLSELFEQLPEAGDPEKPNLVFFFDEAHLLFDDAPKALVEKIEQVVRLIRSKGVGIYFVTQNPVDLPDTVLGQLGNRV QHALRAFTPKDQKGVRAAAETFRANPAFSVETVITQLEVGEALVSVLDGKGAPTVVERALVCPPQSRFAPLAGAERTAVI ARSPLAGFYEKAVDRESAYETLKAKTEAAAPAPEEGKSEVASQVGTVLGAFAKSAAHAIGSQVGRQIIRGGLGSLFGGGR R
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=503, Percent_Identity=62.0278330019881, Blast_Score=580, Evalue=1e-167,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 51375; Mature: 51243
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTALDALLIAKGEKEVCLLPRMANRHGLVAGATGTGKTVTLRVLAERFSAIGVPVFMAD CCCHHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE VKGDLSGLALPGDENPKVAERVAKMGLEGFACSGFPVVFWDVFGEQGHPVRTTVSEMGPL CCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHH LLSRLLNLNDVQSGVLNVIFKVADDNGLLLLDFKDLQAMVRYVGDNAAEFQTAYGNISAA HHHHHHCHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHCCCHHHHHHHCCCCCHH SIGAIQRNLLALGEQGAEQFFGEPALNLQDFMQTDSDGRGVINILAADKLMQSPKLYATF HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHHCCHHHHHH LLWMLSELFEQLPEAGDPEKPNLVFFFDEAHLLFDDAPKALVEKIEQVVRLIRSKGVGIY HHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEE FVTQNPVDLPDTVLGQLGNRVQHALRAFTPKDQKGVRAAAETFRANPAFSVETVITQLEV EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH GEALVSVLDGKGAPTVVERALVCPPQSRFAPLAGAERTAVIARSPLAGFYEKAVDRESAY HHHHHHHHCCCCCHHHHHHHHCCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH ETLKAKTEAAAPAPEEGKSEVASQVGTVLGAFAKSAAHAIGSQVGRQIIRGGLGSLFGGG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC RR CC >Mature Secondary Structure GTALDALLIAKGEKEVCLLPRMANRHGLVAGATGTGKTVTLRVLAERFSAIGVPVFMAD CCHHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE VKGDLSGLALPGDENPKVAERVAKMGLEGFACSGFPVVFWDVFGEQGHPVRTTVSEMGPL CCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHH LLSRLLNLNDVQSGVLNVIFKVADDNGLLLLDFKDLQAMVRYVGDNAAEFQTAYGNISAA HHHHHHCHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHCCCHHHHHHHCCCCCHH SIGAIQRNLLALGEQGAEQFFGEPALNLQDFMQTDSDGRGVINILAADKLMQSPKLYATF HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHHCCHHHHHH LLWMLSELFEQLPEAGDPEKPNLVFFFDEAHLLFDDAPKALVEKIEQVVRLIRSKGVGIY HHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEE FVTQNPVDLPDTVLGQLGNRVQHALRAFTPKDQKGVRAAAETFRANPAFSVETVITQLEV EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH GEALVSVLDGKGAPTVVERALVCPPQSRFAPLAGAERTAVIARSPLAGFYEKAVDRESAY HHHHHHHHCCCCCHHHHHHHHCCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH ETLKAKTEAAAPAPEEGKSEVASQVGTVLGAFAKSAAHAIGSQVGRQIIRGGLGSLFGGG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC RR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]