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The map label for this gene is ydjI [H]

Identifier: 78221974

GI number: 78221974

Start: 828358

End: 829419

Strand: Direct

Name: ydjI [H]

Synonym: Gmet_0754

Alternate gene names: 78221974

Gene position: 828358-829419 (Clockwise)

Preceding gene: 78221973

Following gene: 78221975

Centisome position: 20.72

GC content: 67.61

Gene sequence:

>1062_bases
GTGGCGATCAATGACATGAACGCGGTCTTTCTCGAAGTTATCGAGTGGTTCGACGACAGCGGCCGGGAGATGGTCCGCCG
CATACCTCCCCAGGGGTCGGCGGAGATCAAATTCGGCTCCCAGTTGGTGGTGCGGGAGAGCCAGCGGGCGGTCTTCTTCA
AGGACGGCAAGGTCGCCGACTGCTTCGGCCCGGGGCGTCATACCCTCACGAGCGCCAACCTCCCGATCCTGACCAAGCTC
CTGGCGCTCCCCTGGGGGTTCACCTCACCCTTCCGCTGCGAAGTCTGCTTCGTGGGGATGCACACCTTTACCGATCTCCG
CTGGGGGACCAAGGAGCCGGTCCCCTTCCGTGACAGCCGCTTCGGCATGGTACGTCTGCGGGCCTTCGGCTCCTACACCC
TGCGGGTTGTGGAGCCCCAGCTCCTGGTGAACGCCCTGGTGGGGACCCGGGGGCTCTACACGGCCGCCGAGCTGGAGGAG
TTCTTCCGGGACATCATCGTGGCGCGGCTGAACGACTACCTGGGTGAGACCATCGACACGGTCCTTGACCTCCCGGCCCG
GTACGACGAGATGGCTTCAGCCCTCAAGGAGCGTCTTGCCGGGGATTTCGGCGGTTTTGGCATCGAGATGGCCGAACTCT
ACGTGAATGCGATTACGCCGCCGCCGGAGGTCCAGAAGGTCATTGACGAGCGCAGCTCCATGGAGGCGGCCGGGGACGTG
GACCGCTATCTGAAGTTCAAGGCGGCCCAGAGCCTGGAGAAGGCGGCCTCGGCGGAAGGGGGCGGCGAGGCGGCCCAAGG
GATGGGGCTCGGCCTTGGGGCCGGTCTCGGCATGATCCTCCCCGGCATGGTGGCCAACGCCATGGGGGGAGGGGGGGCGA
AACCGGCACCGGCTCCTGCGGGAGGGGGGTGTCCCCGTTGTGCAACGCCGCTTGTGGCTGGGGCCAGGTTCTGCCACCAG
TGCGGCGCTGCCGCGGAACCCGGCTTTTGCGCCGGCTGCGGCAAGGAGCTGCCGGGGGATGCCCGGTTCTGCCCCGGGTG
CGGACGGCCCGCCGGAGGATAG

Upstream 100 bases:

>100_bases
GTGAGCATCTTCTGTTAAAATCCCTCAAGTTTTGTCACTGTTGCCCGATACGTGCTACAAGCTGCAACAACGTGAAACGG
CTGTTTGAACGGAGGTCCCC

Downstream 100 bases:

>100_bases
CCGGTGACCGTGTCCTGCCCCCAATGCGGCGCCTCGGTCGAGGCCCGCACCGAGACCCGCTTCCACCACTGCCCCTTCTG
CACCTCCTCCTTTGTGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MAINDMNAVFLEVIEWFDDSGREMVRRIPPQGSAEIKFGSQLVVRESQRAVFFKDGKVADCFGPGRHTLTSANLPILTKL
LALPWGFTSPFRCEVCFVGMHTFTDLRWGTKEPVPFRDSRFGMVRLRAFGSYTLRVVEPQLLVNALVGTRGLYTAAELEE
FFRDIIVARLNDYLGETIDTVLDLPARYDEMASALKERLAGDFGGFGIEMAELYVNAITPPPEVQKVIDERSSMEAAGDV
DRYLKFKAAQSLEKAASAEGGGEAAQGMGLGLGAGLGMILPGMVANAMGGGGAKPAPAPAGGGCPRCATPLVAGARFCHQ
CGAAAEPGFCAGCGKELPGDARFCPGCGRPAGG

Sequences:

>Translated_353_residues
MAINDMNAVFLEVIEWFDDSGREMVRRIPPQGSAEIKFGSQLVVRESQRAVFFKDGKVADCFGPGRHTLTSANLPILTKL
LALPWGFTSPFRCEVCFVGMHTFTDLRWGTKEPVPFRDSRFGMVRLRAFGSYTLRVVEPQLLVNALVGTRGLYTAAELEE
FFRDIIVARLNDYLGETIDTVLDLPARYDEMASALKERLAGDFGGFGIEMAELYVNAITPPPEVQKVIDERSSMEAAGDV
DRYLKFKAAQSLEKAASAEGGGEAAQGMGLGLGAGLGMILPGMVANAMGGGGAKPAPAPAGGGCPRCATPLVAGARFCHQ
CGAAAEPGFCAGCGKELPGDARFCPGCGRPAGG
>Mature_352_residues
AINDMNAVFLEVIEWFDDSGREMVRRIPPQGSAEIKFGSQLVVRESQRAVFFKDGKVADCFGPGRHTLTSANLPILTKLL
ALPWGFTSPFRCEVCFVGMHTFTDLRWGTKEPVPFRDSRFGMVRLRAFGSYTLRVVEPQLLVNALVGTRGLYTAAELEEF
FRDIIVARLNDYLGETIDTVLDLPARYDEMASALKERLAGDFGGFGIEMAELYVNAITPPPEVQKVIDERSSMEAAGDVD
RYLKFKAAQSLEKAASAEGGGEAAQGMGLGLGAGLGMILPGMVANAMGGGGAKPAPAPAGGGCPRCATPLVAGARFCHQC
GAAAEPGFCAGCGKELPGDARFCPGCGRPAGG

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 37541; Mature: 37409

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINDMNAVFLEVIEWFDDSGREMVRRIPPQGSAEIKFGSQLVVRESQRAVFFKDGKVAD
CCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCEEEEECCCCEEEEECCCEEE
CFGPGRHTLTSANLPILTKLLALPWGFTSPFRCEVCFVGMHTFTDLRWGTKEPVPFRDSR
CCCCCCCCEECCCCHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCCCCCCC
FGMVRLRAFGSYTLRVVEPQLLVNALVGTRGLYTAAELEEFFRDIIVARLNDYLGETIDT
CCEEEEEECCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLDLPARYDEMASALKERLAGDFGGFGIEMAELYVNAITPPPEVQKVIDERSSMEAAGDV
HHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCH
DRYLKFKAAQSLEKAASAEGGGEAAQGMGLGLGAGLGMILPGMVANAMGGGGAKPAPAPA
HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCC
GGGCPRCATPLVAGARFCHQCGAAAEPGFCAGCGKELPGDARFCPGCGRPAGG
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AINDMNAVFLEVIEWFDDSGREMVRRIPPQGSAEIKFGSQLVVRESQRAVFFKDGKVAD
CCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCEEEEECCCCEEEEECCCEEE
CFGPGRHTLTSANLPILTKLLALPWGFTSPFRCEVCFVGMHTFTDLRWGTKEPVPFRDSR
CCCCCCCCEECCCCHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCCCCCCC
FGMVRLRAFGSYTLRVVEPQLLVNALVGTRGLYTAAELEEFFRDIIVARLNDYLGETIDT
CCEEEEEECCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLDLPARYDEMASALKERLAGDFGGFGIEMAELYVNAITPPPEVQKVIDERSSMEAAGDV
HHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCH
DRYLKFKAAQSLEKAASAEGGGEAAQGMGLGLGAGLGMILPGMVANAMGGGGAKPAPAPA
HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCC
GGGCPRCATPLVAGARFCHQCGAAAEPGFCAGCGKELPGDARFCPGCGRPAGG
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]