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The map label for this gene is bphB [H]

Identifier: 78221951

GI number: 78221951

Start: 803398

End: 805008

Strand: Direct

Name: bphB [H]

Synonym: Gmet_0731

Alternate gene names: 78221951

Gene position: 803398-805008 (Clockwise)

Preceding gene: 78221950

Following gene: 78221953

Centisome position: 20.1

GC content: 61.27

Gene sequence:

>1611_bases
ATGGGGGAAGAGTCAGGCGTGATTGTCGAGCTGCAGCGGGAGATTGAAGCGTTACGCGAGCGCATCCGGGACTTCGAGGC
GCGGGAAGCCGAATGCATCCTGGTACATCAGGAACTGTTCCGTGCCCGCCGCGAGTGGGAGAGTATCTTTCAGGGGATTG
CCCATCCGACGGTGATCCTCGATTCCCGGCACGTGGTCGTTGCCGCCAACCGGGCCGTGGTGAAGGCCGCAGGGACAAGC
GAAGGGGAAATTATCGGCAGGAAATGTTACGAGGTTTTCCACAATTCGGGATGCACCGAGCCGCCACGGGTGTGCCCCAT
GGAGATGATGCTCCTGTCGAACGGTGAGGAGACAATCGAGGTGGAGGCCGAGGCCTTCGGCGGTGTCTTTCTCGTGTCGT
GCACCCCTGTCTTCGACGATGGGGGAAAGGTGGACAAGATCATCCATATCGCCACCGACATCACCGCGCGCAAAAGGGCT
GAGGAGTCCTTGCGGGAGAGCGAGGAACGGTACCGGATCGTGGCCGACTATTCCTCCGACTGGGATTTCTGGCTCTCGCC
CGAGGGTACCCTTTCATACGTTTCGCCTGCCTGCTTGGATATTACCGGCTATGCCCCTGCTGAGTTCTACGCTGACCCCT
CCCTGAACGCGGCAATCGTTCATCCCGACGACCGGGAGATGATAGCGCGGCACAACGAGGAGGCAATGTCCTCCAACGAA
AAGAGTGCAATGGAGCTGCGCATCATCACCAAGGGGGGCGAAACCCGCTGGATATTCCATGTGTGCCAGACCGTTTACGA
CAGTGAGGGGAAAAGCCGGGGCCGCCGCGCCAGCAACCGCGATATCACGGCTCTCAAGCGGGTTGAGGAGGAAAACCGGA
GGCTCCATGCCGAACTCGAACTCCGGGTCATGGAACGGACCGCCCAACTCGAAGCGGCCAACCGTGAACTCGAATCCTTC
TGCTACTCGGTTTCCCACGACCTGCGTGCTCCGCTGCGCCATATCGAGGGGTTCTCCAGCATCCTCATTGAGGATTGCGC
CGAGGGGCTCGACGAAACGGGGAAGGGGTATCTGGATCGTGTCGTCCGCGCCACCAGGCGGATGGATGAGCTGGTGGACG
CCCTTCTCAGGCTTTCCCGTTACACCCGGGACTACATGACGTTCGAGCCGGTTGACCTGAGCGACATGACCAGGGAGATC
ATGGGTGAGTTCACCAAGAGCAATCCTGAGCGGAAGGTAACGATCACCATTCAGGAGGGGCTCAGGGCCATGGGAGACGC
GCGTCTCCTGCGGGTGGTGATGGAGAACCTTCTCGGCAACGCCTGGAAGTTCACGGGAAAGATCGAGGAGGGGGAGATCG
AGTTCGGGAGGGAAGAGCGCGACGGGCGGGGCGTGTTATTCGTTCGGGACAATGGCGCGGGCTTCGACATGGCTTACGTC
GACAAGCTGTTCAATGCCTTCCAGCGGCTCCATGGCAGCGATGAGTTCGAGGGGACCGGCATCGGCCTTGCCACGGTCCA
GCGGATCATTCATCGCCACGGCGGCGAGGTCTGGGCCCATGCGGCGCCGAACCGGGGCGCAACCTTCTCGTTCACGCTCC
CCCCGGCGTGA

Upstream 100 bases:

>100_bases
GGAAGGCATGGCCCTTCTTTTTTGCCGGGATTTTGTGTATCCTCCCTGGAGGCAAACACTTCAGGTGTTTCGCAGGATGG
GGTAGCGGCATGGAGGAGCA

Downstream 100 bases:

>100_bases
CGCCCCGGTCATGCCGGAAGCGAAAAGAGCGATGCCCCTTCAGGCACCGCTCTTTTTCGTGGAGTTTCCCTCCAACGCTA
TCCCCCCAGCCCCGTCTCCC

Product: PAS/PAC sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MGEESGVIVELQREIEALRERIRDFEAREAECILVHQELFRARREWESIFQGIAHPTVILDSRHVVVAANRAVVKAAGTS
EGEIIGRKCYEVFHNSGCTEPPRVCPMEMMLLSNGEETIEVEAEAFGGVFLVSCTPVFDDGGKVDKIIHIATDITARKRA
EESLRESEERYRIVADYSSDWDFWLSPEGTLSYVSPACLDITGYAPAEFYADPSLNAAIVHPDDREMIARHNEEAMSSNE
KSAMELRIITKGGETRWIFHVCQTVYDSEGKSRGRRASNRDITALKRVEEENRRLHAELELRVMERTAQLEAANRELESF
CYSVSHDLRAPLRHIEGFSSILIEDCAEGLDETGKGYLDRVVRATRRMDELVDALLRLSRYTRDYMTFEPVDLSDMTREI
MGEFTKSNPERKVTITIQEGLRAMGDARLLRVVMENLLGNAWKFTGKIEEGEIEFGREERDGRGVLFVRDNGAGFDMAYV
DKLFNAFQRLHGSDEFEGTGIGLATVQRIIHRHGGEVWAHAAPNRGATFSFTLPPA

Sequences:

>Translated_536_residues
MGEESGVIVELQREIEALRERIRDFEAREAECILVHQELFRARREWESIFQGIAHPTVILDSRHVVVAANRAVVKAAGTS
EGEIIGRKCYEVFHNSGCTEPPRVCPMEMMLLSNGEETIEVEAEAFGGVFLVSCTPVFDDGGKVDKIIHIATDITARKRA
EESLRESEERYRIVADYSSDWDFWLSPEGTLSYVSPACLDITGYAPAEFYADPSLNAAIVHPDDREMIARHNEEAMSSNE
KSAMELRIITKGGETRWIFHVCQTVYDSEGKSRGRRASNRDITALKRVEEENRRLHAELELRVMERTAQLEAANRELESF
CYSVSHDLRAPLRHIEGFSSILIEDCAEGLDETGKGYLDRVVRATRRMDELVDALLRLSRYTRDYMTFEPVDLSDMTREI
MGEFTKSNPERKVTITIQEGLRAMGDARLLRVVMENLLGNAWKFTGKIEEGEIEFGREERDGRGVLFVRDNGAGFDMAYV
DKLFNAFQRLHGSDEFEGTGIGLATVQRIIHRHGGEVWAHAAPNRGATFSFTLPPA
>Mature_535_residues
GEESGVIVELQREIEALRERIRDFEAREAECILVHQELFRARREWESIFQGIAHPTVILDSRHVVVAANRAVVKAAGTSE
GEIIGRKCYEVFHNSGCTEPPRVCPMEMMLLSNGEETIEVEAEAFGGVFLVSCTPVFDDGGKVDKIIHIATDITARKRAE
ESLRESEERYRIVADYSSDWDFWLSPEGTLSYVSPACLDITGYAPAEFYADPSLNAAIVHPDDREMIARHNEEAMSSNEK
SAMELRIITKGGETRWIFHVCQTVYDSEGKSRGRRASNRDITALKRVEEENRRLHAELELRVMERTAQLEAANRELESFC
YSVSHDLRAPLRHIEGFSSILIEDCAEGLDETGKGYLDRVVRATRRMDELVDALLRLSRYTRDYMTFEPVDLSDMTREIM
GEFTKSNPERKVTITIQEGLRAMGDARLLRVVMENLLGNAWKFTGKIEEGEIEFGREERDGRGVLFVRDNGAGFDMAYVD
KLFNAFQRLHGSDEFEGTGIGLATVQRIIHRHGGEVWAHAAPNRGATFSFTLPPA

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=410, Percent_Identity=23.4146341463415, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789149, Length=246, Percent_Identity=28.8617886178862, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788549, Length=381, Percent_Identity=25.4593175853018, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87081816, Length=257, Percent_Identity=31.5175097276265, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1786600, Length=256, Percent_Identity=31.25, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI145693157, Length=257, Percent_Identity=28.7937743190661, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1790861, Length=230, Percent_Identity=29.5652173913043, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786912, Length=245, Percent_Identity=30.2040816326531, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=27.8481012658228, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788393, Length=233, Percent_Identity=25.7510729613734, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1790346, Length=269, Percent_Identity=26.0223048327138, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1790551, Length=209, Percent_Identity=28.2296650717703, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 60650; Mature: 60519

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEESGVIVELQREIEALRERIRDFEAREAECILVHQELFRARREWESIFQGIAHPTVIL
CCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEE
DSRHVVVAANRAVVKAAGTSEGEIIGRKCYEVFHNSGCTEPPRVCPMEMMLLSNGEETIE
ECCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEE
VEAEAFGGVFLVSCTPVFDDGGKVDKIIHIATDITARKRAEESLRESEERYRIVADYSSD
EEEHHCCCEEEEEEEEEECCCCCEEHEEEEHHCHHHHHHHHHHHHHHHHHEEEEEECCCC
WDFWLSPEGTLSYVSPACLDITGYAPAEFYADPSLNAAIVHPDDREMIARHNEEAMSSNE
CCEEECCCCCCHHCCCHHEEECCCCCHHHCCCCCCCEEEECCCCHHHHHHCCHHHHCCCC
KSAMELRIITKGGETRWIFHVCQTVYDSEGKSRGRRASNRDITALKRVEEENRRLHAELE
CCEEEEEEEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHEEHHHH
LRVMERTAQLEAANRELESFCYSVSHDLRAPLRHIEGFSSILIEDCAEGLDETGKGYLDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VVRATRRMDELVDALLRLSRYTRDYMTFEPVDLSDMTREIMGEFTKSNPERKVTITIQEG
HHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHH
LRAMGDARLLRVVMENLLGNAWKFTGKIEEGEIEFGREERDGRGVLFVRDNGAGFDMAYV
HHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHH
DKLFNAFQRLHGSDEFEGTGIGLATVQRIIHRHGGEVWAHAAPNRGATFSFTLPPA
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCC
>Mature Secondary Structure 
GEESGVIVELQREIEALRERIRDFEAREAECILVHQELFRARREWESIFQGIAHPTVIL
CCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEE
DSRHVVVAANRAVVKAAGTSEGEIIGRKCYEVFHNSGCTEPPRVCPMEMMLLSNGEETIE
ECCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEE
VEAEAFGGVFLVSCTPVFDDGGKVDKIIHIATDITARKRAEESLRESEERYRIVADYSSD
EEEHHCCCEEEEEEEEEECCCCCEEHEEEEHHCHHHHHHHHHHHHHHHHHEEEEEECCCC
WDFWLSPEGTLSYVSPACLDITGYAPAEFYADPSLNAAIVHPDDREMIARHNEEAMSSNE
CCEEECCCCCCHHCCCHHEEECCCCCHHHCCCCCCCEEEECCCCHHHHHHCCHHHHCCCC
KSAMELRIITKGGETRWIFHVCQTVYDSEGKSRGRRASNRDITALKRVEEENRRLHAELE
CCEEEEEEEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHEEHHHH
LRVMERTAQLEAANRELESFCYSVSHDLRAPLRHIEGFSSILIEDCAEGLDETGKGYLDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VVRATRRMDELVDALLRLSRYTRDYMTFEPVDLSDMTREIMGEFTKSNPERKVTITIQEG
HHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHH
LRAMGDARLLRVVMENLLGNAWKFTGKIEEGEIEFGREERDGRGVLFVRDNGAGFDMAYV
HHHHHHHHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHH
DKLFNAFQRLHGSDEFEGTGIGLATVQRIIHRHGGEVWAHAAPNRGATFSFTLPPA
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]