| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221930
Identifier: 78221930
GI number: 78221930
Start: 780508
End: 781392
Strand: Reverse
Name: 78221930
Synonym: Gmet_0710
Alternate gene names: NA
Gene position: 781392-780508 (Counterclockwise)
Preceding gene: 78221931
Following gene: 78221929
Centisome position: 19.55
GC content: 63.05
Gene sequence:
>885_bases ATGTCAAAGCTTACCGTCGGCCTCGTGCAGCAGAGCTGCACCAGCGATAAAGACCTGAATCTGGCTAAAAGCATCGAGAA CATCCGCAAGGCTAGCGCCCTGGGCGCTAAACTCGTGGTGCTGCAGGAGCTCCACTGCGGCCCCTACTTCTGCCAGAACG AGGACACCGGCCACTTCGACCTGGCCGAGGAGATCCCTGGCCCCACCACCGAACTACTGGGGGGCGTTGCCAGGGAGTTC GGCGTGGTGCTTGTCTCTTCCCTCTTCGAGAAACGGGCGTCGGGGATTTACCACAACACCGCCGTGGTCTTCGAGAAAGA CGGCTCCATCGCCGGGAAATACCGTAAGATGCACATCCCCGACGATCCCGGCTACTACGAGAAGTTCTACTTCACTCCCG GCGACCTGGGTTTTGAGCCCATACGCACCTCGGTGGGAAAACTCGGCGTCCTCGTCTGCTGGGACCAGTGGTATCCCGAA GCGGCCCGCCTCATGGCCCTTGCCGGAGCCGACCTCCTCATCTACCCCACGGCCATCGGCTGGGACCCGAGGGACGAGGA CGAGGAGAAGGTACGCCAGAAAGAGGCCTGGATTACCATCCAGAGGGGGCACGCCGTGGCCAACGGCATACCGGTGGTGA GCGTGAACCGTGTGGGGCTCGAACCCGACCCTTCCGGCGTGCTGCCGGGGAGCCTCTTCTGGGGTTCCAGCTTCGTGGCC GGCCCCCAGGGTGAAATCCTCACCCAGGCCTCCAACGACCGGGAGGAACTCCTCTCTGTCGAGCTTGATCTTGACCGCAG CGAGGCGGTGCGCCGCATCTGGCCGTTCCTGCGGGACCGGCGAATCGACGCCTATCAAGATCTGCTGAAGCGGTACCGGG ACTGA
Upstream 100 bases:
>100_bases CCCTCATCCTGCAACATGGCTCGCTCCACTGCGTGACCATGCAGCTGCCGAAGGGGACCCTTGCACCGGAACCACGAAAC GTCACCAGAGAGGTATGAAA
Downstream 100 bases:
>100_bases CCGCCATGGCACTTCAGGACAAGGAACTACTCGAAGCCCTCGCCAGCACCAAGATTCTCACCTCCATGATCACGCCGGCG GTACTCATCTCCGCCGCCGG
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSKLTVGLVQQSCTSDKDLNLAKSIENIRKASALGAKLVVLQELHCGPYFCQNEDTGHFDLAEEIPGPTTELLGGVAREF GVVLVSSLFEKRASGIYHNTAVVFEKDGSIAGKYRKMHIPDDPGYYEKFYFTPGDLGFEPIRTSVGKLGVLVCWDQWYPE AARLMALAGADLLIYPTAIGWDPRDEDEEKVRQKEAWITIQRGHAVANGIPVVSVNRVGLEPDPSGVLPGSLFWGSSFVA GPQGEILTQASNDREELLSVELDLDRSEAVRRIWPFLRDRRIDAYQDLLKRYRD
Sequences:
>Translated_294_residues MSKLTVGLVQQSCTSDKDLNLAKSIENIRKASALGAKLVVLQELHCGPYFCQNEDTGHFDLAEEIPGPTTELLGGVAREF GVVLVSSLFEKRASGIYHNTAVVFEKDGSIAGKYRKMHIPDDPGYYEKFYFTPGDLGFEPIRTSVGKLGVLVCWDQWYPE AARLMALAGADLLIYPTAIGWDPRDEDEEKVRQKEAWITIQRGHAVANGIPVVSVNRVGLEPDPSGVLPGSLFWGSSFVA GPQGEILTQASNDREELLSVELDLDRSEAVRRIWPFLRDRRIDAYQDLLKRYRD >Mature_293_residues SKLTVGLVQQSCTSDKDLNLAKSIENIRKASALGAKLVVLQELHCGPYFCQNEDTGHFDLAEEIPGPTTELLGGVAREFG VVLVSSLFEKRASGIYHNTAVVFEKDGSIAGKYRKMHIPDDPGYYEKFYFTPGDLGFEPIRTSVGKLGVLVCWDQWYPEA ARLMALAGADLLIYPTAIGWDPRDEDEEKVRQKEAWITIQRGHAVANGIPVVSVNRVGLEPDPSGVLPGSLFWGSSFVAG PQGEILTQASNDREELLSVELDLDRSEAVRRIWPFLRDRRIDAYQDLLKRYRD
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=297, Percent_Identity=29.2929292929293, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI7706509, Length=302, Percent_Identity=28.1456953642384, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI297632350, Length=293, Percent_Identity=27.6450511945392, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI297632348, Length=293, Percent_Identity=27.6450511945392, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI5031947, Length=293, Percent_Identity=27.6450511945392, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI297632346, Length=195, Percent_Identity=30.7692307692308, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17533173, Length=272, Percent_Identity=30.5147058823529, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17556280, Length=288, Percent_Identity=25.3472222222222, Blast_Score=84, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6323383, Length=303, Percent_Identity=31.3531353135314, Blast_Score=117, Evalue=2e-27, Organism=Drosophila melanogaster, GI21358471, Length=280, Percent_Identity=32.8571428571429, Blast_Score=134, Evalue=8e-32, Organism=Drosophila melanogaster, GI17933642, Length=286, Percent_Identity=26.2237762237762, Blast_Score=95, Evalue=7e-20, Organism=Drosophila melanogaster, GI21355835, Length=291, Percent_Identity=26.8041237113402, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 32743; Mature: 32612
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLTVGLVQQSCTSDKDLNLAKSIENIRKASALGAKLVVLQELHCGPYFCQNEDTGHFD CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHEEEHHHHCCCCEEECCCCCCCCC LAEEIPGPTTELLGGVAREFGVVLVSSLFEKRASGIYHNTAVVFEKDGSIAGKYRKMHIP CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEEEECCCCCCCCEEEEECC DDPGYYEKFYFTPGDLGFEPIRTSVGKLGVLVCWDQWYPEAARLMALAGADLLIYPTAIG CCCCCCEEEEECCCCCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCEEEEEEECC WDPRDEDEEKVRQKEAWITIQRGHAVANGIPVVSVNRVGLEPDPSGVLPGSLFWGSSFVA CCCCCCHHHHHHHHHHEEEEECCCCHHCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCC GPQGEILTQASNDREELLSVELDLDRSEAVRRIWPFLRDRRIDAYQDLLKRYRD CCCCCEEECCCCCHHHHEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure SKLTVGLVQQSCTSDKDLNLAKSIENIRKASALGAKLVVLQELHCGPYFCQNEDTGHFD CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHEEEHHHHCCCCEEECCCCCCCCC LAEEIPGPTTELLGGVAREFGVVLVSSLFEKRASGIYHNTAVVFEKDGSIAGKYRKMHIP CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEEEECCCCCCCCEEEEECC DDPGYYEKFYFTPGDLGFEPIRTSVGKLGVLVCWDQWYPEAARLMALAGADLLIYPTAIG CCCCCCEEEEECCCCCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCEEEEEEECC WDPRDEDEEKVRQKEAWITIQRGHAVANGIPVVSVNRVGLEPDPSGVLPGSLFWGSSFVA CCCCCCHHHHHHHHHHEEEEECCCCHHCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCC GPQGEILTQASNDREELLSVELDLDRSEAVRRIWPFLRDRRIDAYQDLLKRYRD CCCCCEEECCCCCHHHHEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]