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The map label for this gene is fixA [H]

Identifier: 78221903

GI number: 78221903

Start: 749552

End: 750370

Strand: Direct

Name: fixA [H]

Synonym: Gmet_0683

Alternate gene names: 78221903

Gene position: 749552-750370 (Clockwise)

Preceding gene: 78221902

Following gene: 78221904

Centisome position: 18.75

GC content: 65.2

Gene sequence:

>819_bases
ATGCTCGCCATTGCCTGTATCAAACAGGTGCCGGACACTACCCAGGTAAAGATTGATCCAGTCACCAACACCCTCGTCCG
CGAGGGGATCCCGTTCATCGTCAACCCGTACGACACCCATGCCCTGGAGGAGAGCCTCCGGATCAAGGACCGCTTCGGCT
TCCGGGCCGTGGCCCTCTCCATGGGTCCACCCAACGCCGAGGCCGCTCTTCGCAAGGCCCTCTCCATGGGGGCCGATGAT
GCCATTCTCTGCTCCGACCGCTGCTTCGGCGGCGCCGATACCCTCTCCACGAGCAATGTACTCGCCGCTGCCATCAAGCG
GATCGCCCAGGAGACCGGGGAAGAGGTGGGGATCGTCTTCTGCGGCAAACAGACTATCGACGGCGACACCGCCCAGGTGG
GCCCCGGCATTGCCGTGCGCCTCGGCTTTACCCCGCTGACCCTCGTGGACCGCATCGAGGCACTGGACCCGGTCAACCGA
CGGATCAAGGTCCGGCGCAAGCTGGAAGGACGCTACGAGGTCGTTGAAGCCTCCCTGCCGGTCATGATAACCGCCGTGCG
GGAGCTGAACCGCCCCCGCTACCCCTCCGTTCCCATGCGCCTTGCTGCCGCCGATGCCCAGGTAACGGTCTGGACCAACG
AGGTGCTGCGGATGGACGTGAACAGCGTTGGCCTCAAGGGGTCACCCACCTGGGTGAGCCGAATCTTCTCCCCCGAGCGG
GACAAGGGGGAGATCATCGGCGACGGCATGGCCGATCCGACGGGAACGGCCCGCCTGCTCATCGACCAGCTGCTGGCGAA
GGATCTGCTGGCGGTGTGA

Upstream 100 bases:

>100_bases
TTTGATTTTTTGATATTATTATCTGCTGCTGAAGATGGAGGCAATGACCCGTTGACTCCGTCTCTAACTTTTGAGCCCTT
CACCGGGCGGGAGGATTTTC

Downstream 100 bases:

>100_bases
TGATGTTCGATCGCTGACGCTCGTTGATGTGCTTCGCACGTTCGTGCGGCGAGCGCCGCGTTCGAAACGTTCGAGACGAA
GTAAACGAACGAGCGAAGTG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MLAIACIKQVPDTTQVKIDPVTNTLVREGIPFIVNPYDTHALEESLRIKDRFGFRAVALSMGPPNAEAALRKALSMGADD
AILCSDRCFGGADTLSTSNVLAAAIKRIAQETGEEVGIVFCGKQTIDGDTAQVGPGIAVRLGFTPLTLVDRIEALDPVNR
RIKVRRKLEGRYEVVEASLPVMITAVRELNRPRYPSVPMRLAAADAQVTVWTNEVLRMDVNSVGLKGSPTWVSRIFSPER
DKGEIIGDGMADPTGTARLLIDQLLAKDLLAV

Sequences:

>Translated_272_residues
MLAIACIKQVPDTTQVKIDPVTNTLVREGIPFIVNPYDTHALEESLRIKDRFGFRAVALSMGPPNAEAALRKALSMGADD
AILCSDRCFGGADTLSTSNVLAAAIKRIAQETGEEVGIVFCGKQTIDGDTAQVGPGIAVRLGFTPLTLVDRIEALDPVNR
RIKVRRKLEGRYEVVEASLPVMITAVRELNRPRYPSVPMRLAAADAQVTVWTNEVLRMDVNSVGLKGSPTWVSRIFSPER
DKGEIIGDGMADPTGTARLLIDQLLAKDLLAV
>Mature_272_residues
MLAIACIKQVPDTTQVKIDPVTNTLVREGIPFIVNPYDTHALEESLRIKDRFGFRAVALSMGPPNAEAALRKALSMGADD
AILCSDRCFGGADTLSTSNVLAAAIKRIAQETGEEVGIVFCGKQTIDGDTAQVGPGIAVRLGFTPLTLVDRIEALDPVNR
RIKVRRKLEGRYEVVEASLPVMITAVRELNRPRYPSVPMRLAAADAQVTVWTNEVLRMDVNSVGLKGSPTWVSRIFSPER
DKGEIIGDGMADPTGTARLLIDQLLAKDLLAV

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI62420877, Length=209, Percent_Identity=30.622009569378, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4503609, Length=221, Percent_Identity=29.8642533936652, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI25141345, Length=202, Percent_Identity=30.1980198019802, Blast_Score=95, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6321646, Length=180, Percent_Identity=35, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24651147, Length=196, Percent_Identity=28.0612244897959, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24651145, Length=196, Percent_Identity=28.0612244897959, Blast_Score=81, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29448; Mature: 29448

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIACIKQVPDTTQVKIDPVTNTLVREGIPFIVNPYDTHALEESLRIKDRFGFRAVALS
CHHHHHHHHCCCCCEEEECCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCEEEEEEE
MGPPNAEAALRKALSMGADDAILCSDRCFGGADTLSTSNVLAAAIKRIAQETGEEVGIVF
CCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
CGKQTIDGDTAQVGPGIAVRLGFTPLTLVDRIEALDPVNRRIKVRRKLEGRYEVVEASLP
ECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEHHCCCC
VMITAVRELNRPRYPSVPMRLAAADAQVTVWTNEVLRMDVNSVGLKGSPTWVSRIFSPER
HHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECHHHEECHHHCCCCCCHHHHHHHCCCCC
DKGEIIGDGMADPTGTARLLIDQLLAKDLLAV
CCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAIACIKQVPDTTQVKIDPVTNTLVREGIPFIVNPYDTHALEESLRIKDRFGFRAVALS
CHHHHHHHHCCCCCEEEECCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCEEEEEEE
MGPPNAEAALRKALSMGADDAILCSDRCFGGADTLSTSNVLAAAIKRIAQETGEEVGIVF
CCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
CGKQTIDGDTAQVGPGIAVRLGFTPLTLVDRIEALDPVNRRIKVRRKLEGRYEVVEASLP
ECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEHHCCCC
VMITAVRELNRPRYPSVPMRLAAADAQVTVWTNEVLRMDVNSVGLKGSPTWVSRIFSPER
HHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECHHHEECHHHCCCCCCHHHHHHHCCCCC
DKGEIIGDGMADPTGTARLLIDQLLAKDLLAV
CCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA