Click here to switch to the map view.

The map label for this gene is fdxB [H]

Identifier: 78221892

GI number: 78221892

Start: 738346

End: 738609

Strand: Direct

Name: fdxB [H]

Synonym: Gmet_0672

Alternate gene names: 78221892

Gene position: 738346-738609 (Clockwise)

Preceding gene: 78221891

Following gene: 78221893

Centisome position: 18.47

GC content: 58.33

Gene sequence:

>264_bases
ATGGCCTACATCACCGGATTGAGAAGAAACAAGAGCGAGTACACCCCCCAGTTCGTCGTTTCCGTCGACGAGGAGACCTG
CATCGGCTGCGCCCGCTGTTTCAAGGTCTGCGCCCACGACGTGCTCACCTTCGAGGAGGTGGACGAGGACGATTCGGCCA
AGATGTTCATGAAGGTCACGAATCCCGGCAACTGTATCGGCTGCCAGGCCTGCGGGCGGACCTGTTCGAAGAAGTGCTTC
AGCTTCGAGCCGGTAGTTATCTGA

Upstream 100 bases:

>100_bases
TCGTTCGAGGAATAACCGTAGGGGCGCTGCTTGCCGCGCCCTGTCATATCAATGGGCGCGGCAAGCAGCGCCCCTACACA
ACCATAATGGAGGAAGCACC

Downstream 100 bases:

>100_bases
TCGGAAAATGGAGGTTTCCCATGCTCATTGCCGTAGCATCCAAGGATGGAAGGGAGATCAATCAGCACTTCGGCCATGCG
GAGCGGTTCCTCATCTATGA

Product: 4Fe-4S ferredoxin, iron-sulfur binding protein

Products: NA

Alternate protein names: Ferredoxin III; FdIII [H]

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MAYITGLRRNKSEYTPQFVVSVDEETCIGCARCFKVCAHDVLTFEEVDEDDSAKMFMKVTNPGNCIGCQACGRTCSKKCF
SFEPVVI

Sequences:

>Translated_87_residues
MAYITGLRRNKSEYTPQFVVSVDEETCIGCARCFKVCAHDVLTFEEVDEDDSAKMFMKVTNPGNCIGCQACGRTCSKKCF
SFEPVVI
>Mature_86_residues
AYITGLRRNKSEYTPQFVVSVDEETCIGCARCFKVCAHDVLTFEEVDEDDSAKMFMKVTNPGNCIGCQACGRTCSKKCFS
FEPVVI

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014283
- InterPro:   IPR012285 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 9703; Mature: 9572

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
13.8 %Cys+Met (Translated Protein)
10.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
12.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYITGLRRNKSEYTPQFVVSVDEETCIGCARCFKVCAHDVLTFEEVDEDDSAKMFMKVT
CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NPGNCIGCQACGRTCSKKCFSFEPVVI
CCCCEEEHHHHCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AYITGLRRNKSEYTPQFVVSVDEETCIGCARCFKVCAHDVLTFEEVDEDDSAKMFMKVT
CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NPGNCIGCQACGRTCSKKCFSFEPVVI
CCCCEEEHHHHCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8709854 [H]