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The map label for this gene is ygiQ [C]

Identifier: 78221830

GI number: 78221830

Start: 679126

End: 680937

Strand: Direct

Name: ygiQ [C]

Synonym: Gmet_0609

Alternate gene names: 78221830

Gene position: 679126-680937 (Clockwise)

Preceding gene: 78221829

Following gene: 78221831

Centisome position: 16.99

GC content: 61.2

Gene sequence:

>1812_bases
ATGCCGTTTCTTCCAACCACAAGAGCCGAGGCGTTAAAACGGGGATGGCACGAACTTGACGTCGTTTTTGTTACCGGTGA
CGCCTATATCGACCACCCGGCCTTTGGTGTTCCGCTTCTGGCCCGATGGCTTGAATCCCACGGCTTCAGGGTCGGGATCA
TTCCCCAACCCGATTGGCGCTCCCGGGAGCCCTTCATGGCTCTTGGGCGTCCCCGTCTTTTCTTTGCCGTCTCTGCCGGC
GCCATGGATTCAATGGTTGCCCACTATACCCCCCTCAAGAAACTACGCCACGACGACGCCTATACCCCCGGCGGCCGCCA
TGGCGCCCGCCCCAATCGGGCCACCATTGTCTATACCTCCCGACTCAAGGAAGCATTCAAGGACGTACCGGTGGTTGTCG
GCGGCATTGAAGCATCGCTTCGTCGTTTCGCCCACTACGACTATTGGGAAGACAAGGTCCGTCGCTCCATTCTCTTTGAC
GCCAAGGCGGACCTCCTCGTATTCGGTATGGGGGAGCGACCTATCCTGGAGTTGGCCGAGCGGCTGAGCGGCGGAGAACC
CCTCGCGCAGCTTACCGACATTCCGGGGACGGCGTATGCGGCCCGGGGAGACGTGCCTTCCGGCGCGATAGTGCTTCCCG
CCTGCGAGGAGGTGATGGCTGATCCCCGTCGCTATGCCGAAGCTTTCAGGCTCGTCACGCATGAAATGAATCCCGGTAGC
GGCAAGGCCCTTGCTCAGCGCCACGGCGAGCGCCTGCTCGTTTGTAATCCCCCTTCCGTTCCACTCTCTGAAGCGGAGAT
AGATGCTGTCTATGCACTTCCGTTCGCCCGGACGCCCCATCCGTCATACAAAGAGCCAATACCAGCCTATGACCAGATCA
AGTCATCCATCACCACGCATCGCGGCTGCTTCGGCGGGTGCGCCTTCTGCGCCATAACCCACCACCAGGGGAAGTTTATC
CAGTCGCGAAGCGAGCACTCAGTTACGGAGGAAGTCGGGCGAATGGTGAAGATGCCTTGGTTTCGCGGGAGTGTCAGCGA
CGTGGGCGGGCCGACAGCCAACATGTATGGCCTGCGCTGTGGCAGTCCTGATGCAGGGAAGAACTGCCGCCGCGAAAGCT
GCCTCTTCCCATCGGTCTGTCGACATCTTGTCACCCACGACCGACGGGCGGCTACCCTCCTCAGGCGGGTGAGAGCGATT
CCGGGAGTGAGGCACGTGGCGGTGTCGTCGGGCATCCGCTACGACCTCCTGGAGCGACAACCGGGGTACTTTGGCGAGCT
GTTGGCCCACCATGTGGGCGGACTCCTCAAGGTCGCTCCGGAGCATACGGTGGATGTGGTCACCGATCTGATGCGTAAAC
CGGGGAAGGAGGCGTTCGAGCGCTTTCTTGCCCGCTTCAGGGACGAAAGCATGCGCCTGGGGCGAAAACAGTACGTGATT
CCCTACCTGATGTCGGGGCATCCAGGTTGTACTCTTGATCACATGGTGGAGCTGGCCCTGTTTCTCAAGCGCCACAACAT
GCGGGTGGACCAGGTGCAGGACTTCACACCTACCCCTGGAACCCTTGCCACCTGCATGTACCATACGGGTATCGATCCCT
TCTCCGGGCGGAACGTCTATGTGGCGCGAAGCGACCGGGAGAAACGGCTTCAGAAGGCGCTGCTTCTGTGGCATCAGCCC
GAAGAGCGGCGCAACGTTCTTGAAGCACTTCGGGCCTGTGGCCGCGAGAAGGAGGCTGCCGAACTCCTTGGGGGATTCCG
GCAGAGGGAAAAAAGCCGCAGCGCGCCGAGAGGTGGCAAGCGCCGCCCTTGA

Upstream 100 bases:

>100_bases
AGGTGCCGCCGGCCAAGCCGTGCAGAACATGAACATTATGTACGGCTTCCCTGAGACGATGGGGCTGGAAGGGCTCCCCC
TTTTTCCCTGACGGGTATCT

Downstream 100 bases:

>100_bases
CTCCGGACACGGATGCGATTTAATTAATTTAGTCCTATACAAGGGGCGTGCTGCCCCCATGGAGGAGGGCGCCATGCTTG
TCGTATGCTGTATCAAGCAA

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MPFLPTTRAEALKRGWHELDVVFVTGDAYIDHPAFGVPLLARWLESHGFRVGIIPQPDWRSREPFMALGRPRLFFAVSAG
AMDSMVAHYTPLKKLRHDDAYTPGGRHGARPNRATIVYTSRLKEAFKDVPVVVGGIEASLRRFAHYDYWEDKVRRSILFD
AKADLLVFGMGERPILELAERLSGGEPLAQLTDIPGTAYAARGDVPSGAIVLPACEEVMADPRRYAEAFRLVTHEMNPGS
GKALAQRHGERLLVCNPPSVPLSEAEIDAVYALPFARTPHPSYKEPIPAYDQIKSSITTHRGCFGGCAFCAITHHQGKFI
QSRSEHSVTEEVGRMVKMPWFRGSVSDVGGPTANMYGLRCGSPDAGKNCRRESCLFPSVCRHLVTHDRRAATLLRRVRAI
PGVRHVAVSSGIRYDLLERQPGYFGELLAHHVGGLLKVAPEHTVDVVTDLMRKPGKEAFERFLARFRDESMRLGRKQYVI
PYLMSGHPGCTLDHMVELALFLKRHNMRVDQVQDFTPTPGTLATCMYHTGIDPFSGRNVYVARSDREKRLQKALLLWHQP
EERRNVLEALRACGREKEAAELLGGFRQREKSRSAPRGGKRRP

Sequences:

>Translated_603_residues
MPFLPTTRAEALKRGWHELDVVFVTGDAYIDHPAFGVPLLARWLESHGFRVGIIPQPDWRSREPFMALGRPRLFFAVSAG
AMDSMVAHYTPLKKLRHDDAYTPGGRHGARPNRATIVYTSRLKEAFKDVPVVVGGIEASLRRFAHYDYWEDKVRRSILFD
AKADLLVFGMGERPILELAERLSGGEPLAQLTDIPGTAYAARGDVPSGAIVLPACEEVMADPRRYAEAFRLVTHEMNPGS
GKALAQRHGERLLVCNPPSVPLSEAEIDAVYALPFARTPHPSYKEPIPAYDQIKSSITTHRGCFGGCAFCAITHHQGKFI
QSRSEHSVTEEVGRMVKMPWFRGSVSDVGGPTANMYGLRCGSPDAGKNCRRESCLFPSVCRHLVTHDRRAATLLRRVRAI
PGVRHVAVSSGIRYDLLERQPGYFGELLAHHVGGLLKVAPEHTVDVVTDLMRKPGKEAFERFLARFRDESMRLGRKQYVI
PYLMSGHPGCTLDHMVELALFLKRHNMRVDQVQDFTPTPGTLATCMYHTGIDPFSGRNVYVARSDREKRLQKALLLWHQP
EERRNVLEALRACGREKEAAELLGGFRQREKSRSAPRGGKRRP
>Mature_602_residues
PFLPTTRAEALKRGWHELDVVFVTGDAYIDHPAFGVPLLARWLESHGFRVGIIPQPDWRSREPFMALGRPRLFFAVSAGA
MDSMVAHYTPLKKLRHDDAYTPGGRHGARPNRATIVYTSRLKEAFKDVPVVVGGIEASLRRFAHYDYWEDKVRRSILFDA
KADLLVFGMGERPILELAERLSGGEPLAQLTDIPGTAYAARGDVPSGAIVLPACEEVMADPRRYAEAFRLVTHEMNPGSG
KALAQRHGERLLVCNPPSVPLSEAEIDAVYALPFARTPHPSYKEPIPAYDQIKSSITTHRGCFGGCAFCAITHHQGKFIQ
SRSEHSVTEEVGRMVKMPWFRGSVSDVGGPTANMYGLRCGSPDAGKNCRRESCLFPSVCRHLVTHDRRAATLLRRVRAIP
GVRHVAVSSGIRYDLLERQPGYFGELLAHHVGGLLKVAPEHTVDVVTDLMRKPGKEAFERFLARFRDESMRLGRKQYVIP
YLMSGHPGCTLDHMVELALFLKRHNMRVDQVQDFTPTPGTLATCMYHTGIDPFSGRNVYVARSDREKRLQKALLLWHQPE
ERRNVLEALRACGREKEAAELLGGFRQREKSRSAPRGGKRRP

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=639, Percent_Identity=46.0093896713615, Blast_Score=576, Evalue=1e-165,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 67562; Mature: 67430

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLPTTRAEALKRGWHELDVVFVTGDAYIDHPAFGVPLLARWLESHGFRVGIIPQPDWR
CCCCCCCHHHHHHCCCCEEEEEEEECCCEECCCCCCHHHHHHHHHHCCCEEEECCCCCCC
SREPFMALGRPRLFFAVSAGAMDSMVAHYTPLKKLRHDDAYTPGGRHGARPNRATIVYTS
CCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHH
RLKEAFKDVPVVVGGIEASLRRFAHYDYWEDKVRRSILFDAKADLLVFGMGERPILELAE
HHHHHHHCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
RLSGGEPLAQLTDIPGTAYAARGDVPSGAIVLPACEEVMADPRRYAEAFRLVTHEMNPGS
HCCCCCCHHHHHCCCCCCEEECCCCCCCCEECCCHHHHHCCHHHHHHHHHHHHHCCCCCC
GKALAQRHGERLLVCNPPSVPLSEAEIDAVYALPFARTPHPSYKEPIPAYDQIKSSITTH
CHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
RGCFGGCAFCAITHHQGKFIQSRSEHSVTEEVGRMVKMPWFRGSVSDVGGPTANMYGLRC
CCCCCCHHEEEEECCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCEEEEEC
GSPDAGKNCRRESCLFPSVCRHLVTHDRRAATLLRRVRAIPGVRHVAVSSGIRYDLLERQ
CCCCCCCCCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCC
PGYFGELLAHHVGGLLKVAPEHTVDVVTDLMRKPGKEAFERFLARFRDESMRLGRKQYVI
CCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHEEE
PYLMSGHPGCTLDHMVELALFLKRHNMRVDQVQDFTPTPGTLATCMYHTGIDPFSGRNVY
HHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEE
VARSDREKRLQKALLLWHQPEERRNVLEALRACGREKEAAELLGGFRQREKSRSAPRGGK
EECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
RRP
CCC
>Mature Secondary Structure 
PFLPTTRAEALKRGWHELDVVFVTGDAYIDHPAFGVPLLARWLESHGFRVGIIPQPDWR
CCCCCCHHHHHHCCCCEEEEEEEECCCEECCCCCCHHHHHHHHHHCCCEEEECCCCCCC
SREPFMALGRPRLFFAVSAGAMDSMVAHYTPLKKLRHDDAYTPGGRHGARPNRATIVYTS
CCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHH
RLKEAFKDVPVVVGGIEASLRRFAHYDYWEDKVRRSILFDAKADLLVFGMGERPILELAE
HHHHHHHCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
RLSGGEPLAQLTDIPGTAYAARGDVPSGAIVLPACEEVMADPRRYAEAFRLVTHEMNPGS
HCCCCCCHHHHHCCCCCCEEECCCCCCCCEECCCHHHHHCCHHHHHHHHHHHHHCCCCCC
GKALAQRHGERLLVCNPPSVPLSEAEIDAVYALPFARTPHPSYKEPIPAYDQIKSSITTH
CHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
RGCFGGCAFCAITHHQGKFIQSRSEHSVTEEVGRMVKMPWFRGSVSDVGGPTANMYGLRC
CCCCCCHHEEEEECCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCEEEEEC
GSPDAGKNCRRESCLFPSVCRHLVTHDRRAATLLRRVRAIPGVRHVAVSSGIRYDLLERQ
CCCCCCCCCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCC
PGYFGELLAHHVGGLLKVAPEHTVDVVTDLMRKPGKEAFERFLARFRDESMRLGRKQYVI
CCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHEEE
PYLMSGHPGCTLDHMVELALFLKRHNMRVDQVQDFTPTPGTLATCMYHTGIDPFSGRNVY
HHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEE
VARSDREKRLQKALLLWHQPEERRNVLEALRACGREKEAAELLGGFRQREKSRSAPRGGK
EECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
RRP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA