| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221811
Identifier: 78221811
GI number: 78221811
Start: 656467
End: 657216
Strand: Direct
Name: 78221811
Synonym: Gmet_0590
Alternate gene names: NA
Gene position: 656467-657216 (Clockwise)
Preceding gene: 78221810
Following gene: 78221812
Centisome position: 16.42
GC content: 61.73
Gene sequence:
>750_bases GTGTTTTTCTGCTCGATACAGGCAGTTTTTGCCGCGGATGACACCGGAACCATCACCGGCAAATGGATCACCAAGGAGTA CGGCCCCATGACTGACGCGCAGGTGCTGCTGTTCAACGTGGCCAAGGGTCCTCCTCCGGCAGGCCACAAGTATCTGCGCA CCCCCGATATGGGAACCCCCGTCGACCAGGAGGGGGGATTCCGGGTGCAGGCCCCTGCCGGCAGGTACTACCTGGTCATG CTTAAACGGGTGGACCCCAACAGCGCCGGCCCTCCCCGGGAAGGGGATCCGCAGTATTACGCCCGGGACAAGAAGGGGAA ACCGAAGGAGTTCGTGGTGAAGGCCGGAAAAACCACGAATATCGGCACCATCACCGAGGCGGTCCCCTACCGGAAAGGGG TGGCCGCCGTCAAGGACGGCACGACCGGTATCGAAGGGACCGTAACCGACAAACAGGGGCAACCCGTGGCCGGTATCCGC GTCTTTGCCTACGAAGCCGCGGAAATGCAAGGGATGCCGCGTTATGCCTCCAACGAGACCGGTGCGGACGGGAAGTATGT GCTGGTCCTTACCGGGAAGGGGACCTATTTCCTCAAGGCCCGTACCCATTATGGCGGCGGGAAGCCGGCAGAGGGCGAAT TCCTGGGTGCTTACGGTTCCGGCCCCGTTGTCGTTGATGGCGGGCAACTCCGGCAGGGCATCGATATCCAGGTCACCAGA TTCAGTACGCAGCAACGCAAGCAGCAATGA
Upstream 100 bases:
>100_bases ACGTGATGGGTTGATAACGTCACGGAAGCGTACTGCCGTTTCACGCTAAAGATCGGGGGTGAGTTGCTTGAAGAACAAAA TGATCGGCTTTTTCCTGATG
Downstream 100 bases:
>100_bases ATTCCGCAATATCGCTTCTGTTGCTGTCTGTCCTCCTGCTCCTCCCGGCTCCCAGTCGGGCAACGCCGGTGGAGGGGGTG GTGGTTGCGGAGCAGGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MFFCSIQAVFAADDTGTITGKWITKEYGPMTDAQVLLFNVAKGPPPAGHKYLRTPDMGTPVDQEGGFRVQAPAGRYYLVM LKRVDPNSAGPPREGDPQYYARDKKGKPKEFVVKAGKTTNIGTITEAVPYRKGVAAVKDGTTGIEGTVTDKQGQPVAGIR VFAYEAAEMQGMPRYASNETGADGKYVLVLTGKGTYFLKARTHYGGGKPAEGEFLGAYGSGPVVVDGGQLRQGIDIQVTR FSTQQRKQQ
Sequences:
>Translated_249_residues MFFCSIQAVFAADDTGTITGKWITKEYGPMTDAQVLLFNVAKGPPPAGHKYLRTPDMGTPVDQEGGFRVQAPAGRYYLVM LKRVDPNSAGPPREGDPQYYARDKKGKPKEFVVKAGKTTNIGTITEAVPYRKGVAAVKDGTTGIEGTVTDKQGQPVAGIR VFAYEAAEMQGMPRYASNETGADGKYVLVLTGKGTYFLKARTHYGGGKPAEGEFLGAYGSGPVVVDGGQLRQGIDIQVTR FSTQQRKQQ >Mature_249_residues MFFCSIQAVFAADDTGTITGKWITKEYGPMTDAQVLLFNVAKGPPPAGHKYLRTPDMGTPVDQEGGFRVQAPAGRYYLVM LKRVDPNSAGPPREGDPQYYARDKKGKPKEFVVKAGKTTNIGTITEAVPYRKGVAAVKDGTTGIEGTVTDKQGQPVAGIR VFAYEAAEMQGMPRYASNETGADGKYVLVLTGKGTYFLKARTHYGGGKPAEGEFLGAYGSGPVVVDGGQLRQGIDIQVTR FSTQQRKQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26796; Mature: 26796
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFCSIQAVFAADDTGTITGKWITKEYGPMTDAQVLLFNVAKGPPPAGHKYLRTPDMGTP CEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCC VDQEGGFRVQAPAGRYYLVMLKRVDPNSAGPPREGDPQYYARDKKGKPKEFVVKAGKTTN CCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHEEEECCCCCC IGTITEAVPYRKGVAAVKDGTTGIEGTVTDKQGQPVAGIRVFAYEAAEMQGMPRYASNET CCCHHHCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCEEEEEEEHHHHCCCCCCCCCCC GADGKYVLVLTGKGTYFLKARTHYGGGKPAEGEFLGAYGSGPVVVDGGQLRQGIDIQVTR CCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEEEE FSTQQRKQQ CCCHHHHCC >Mature Secondary Structure MFFCSIQAVFAADDTGTITGKWITKEYGPMTDAQVLLFNVAKGPPPAGHKYLRTPDMGTP CEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCC VDQEGGFRVQAPAGRYYLVMLKRVDPNSAGPPREGDPQYYARDKKGKPKEFVVKAGKTTN CCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHEEEECCCCCC IGTITEAVPYRKGVAAVKDGTTGIEGTVTDKQGQPVAGIRVFAYEAAEMQGMPRYASNET CCCHHHCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCEEEEEEEHHHHCCCCCCCCCCC GADGKYVLVLTGKGTYFLKARTHYGGGKPAEGEFLGAYGSGPVVVDGGQLRQGIDIQVTR CCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEEEE FSTQQRKQQ CCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA