| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221791
Identifier: 78221791
GI number: 78221791
Start: 612458
End: 613519
Strand: Direct
Name: 78221791
Synonym: Gmet_0570
Alternate gene names: NA
Gene position: 612458-613519 (Clockwise)
Preceding gene: 78221790
Following gene: 78221792
Centisome position: 15.32
GC content: 68.93
Gene sequence:
>1062_bases ATGCTGCGGGACCGGCATTTCTGGATGGTGGTGGCGGCAGGGCTTCTCCTCGGGGGGCTCGGGGCGCTCCTGGCGGTCTG GGGGAACCCGGAGAACTCGGGAATCTGCGTCTCCTGCTTCATCGAAAACAGCGCCGGCGCCCTGGGGATGCACGATAACC CCCGCATGCAGTACCTGCGCCCCGAACTGATCGGCTTCGTCCTCGGCGCCATGGCCAGTGCCCTCCTCTTTCGCGAGTTC CGTTCCCGGGGCGGGAGCGCCCCACTGCCGCGGCTCTTCGCGGGGATCTTCCTCATGGTGGGGTGCGGTGTCTTCATCGG CTGCCCCATCAAACTGTTCCTCCGGCTGACCGCCGGGGACCTCACCGCCGTTGCCGGGGTCGCGGGGCTCGTGGCCGGGG TCTGGGCAGGGCTCCGGGGGCTTGCCAACGGGGTTGAACCGGGCCAGACGAGCCGGGGCCAGGGGCACGGTGGTCCGCTG ATACCGGCCTTTTTCATCCTTCTCCTCGTCTTCCTCCTCATCCGTCCCGGTTTCATCCTCTTCTCCACCCAGGGGAGCGC CGCCCAGCATGCACCCGTACCCCTTGCCCTGGGGGCCGGCGTCGTGCTCGGCGCTTTGGCCCAGCGGAGCCGCTTCTGCA TCACCGGCAGCATCCGGGACGTCTTCCTCATGGGGAAGCGGACCCCCGCCCTCTGGGGGATGCTCGCCTTTCTGGCCGCG GCGGTCGCCGCCAACCTTGCCACGGGAAGGTTCAATCCCGGTCTCCACGGCCAGCCCGGCGCCCATCTGGAGCACCTCTG GAGCTTCCTCGGCATGGGGCTCACGGGGTGGATCTCCGTCCTCATCGGCGGCTGCCCGTTCCGCCAGCTCATCAAGGCCG GCGAAGGGGATGCCGATGCCGGTCTCGTGGTGGTGGGGATGTTCATCGGCGGCGCCCTGGTGCAGTCGTGGGGGATCGCC GCCACGGCGGCCGGGGTCTCCCTGACCGGGAAGGTGGCGATTCTTGCCGGCTTCGCCTCGGTACTTGCTGCCTCCCTCCT CTTCCGTAGTCGGAGTATCTGA
Upstream 100 bases:
>100_bases TCGGTGGCCGGGCCGCGGCCAATCCCGGCAACCGGAGCCTGGCGGCCTCGCTCGCCAAGGTCAACTACCTCAAGAGCAGG CTGGCCGGGGGGTGCGAGTG
Downstream 100 bases:
>100_bases GCGGAAGTCAAAGTCCCGTCAAAAGGCGACAACCGTCGCGCATGTTCCCTTTTTTGACACCCGAACTCAGCGTCTTCTTT TCCCGTGACGATACGCTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MLRDRHFWMVVAAGLLLGGLGALLAVWGNPENSGICVSCFIENSAGALGMHDNPRMQYLRPELIGFVLGAMASALLFREF RSRGGSAPLPRLFAGIFLMVGCGVFIGCPIKLFLRLTAGDLTAVAGVAGLVAGVWAGLRGLANGVEPGQTSRGQGHGGPL IPAFFILLLVFLLIRPGFILFSTQGSAAQHAPVPLALGAGVVLGALAQRSRFCITGSIRDVFLMGKRTPALWGMLAFLAA AVAANLATGRFNPGLHGQPGAHLEHLWSFLGMGLTGWISVLIGGCPFRQLIKAGEGDADAGLVVVGMFIGGALVQSWGIA ATAAGVSLTGKVAILAGFASVLAASLLFRSRSI
Sequences:
>Translated_353_residues MLRDRHFWMVVAAGLLLGGLGALLAVWGNPENSGICVSCFIENSAGALGMHDNPRMQYLRPELIGFVLGAMASALLFREF RSRGGSAPLPRLFAGIFLMVGCGVFIGCPIKLFLRLTAGDLTAVAGVAGLVAGVWAGLRGLANGVEPGQTSRGQGHGGPL IPAFFILLLVFLLIRPGFILFSTQGSAAQHAPVPLALGAGVVLGALAQRSRFCITGSIRDVFLMGKRTPALWGMLAFLAA AVAANLATGRFNPGLHGQPGAHLEHLWSFLGMGLTGWISVLIGGCPFRQLIKAGEGDADAGLVVVGMFIGGALVQSWGIA ATAAGVSLTGKVAILAGFASVLAASLLFRSRSI >Mature_353_residues MLRDRHFWMVVAAGLLLGGLGALLAVWGNPENSGICVSCFIENSAGALGMHDNPRMQYLRPELIGFVLGAMASALLFREF RSRGGSAPLPRLFAGIFLMVGCGVFIGCPIKLFLRLTAGDLTAVAGVAGLVAGVWAGLRGLANGVEPGQTSRGQGHGGPL IPAFFILLLVFLLIRPGFILFSTQGSAAQHAPVPLALGAGVVLGALAQRSRFCITGSIRDVFLMGKRTPALWGMLAFLAA AVAANLATGRFNPGLHGQPGAHLEHLWSFLGMGLTGWISVLIGGCPFRQLIKAGEGDADAGLVVVGMFIGGALVQSWGIA ATAAGVSLTGKVAILAGFASVLAASLLFRSRSI
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36438; Mature: 36438
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRDRHFWMVVAAGLLLGGLGALLAVWGNPENSGICVSCFIENSAGALGMHDNPRMQYLR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHH PELIGFVLGAMASALLFREFRSRGGSAPLPRLFAGIFLMVGCGVFIGCPIKLFLRLTAGD HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCH LTAVAGVAGLVAGVWAGLRGLANGVEPGQTSRGQGHGGPLIPAFFILLLVFLLIRPGFIL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE FSTQGSAAQHAPVPLALGAGVVLGALAQRSRFCITGSIRDVFLMGKRTPALWGMLAFLAA EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHEECCCCHHHHHHHHHHHH AVAANLATGRFNPGLHGQPGAHLEHLWSFLGMGLTGWISVLIGGCPFRQLIKAGEGDADA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCC GLVVVGMFIGGALVQSWGIAATAAGVSLTGKVAILAGFASVLAASLLFRSRSI HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLRDRHFWMVVAAGLLLGGLGALLAVWGNPENSGICVSCFIENSAGALGMHDNPRMQYLR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHH PELIGFVLGAMASALLFREFRSRGGSAPLPRLFAGIFLMVGCGVFIGCPIKLFLRLTAGD HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCH LTAVAGVAGLVAGVWAGLRGLANGVEPGQTSRGQGHGGPLIPAFFILLLVFLLIRPGFIL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE FSTQGSAAQHAPVPLALGAGVVLGALAQRSRFCITGSIRDVFLMGKRTPALWGMLAFLAA EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHEECCCCHHHHHHHHHHHH AVAANLATGRFNPGLHGQPGAHLEHLWSFLGMGLTGWISVLIGGCPFRQLIKAGEGDADA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCC GLVVVGMFIGGALVQSWGIAATAAGVSLTGKVAILAGFASVLAASLLFRSRSI HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA