| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is modB [H]
Identifier: 78221734
GI number: 78221734
Start: 553044
End: 553727
Strand: Direct
Name: modB [H]
Synonym: Gmet_0513
Alternate gene names: 78221734
Gene position: 553044-553727 (Clockwise)
Preceding gene: 78221733
Following gene: 78221735
Centisome position: 13.84
GC content: 65.94
Gene sequence:
>684_bases ATGTTTTCCTTAACCTCCGCAGACATCGATGCCATCCGGCTCTCGGCCAAAGTCGCCCTTGCGGCGACAGTCGTGTCGCT CCCCTTCGGCATTGCCGTCGCCTACGTGATGAGCTACTGCTCCTTCCGGGGAAAGACCTTCGTGGAGGTGCTCCTCAATC TCCCCCTGACGCTCCCGCCGGTGGTGATCGGCTATCTGCTCCTCCTCCTGCTCGGGAAGAAGGGGTGGGTCGGGGGGCTG CTCGATGCCGCGGGAATACGGATCATCTTCACCTGGTACGCCGCGGTCATCGCCTCGGCGGCGGTGGGGTTTCCGCTCCT GGTCCGCTCCATCCGCATCGCCATGGACTCCATCGACGGACGCCTCATCCAGGCGTCGCGCACCCTGGGGGCCCGCTGGA GCGACACCCTCGCCACCGTCATTCTCCCCCTTTCGCTGCGGGGGATCGTGGCCGGCTCGTCCCTCATGTTCGGCCGCAGC CTCGGCGAGTTCGGCGCCACCATCATCGTTGCCGGAAACATTCCCGGCATTACCCAGACCATCCCCCTGGCTGTCTACGA CTACGTGAGCGCCCCCGGCGGCGAGGGGGCTGCCCTGGCCCTCTGTCTCGTTTCGGCGGGGCTCTCCCTGCTGGTCCTCT TTTTCCATGAATACCTGGCGCGCCGCATGGCGAGGAGGGACTGA
Upstream 100 bases:
>100_bases GCGAAGAAGAAGGAAGCCCGTGGGTTTCTCCGCTTCCTCCGGTCGGTGGAGGCGAAAAGAATTCTTGTCAGGTATGGCTT TGCGGTGAAATAATCCGCCC
Downstream 100 bases:
>100_bases GATGGAATTGCGGGTGAGGGGCGCCAAGACCTTCGGGGCGTTCCATCTGGCGGCTGATTTCACTGTCGAGGGGAACCGCA TCGGCATCTTCGGCGAGTCA
Product: molybdate ABC transporter permease
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MFSLTSADIDAIRLSAKVALAATVVSLPFGIAVAYVMSYCSFRGKTFVEVLLNLPLTLPPVVIGYLLLLLLGKKGWVGGL LDAAGIRIIFTWYAAVIASAAVGFPLLVRSIRIAMDSIDGRLIQASRTLGARWSDTLATVILPLSLRGIVAGSSLMFGRS LGEFGATIIVAGNIPGITQTIPLAVYDYVSAPGGEGAALALCLVSAGLSLLVLFFHEYLARRMARRD
Sequences:
>Translated_227_residues MFSLTSADIDAIRLSAKVALAATVVSLPFGIAVAYVMSYCSFRGKTFVEVLLNLPLTLPPVVIGYLLLLLLGKKGWVGGL LDAAGIRIIFTWYAAVIASAAVGFPLLVRSIRIAMDSIDGRLIQASRTLGARWSDTLATVILPLSLRGIVAGSSLMFGRS LGEFGATIIVAGNIPGITQTIPLAVYDYVSAPGGEGAALALCLVSAGLSLLVLFFHEYLARRMARRD >Mature_227_residues MFSLTSADIDAIRLSAKVALAATVVSLPFGIAVAYVMSYCSFRGKTFVEVLLNLPLTLPPVVIGYLLLLLLGKKGWVGGL LDAAGIRIIFTWYAAVIASAAVGFPLLVRSIRIAMDSIDGRLIQASRTLGARWSDTLATVILPLSLRGIVAGSSLMFGRS LGEFGATIIVAGNIPGITQTIPLAVYDYVSAPGGEGAALALCLVSAGLSLLVLFFHEYLARRMARRD
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=220, Percent_Identity=49.5454545454545, Blast_Score=179, Evalue=1e-46, Organism=Escherichia coli, GI1788764, Length=179, Percent_Identity=32.9608938547486, Blast_Score=100, Evalue=6e-23, Organism=Escherichia coli, GI87082099, Length=223, Percent_Identity=32.2869955156951, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1787713, Length=181, Percent_Identity=29.2817679558011, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1787369, Length=210, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23959; Mature: 23959
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSLTSADIDAIRLSAKVALAATVVSLPFGIAVAYVMSYCSFRGKTFVEVLLNLPLTLPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH VVIGYLLLLLLGKKGWVGGLLDAAGIRIIFTWYAAVIASAAVGFPLLVRSIRIAMDSIDG HHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RLIQASRTLGARWSDTLATVILPLSLRGIVAGSSLMFGRSLGEFGATIIVAGNIPGITQT CEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCHHH IPLAVYDYVSAPGGEGAALALCLVSAGLSLLVLFFHEYLARRMARRD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFSLTSADIDAIRLSAKVALAATVVSLPFGIAVAYVMSYCSFRGKTFVEVLLNLPLTLPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH VVIGYLLLLLLGKKGWVGGLLDAAGIRIIFTWYAAVIASAAVGFPLLVRSIRIAMDSIDG HHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RLIQASRTLGARWSDTLATVILPLSLRGIVAGSSLMFGRSLGEFGATIIVAGNIPGITQT CEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCHHH IPLAVYDYVSAPGGEGAALALCLVSAGLSLLVLFFHEYLARRMARRD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]