Click here to switch to the map view.

The map label for this gene is 78221711

Identifier: 78221711

GI number: 78221711

Start: 536527

End: 536991

Strand: Reverse

Name: 78221711

Synonym: Gmet_0490

Alternate gene names: NA

Gene position: 536991-536527 (Counterclockwise)

Preceding gene: 78221719

Following gene: 78221710

Centisome position: 13.43

GC content: 66.45

Gene sequence:

>465_bases
ATGTTCATGGGCAAGCTCCCCCACCAGGCGGACCTGATCGGCGCCCTCATCGAGGCGGCCGGCGCCAACGGTATCCGGGC
CGGCGCCATCCAGGTGATCGGCGCCCTCCAGGGGGCAAAACTCGGCTTCTACGACCAGTGGAGCAAGAGCTACCGGGAGC
TCCCCTTTGCCAAGCCTCTGGAGATCGTTTCCGGCCTGGGAAACATATCGCTGCGGGACGGCAGGCCCTTCGTCCACCTC
CATCTCTCCATTTCCGACGAAGAGGGGAAGGTCTTCGGCGGCCATGCCCTGGAGGGATGCACCATCTTCGCCGCCGAGTA
CGCCATCATGCCGCTGCCGGGGAGTGCGCCCGTCCGCGTCTTCGACGAGACCACCGGCCTCTTCCTCTGGGAGCGGGAGC
AGTACCCGGCCTCGGGACAGAAGGGGCTCTCCCCCGAGCTTGAGCGGGCGCTTCTCAACCCGTAA

Upstream 100 bases:

>100_bases
GGTGCTTGTCAAGGGGGAATCCCTCCGTTGACTCCCATGGGCAGATGGGCTACAGTGGCCGAAATCCGCCGCCCCGGCGG
AACACGACGGAGGTACGGCA

Downstream 100 bases:

>100_bases
CACCGCACCATCATTCTCAACGTTCCAGGTTTTCATGAAATCAGGATACAAACGGACACCAACTGCGGATGAGCAGGAGC
TTGAACGCAAGCGGCGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MFMGKLPHQADLIGALIEAAGANGIRAGAIQVIGALQGAKLGFYDQWSKSYRELPFAKPLEIVSGLGNISLRDGRPFVHL
HLSISDEEGKVFGGHALEGCTIFAAEYAIMPLPGSAPVRVFDETTGLFLWEREQYPASGQKGLSPELERALLNP

Sequences:

>Translated_154_residues
MFMGKLPHQADLIGALIEAAGANGIRAGAIQVIGALQGAKLGFYDQWSKSYRELPFAKPLEIVSGLGNISLRDGRPFVHL
HLSISDEEGKVFGGHALEGCTIFAAEYAIMPLPGSAPVRVFDETTGLFLWEREQYPASGQKGLSPELERALLNP
>Mature_154_residues
MFMGKLPHQADLIGALIEAAGANGIRAGAIQVIGALQGAKLGFYDQWSKSYRELPFAKPLEIVSGLGNISLRDGRPFVHL
HLSISDEEGKVFGGHALEGCTIFAAEYAIMPLPGSAPVRVFDETTGLFLWEREQYPASGQKGLSPELERALLNP

Specific function: Unknown

COG id: COG1661

COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16591; Mature: 16591

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMGKLPHQADLIGALIEAAGANGIRAGAIQVIGALQGAKLGFYDQWSKSYRELPFAKPL
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHH
EIVSGLGNISLRDGRPFVHLHLSISDEEGKVFGGHALEGCTIFAAEYAIMPLPGSAPVRV
HHHHCCCCEEEECCCCEEEEEEEEECCCCEEECCCCCCCEEEEEEEEEEEECCCCCCEEE
FDETTGLFLWEREQYPASGQKGLSPELERALLNP
EECCCCEEEEECCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MFMGKLPHQADLIGALIEAAGANGIRAGAIQVIGALQGAKLGFYDQWSKSYRELPFAKPL
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHH
EIVSGLGNISLRDGRPFVHLHLSISDEEGKVFGGHALEGCTIFAAEYAIMPLPGSAPVRV
HHHHCCCCEEEECCCCEEEEEEEEECCCCEEECCCCCCCEEEEEEEEEEEECCCCCCEEE
FDETTGLFLWEREQYPASGQKGLSPELERALLNP
EECCCCEEEEECCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA