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The map label for this gene is 78221695

Identifier: 78221695

GI number: 78221695

Start: 520780

End: 521532

Strand: Direct

Name: 78221695

Synonym: Gmet_0474

Alternate gene names: NA

Gene position: 520780-521532 (Clockwise)

Preceding gene: 78221694

Following gene: 78221696

Centisome position: 13.03

GC content: 67.2

Gene sequence:

>753_bases
ATGCACCGACTCTCGCACCCCGTATCGACCCCAAATCCCGTCACCCTGCTCGACCCCCGCGTGAAGCTCGTTTCGGCCCT
GGCGCTTCTCGTGATGGTGGTCAGCTGCACGGGGTTCGCCTTTCCGCTCCTGGCGGCGGCCCTGGGCCTTGCACTCTGCC
TCTGGCTGGGAGTACCGGCGCAGCTGATCCTCGTGCGGTTTGCCGAGCCCCTTTTCATCGCGGCGGTGGTGCTCCTCCTC
AAAACTTTCTTCAGTGGCACCGAGCCCCTGTTCAGCGTCCATCCCTTCGGCCTGGAGATCGTGGCCCACCGCGACGGCCT
CGCCGAGGGGGGCGCCATCGCGGCCCGGATCGCCGGCGCCGTGGCGGTGGTGGCGGCGGTGGGGTTCGCCACCCCCTTCA
CCGACCTCATGGCAGCGCTCGCGTGGCTGAGGGTTCCCCAAGGGCTCATCGATGTGGCCCTCTTTGCCTGGCGTTACCTC
TTCGTCCTCTTCGACGACGCCCAGGTGGTCTACGCTGCCCAGCGGAACCGCCTTGGCTACGCCGGTTTCCGGCGGGGGTT
GCGCTCCTTCGGGATGCTGGCCGGCGCCCTGGTCATCAAGGCCTTTGACACGAGCCAGACCATCACCACCGCCATGGTGC
AGCGGGGGTACGACGGGAACCTTCCCCTCTTGAAGCACCGTCCTTTCAGGGCCGAGGAGGCGACTGCATCGGTTCTCTTC
GTGGCGGCCATGGGGATGTTGCGGTGGCTATAG

Upstream 100 bases:

>100_bases
TCCTGGCAGCCGGTGCCGTTGGGGGATTCGCGGCGGGATACTGGTGGCGGATGCTCGTCACGGAAAAAGGGAACGGTTCG
AAGCGGGGAGAACCATAACC

Downstream 100 bases:

>100_bases
CGCGCCTCTCCGTGGATATTCGGGCCTTCACCTACCCCGACGGCACCCGGGCCCTGGCCGACATCCGGTTTGAGGTGGGA
AAGGGTGAATTCTGCGGCAT

Product: cobalt ABC transporter CbiQ, permease subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MHRLSHPVSTPNPVTLLDPRVKLVSALALLVMVVSCTGFAFPLLAAALGLALCLWLGVPAQLILVRFAEPLFIAAVVLLL
KTFFSGTEPLFSVHPFGLEIVAHRDGLAEGGAIAARIAGAVAVVAAVGFATPFTDLMAALAWLRVPQGLIDVALFAWRYL
FVLFDDAQVVYAAQRNRLGYAGFRRGLRSFGMLAGALVIKAFDTSQTITTAMVQRGYDGNLPLLKHRPFRAEEATASVLF
VAAMGMLRWL

Sequences:

>Translated_250_residues
MHRLSHPVSTPNPVTLLDPRVKLVSALALLVMVVSCTGFAFPLLAAALGLALCLWLGVPAQLILVRFAEPLFIAAVVLLL
KTFFSGTEPLFSVHPFGLEIVAHRDGLAEGGAIAARIAGAVAVVAAVGFATPFTDLMAALAWLRVPQGLIDVALFAWRYL
FVLFDDAQVVYAAQRNRLGYAGFRRGLRSFGMLAGALVIKAFDTSQTITTAMVQRGYDGNLPLLKHRPFRAEEATASVLF
VAAMGMLRWL
>Mature_250_residues
MHRLSHPVSTPNPVTLLDPRVKLVSALALLVMVVSCTGFAFPLLAAALGLALCLWLGVPAQLILVRFAEPLFIAAVVLLL
KTFFSGTEPLFSVHPFGLEIVAHRDGLAEGGAIAARIAGAVAVVAAVGFATPFTDLMAALAWLRVPQGLIDVALFAWRYL
FVLFDDAQVVYAAQRNRLGYAGFRRGLRSFGMLAGALVIKAFDTSQTITTAMVQRGYDGNLPLLKHRPFRAEEATASVLF
VAAMGMLRWL

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339
- InterPro:   IPR012809 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 26889; Mature: 26889

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLSHPVSTPNPVTLLDPRVKLVSALALLVMVVSCTGFAFPLLAAALGLALCLWLGVPA
CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QLILVRFAEPLFIAAVVLLLKTFFSGTEPLFSVHPFGLEIVAHRDGLAEGGAIAARIAGA
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHH
VAVVAAVGFATPFTDLMAALAWLRVPQGLIDVALFAWRYLFVLFDDAQVVYAAQRNRLGY
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH
AGFRRGLRSFGMLAGALVIKAFDTSQTITTAMVQRGYDGNLPLLKHRPFRAEEATASVLF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
VAAMGMLRWL
HHHHHHHHCC
>Mature Secondary Structure
MHRLSHPVSTPNPVTLLDPRVKLVSALALLVMVVSCTGFAFPLLAAALGLALCLWLGVPA
CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QLILVRFAEPLFIAAVVLLLKTFFSGTEPLFSVHPFGLEIVAHRDGLAEGGAIAARIAGA
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHH
VAVVAAVGFATPFTDLMAALAWLRVPQGLIDVALFAWRYLFVLFDDAQVVYAAQRNRLGY
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH
AGFRRGLRSFGMLAGALVIKAFDTSQTITTAMVQRGYDGNLPLLKHRPFRAEEATASVLF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
VAAMGMLRWL
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]