| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221673
Identifier: 78221673
GI number: 78221673
Start: 498874
End: 499758
Strand: Reverse
Name: 78221673
Synonym: Gmet_0452
Alternate gene names: NA
Gene position: 499758-498874 (Counterclockwise)
Preceding gene: 78221674
Following gene: 78221672
Centisome position: 12.5
GC content: 51.41
Gene sequence:
>885_bases ATGGTTGCCGAGACAATAAAATCATTCTGTGGGGACAGACAAACTACGGTCTGCCGGATATGCGGGGAGACATTGACCGA AACGACAGTAACGTCGGGTCAGCAGCCTTACGAGACGACCTGGATTCTCTGTGGAGCGTGTGGGTCATGGTCCATAGGCC GCGAACCGGACATTGAGCGCCTGAATGCATTTTATTCTGACTATTCAGTCCACCATAAAATGGCAGCGACAAACACCGAC GCAAATGATGGAAAGCGATATAGCGATGAGTGGCGGGAAACCAGAGAGCGGGAATACCGTTTAAGCATCAACGATATAGG CCTAGAGTTGGAGCAAGGCAAAGACCTTGTGGATTTCGGTGCATACGATGGCGTTTTCCTTGACGTCTGCCGGGCAACAC AACCGAATATGGGAAAGACAACGGCTGTCGATTACCCACGAGAAGACACTCTTCATCTTGCGGTTCGGGGGCACAACTTC GAACCAATCAACGAGTGGCTGGCAGGAGAGAGTCTAACCGACATCGTCACTCTTTGGGATGTCTACGAACATATAGCCGA TCTCCCCGGATTACTGACAACGCTATCCCGGAGAGTGAAATCAGGAGGTCAGGTTCTTATCCAAACTCCCCGCGCCCATG TTCATGCCCAAATTCTAGGACCGCAATGGCACCATTTTCTTCCTGTTCAGCATCTTCAGCTTCCAAGCAGGGAAGGCATT CTGCGTCAATTTGATCGTTACGGGTTTACCGCCGTTCAAGTTGCGTCATTTGGGGCAAACGCCCCAGGAAGTATCATCCC GCAGCCCTACAAGCAGTTGTTCGATACGCTGGCCAAACTGGGTGATCTAGGCTCGACACAGTTGATCCGTTTTGTTCGAC GCTGA
Upstream 100 bases:
>100_bases CTAACATCAGTCAAGAGATCGTTGTACCAAAGCCTTGCCAATCTCAACATTGGTCGTGAAGTATGTCTTTATTCACGGCG AACTGATTAAAGGATACGAA
Downstream 100 bases:
>100_bases TGTCTAAGCGATTTGACACTGATTCTCAAATGCAGGAAAAGGAATCATCATGACGATTAGGCGTAATTTCACGGCATCTG TAAGAGAAAACGCCCTTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MVAETIKSFCGDRQTTVCRICGETLTETTVTSGQQPYETTWILCGACGSWSIGREPDIERLNAFYSDYSVHHKMAATNTD ANDGKRYSDEWRETREREYRLSINDIGLELEQGKDLVDFGAYDGVFLDVCRATQPNMGKTTAVDYPREDTLHLAVRGHNF EPINEWLAGESLTDIVTLWDVYEHIADLPGLLTTLSRRVKSGGQVLIQTPRAHVHAQILGPQWHHFLPVQHLQLPSREGI LRQFDRYGFTAVQVASFGANAPGSIIPQPYKQLFDTLAKLGDLGSTQLIRFVRR
Sequences:
>Translated_294_residues MVAETIKSFCGDRQTTVCRICGETLTETTVTSGQQPYETTWILCGACGSWSIGREPDIERLNAFYSDYSVHHKMAATNTD ANDGKRYSDEWRETREREYRLSINDIGLELEQGKDLVDFGAYDGVFLDVCRATQPNMGKTTAVDYPREDTLHLAVRGHNF EPINEWLAGESLTDIVTLWDVYEHIADLPGLLTTLSRRVKSGGQVLIQTPRAHVHAQILGPQWHHFLPVQHLQLPSREGI LRQFDRYGFTAVQVASFGANAPGSIIPQPYKQLFDTLAKLGDLGSTQLIRFVRR >Mature_294_residues MVAETIKSFCGDRQTTVCRICGETLTETTVTSGQQPYETTWILCGACGSWSIGREPDIERLNAFYSDYSVHHKMAATNTD ANDGKRYSDEWRETREREYRLSINDIGLELEQGKDLVDFGAYDGVFLDVCRATQPNMGKTTAVDYPREDTLHLAVRGHNF EPINEWLAGESLTDIVTLWDVYEHIADLPGLLTTLSRRVKSGGQVLIQTPRAHVHAQILGPQWHHFLPVQHLQLPSREGI LRQFDRYGFTAVQVASFGANAPGSIIPQPYKQLFDTLAKLGDLGSTQLIRFVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33129; Mature: 33129
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAETIKSFCGDRQTTVCRICGETLTETTVTSGQQPYETTWILCGACGSWSIGREPDIER CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHH LNAFYSDYSVHHKMAATNTDANDGKRYSDEWRETREREYRLSINDIGLELEQGKDLVDFG HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEHHHHCEEHHCCCCEEHHC AYDGVFLDVCRATQPNMGKTTAVDYPREDTLHLAVRGHNFEPINEWLAGESLTDIVTLWD CCCCHHHHHHHCCCCCCCCCEECCCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHH VYEHIADLPGLLTTLSRRVKSGGQVLIQTPRAHVHAQILGPQWHHFLPVQHLQLPSREGI HHHHHHHCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCHHHCCCHHHHCCCCCCHH LRQFDRYGFTAVQVASFGANAPGSIIPQPYKQLFDTLAKLGDLGSTQLIRFVRR HHHHHHCCCHHEEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHC >Mature Secondary Structure MVAETIKSFCGDRQTTVCRICGETLTETTVTSGQQPYETTWILCGACGSWSIGREPDIER CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHH LNAFYSDYSVHHKMAATNTDANDGKRYSDEWRETREREYRLSINDIGLELEQGKDLVDFG HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEHHHHCEEHHCCCCEEHHC AYDGVFLDVCRATQPNMGKTTAVDYPREDTLHLAVRGHNFEPINEWLAGESLTDIVTLWD CCCCHHHHHHHCCCCCCCCCEECCCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHH VYEHIADLPGLLTTLSRRVKSGGQVLIQTPRAHVHAQILGPQWHHFLPVQHLQLPSREGI HHHHHHHCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCHHHCCCHHHHCCCCCCHH LRQFDRYGFTAVQVASFGANAPGSIIPQPYKQLFDTLAKLGDLGSTQLIRFVRR HHHHHHCCCHHEEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA