Click here to switch to the map view.

The map label for this gene is argH2 [H]

Identifier: 78221670

GI number: 78221670

Start: 495313

End: 496527

Strand: Reverse

Name: argH2 [H]

Synonym: Gmet_0449

Alternate gene names: 78221670

Gene position: 496527-495313 (Counterclockwise)

Preceding gene: 78221671

Following gene: 78221669

Centisome position: 12.42

GC content: 56.38

Gene sequence:

>1215_bases
ATGAACTCTGAAAAACGCCCCGCCATTCTCGTAGTCAGTGCCGGCATAATGCAGATACCCGCATTAGAGCGAGCCCGCGC
CCTCGGATACTATGTCATCGCCAGTGACCGCAATCCCGAGGCCCCAGGGTTCCAACTGGCGGACGAGCACCTCGTACTGG
ACGTCAAAGATGTCGAGGGGCATGTGGCATGGGCGAGGGAGCACGGGAAAAGGGTTGGGCTGAAAGGGGCCTTTGCCGGC
GCAGATGTGGCAATTACGGTTGCAGCGGTCTGCGAGGAACTCGGCTTGCCAGGGGTTCCGGTGGAGGTGGCCAGACGGTC
GAACAACAAGGCCCTTATGAAAGAAAGATGGCTGCGGGACAAAATTCCGACCCCATGGAGCGCCGAAGCGTCGACGCTGG
AGGAAGCTCAAAAAATTCTTGTTCATACAGGCTTCCCTGCCATCGTAAAAGCAGTTGATGGCGCTGCATCACGGGGGAGC
ATGCGCATCGACCGGCCTGATCAGCTTCCCGCCGCCTTCAAAGCCGCCTGCGCCACCTCGCGAACCGGGACGGCAATTAT
CGAGCAATTCGTAGTGGGGAAAGAACAGAGCGTCGAAACCATCATTTGGAAGGGGAAGCATTATCACGTTAGTCTGGCTG
ACAGGCACTTCGGTTTCGCTCCCTACGCCATAGAAACAGCCCATGTGGACCCCTCGAACCTCGACAAGGAAACACAAAAG
CGCATCTGTGAGGTCGTCGATGCTGCTGCCGACTCGTTAGGTATTGATTTTGGCCCCGCGAAAGCCGACATGATACTGAC
CGATCAGGGGCCGATGATACTCGAGATGCCGGCACGGCTGAGCGGTGGATTCCATTCCCAGTACACGACACCTCTGAGTT
CCGGGAAAGACCCAATCAAAGCCGTCATGAAGTTGGCCATGGGAGAGCAACTGGACGAGAGCCTCCTTGCCGCCAAGCAT
GATAGGACATCCATCTGTGCAGGAATTTTCCCCGAACCCGGCATAATCAGATCCATCAGTGGAATAGAAGAAGCGCGCGC
ATTACCCGGGATCGAGCAGATATTGATTACGAAGGCTGTAGGTGATCGGGTTGAGCCCATGATAGACAACGGTAAACGGT
GCTGCTGGGTGATCGCTGTTGGCGAGGATGAAAAAGACGCGTGGTCACGCATTGATGCAACTCGTCAGGTGATCCGCTTC
GAGACGGTCCCTTAA

Upstream 100 bases:

>100_bases
ACGTTGACCGATCTTCTGCACTTCTATGACGACCCTGAATCAAACCTGGAATAAAAGATTCCAACAGCCCAAAAGTAACC
ATCAGGTAAGGAATTTCCCC

Downstream 100 bases:

>100_bases
TGTCACTATCTCTCTATACCATCTTCCACCTGAACCTGGCCTTCTCTTCCATCGAGGAAGAGTTGCGCCCCGAGGTGGTC
CGCCGCTGTTACTGGCCTCT

Product: putative glycolate oxidase

Products: NA

Alternate protein names: ASAL 2; Arginosuccinase 2 [H]

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MNSEKRPAILVVSAGIMQIPALERARALGYYVIASDRNPEAPGFQLADEHLVLDVKDVEGHVAWAREHGKRVGLKGAFAG
ADVAITVAAVCEELGLPGVPVEVARRSNNKALMKERWLRDKIPTPWSAEASTLEEAQKILVHTGFPAIVKAVDGAASRGS
MRIDRPDQLPAAFKAACATSRTGTAIIEQFVVGKEQSVETIIWKGKHYHVSLADRHFGFAPYAIETAHVDPSNLDKETQK
RICEVVDAAADSLGIDFGPAKADMILTDQGPMILEMPARLSGGFHSQYTTPLSSGKDPIKAVMKLAMGEQLDESLLAAKH
DRTSICAGIFPEPGIIRSISGIEEARALPGIEQILITKAVGDRVEPMIDNGKRCCWVIAVGEDEKDAWSRIDATRQVIRF
ETVP

Sequences:

>Translated_404_residues
MNSEKRPAILVVSAGIMQIPALERARALGYYVIASDRNPEAPGFQLADEHLVLDVKDVEGHVAWAREHGKRVGLKGAFAG
ADVAITVAAVCEELGLPGVPVEVARRSNNKALMKERWLRDKIPTPWSAEASTLEEAQKILVHTGFPAIVKAVDGAASRGS
MRIDRPDQLPAAFKAACATSRTGTAIIEQFVVGKEQSVETIIWKGKHYHVSLADRHFGFAPYAIETAHVDPSNLDKETQK
RICEVVDAAADSLGIDFGPAKADMILTDQGPMILEMPARLSGGFHSQYTTPLSSGKDPIKAVMKLAMGEQLDESLLAAKH
DRTSICAGIFPEPGIIRSISGIEEARALPGIEQILITKAVGDRVEPMIDNGKRCCWVIAVGEDEKDAWSRIDATRQVIRF
ETVP
>Mature_404_residues
MNSEKRPAILVVSAGIMQIPALERARALGYYVIASDRNPEAPGFQLADEHLVLDVKDVEGHVAWAREHGKRVGLKGAFAG
ADVAITVAAVCEELGLPGVPVEVARRSNNKALMKERWLRDKIPTPWSAEASTLEEAQKILVHTGFPAIVKAVDGAASRGS
MRIDRPDQLPAAFKAACATSRTGTAIIEQFVVGKEQSVETIIWKGKHYHVSLADRHFGFAPYAIETAHVDPSNLDKETQK
RICEVVDAAADSLGIDFGPAKADMILTDQGPMILEMPARLSGGFHSQYTTPLSSGKDPIKAVMKLAMGEQLDESLLAAKH
DRTSICAGIFPEPGIIRSISGIEEARALPGIEQILITKAVGDRVEPMIDNGKRCCWVIAVGEDEKDAWSRIDATRQVIRF
ETVP

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009049
- InterPro:   IPR011761
- InterPro:   IPR003806
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005479
- InterPro:   IPR003031
- InterPro:   IPR000362
- InterPro:   IPR008948
- InterPro:   IPR022761 [H]

Pfam domain/function: PF02655 ATP-grasp_3; PF00206 Lyase_1 [H]

EC number: =4.3.2.1 [H]

Molecular weight: Translated: 43781; Mature: 43781

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSEKRPAILVVSAGIMQIPALERARALGYYVIASDRNPEAPGFQLADEHLVLDVKDVEG
CCCCCCCEEEEEECCCHHCCHHHHHHHCEEEEEECCCCCCCCCCEECCCEEEEEEEECCC
HVAWAREHGKRVGLKGAFAGADVAITVAAVCEELGLPGVPVEVARRSNNKALMKERWLRD
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHH
KIPTPWSAEASTLEEAQKILVHTGFPAIVKAVDGAASRGSMRIDRPDQLPAAFKAACATS
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHCC
RTGTAIIEQFVVGKEQSVETIIWKGKHYHVSLADRHFGFAPYAIETAHVDPSNLDKETQK
CCHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEECCCHHCCCHHHHH
RICEVVDAAADSLGIDFGPAKADMILTDQGPMILEMPARLSGGFHSQYTTPLSSGKDPIK
HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECHHHCCCCCCCCCCCCCCCCHHHH
AVMKLAMGEQLDESLLAAKHDRTSICAGIFPEPGIIRSISGIEEARALPGIEQILITKAV
HHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
GDRVEPMIDNGKRCCWVIAVGEDEKDAWSRIDATRQVIRFETVP
CCCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure
MNSEKRPAILVVSAGIMQIPALERARALGYYVIASDRNPEAPGFQLADEHLVLDVKDVEG
CCCCCCCEEEEEECCCHHCCHHHHHHHCEEEEEECCCCCCCCCCEECCCEEEEEEEECCC
HVAWAREHGKRVGLKGAFAGADVAITVAAVCEELGLPGVPVEVARRSNNKALMKERWLRD
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHH
KIPTPWSAEASTLEEAQKILVHTGFPAIVKAVDGAASRGSMRIDRPDQLPAAFKAACATS
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHCC
RTGTAIIEQFVVGKEQSVETIIWKGKHYHVSLADRHFGFAPYAIETAHVDPSNLDKETQK
CCHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEECCCHHCCCHHHHH
RICEVVDAAADSLGIDFGPAKADMILTDQGPMILEMPARLSGGFHSQYTTPLSSGKDPIK
HHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECHHHCCCCCCCCCCCCCCCCHHHH
AVMKLAMGEQLDESLLAAKHDRTSICAGIFPEPGIIRSISGIEEARALPGIEQILITKAV
HHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
GDRVEPMIDNGKRCCWVIAVGEDEKDAWSRIDATRQVIRFETVP
CCCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]