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The map label for this gene is flgH

Identifier: 78221654

GI number: 78221654

Start: 479548

End: 480228

Strand: Direct

Name: flgH

Synonym: Gmet_0433

Alternate gene names: 78221654

Gene position: 479548-480228 (Clockwise)

Preceding gene: 78221653

Following gene: 78221655

Centisome position: 12.0

GC content: 63.0

Gene sequence:

>681_bases
GTGAAACGATTGGCAGTGTCAATACTTTGTCTTGCCCTGGCCGGCTGCGCCATCGAGAAGGCTGAAGTGAGAACCCCCTC
CTTTGATGAACAGCTTCCGGCGCCCCAGCCCTCCTACGCCAGCGGCTCCATCTGGCAGGCGGCGTCGGCGGGGATCGCCG
AGGACCACAAGGCCCGCAGGAAGGGCGACATCATCACGGTCGTGATCGTCGAGAACGCCAGCGCCAGCAAGCAGGCCACC
ACCGATACGGACCGCAAGGCCAGCATTTCGGCCAGCATTCCCTACCTCATGGGGCTTGAGAAGCAGAAGCTGATCCTGGG
CAAGCTGACGGGCGCCGACCTCGGCAACCTCCTGGGGGCCAGCACCGACTCCACCTTCGGGGGAAGCGGCGCCACCACCC
GGAAGGAAAATCTCGTGGCCACCATGAGCGCCAAGATCATCGACGTCCTCCCCAACGGCAACTTCCTCATCGAGGGGCGG
CGCAACGTGAAGGTGAACAACGAGGACCAGATCATCATCCTCCAGGGGACCGTGCGTCCCCGGGACGTGTCGCCGGACAA
CACGGTCAATTCCAGCCTCATCGCCGATGCCCGCATCACCTACACCGGCGAGGGGGTCATCAGCGACCGGCAGCGGCCGG
GGTGGTTGATGAATTTCCTTGACTATATCTGGCCGTTTTAA

Upstream 100 bases:

>100_bases
GCCGGCCCGGGTGATTGATGCCGGCACCGTACAGGTGGATTTCTAGGTGTTACTGGTCCCCGGTCCCGGATCCCGGGTCC
CCGGCCTTCAGGAGTTGTCA

Downstream 100 bases:

>100_bases
CGGCCGGGACTAGGGACCGGGGACCAGGGACCAGGAAAACCAGCGTCCCGGATCACGGATCACGGATCACTACTATGATT
AAACGAATTATCTCCATAGT

Product: flagellar L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKRLAVSILCLALAGCAIEKAEVRTPSFDEQLPAPQPSYASGSIWQAASAGIAEDHKARRKGDIITVVIVENASASKQAT
TDTDRKASISASIPYLMGLEKQKLILGKLTGADLGNLLGASTDSTFGGSGATTRKENLVATMSAKIIDVLPNGNFLIEGR
RNVKVNNEDQIIILQGTVRPRDVSPDNTVNSSLIADARITYTGEGVISDRQRPGWLMNFLDYIWPF

Sequences:

>Translated_226_residues
MKRLAVSILCLALAGCAIEKAEVRTPSFDEQLPAPQPSYASGSIWQAASAGIAEDHKARRKGDIITVVIVENASASKQAT
TDTDRKASISASIPYLMGLEKQKLILGKLTGADLGNLLGASTDSTFGGSGATTRKENLVATMSAKIIDVLPNGNFLIEGR
RNVKVNNEDQIIILQGTVRPRDVSPDNTVNSSLIADARITYTGEGVISDRQRPGWLMNFLDYIWPF
>Mature_226_residues
MKRLAVSILCLALAGCAIEKAEVRTPSFDEQLPAPQPSYASGSIWQAASAGIAEDHKARRKGDIITVVIVENASASKQAT
TDTDRKASISASIPYLMGLEKQKLILGKLTGADLGNLLGASTDSTFGGSGATTRKENLVATMSAKIIDVLPNGNFLIEGR
RNVKVNNEDQIIILQGTVRPRDVSPDNTVNSSLIADARITYTGEGVISDRQRPGWLMNFLDYIWPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=234, Percent_Identity=32.9059829059829, Blast_Score=101, Evalue=3e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_GEOMG (Q39YJ8)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_383401.1
- STRING:   Q39YJ8
- GeneID:   3738364
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_0433
- NMPDR:   fig|269799.3.peg.461
- eggNOG:   COG2063
- HOGENOM:   HBG507455
- OMA:   IAGEKQI
- PhylomeDB:   Q39YJ8
- ProtClustDB:   CLSK829074
- BioCyc:   GMET269799:GMET_0433-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 24275; Mature: 24275

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLAVSILCLALAGCAIEKAEVRTPSFDEQLPAPQPSYASGSIWQAASAGIAEDHKARR
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHH
KGDIITVVIVENASASKQATTDTDRKASISASIPYLMGLEKQKLILGKLTGADLGNLLGA
CCCEEEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHCCCCHHEEEEECCCCCHHHHHCC
STDSTFGGSGATTRKENLVATMSAKIIDVLPNGNFLIEGRRNVKVNNEDQIIILQGTVRP
CCCCCCCCCCCCCCHHCEEEEEEEEEEEEECCCCEEEECCCCEEECCCCCEEEEECCCCC
RDVSPDNTVNSSLIADARITYTGEGVISDRQRPGWLMNFLDYIWPF
CCCCCCCCCCCCEEECEEEEEECCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKRLAVSILCLALAGCAIEKAEVRTPSFDEQLPAPQPSYASGSIWQAASAGIAEDHKARR
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHH
KGDIITVVIVENASASKQATTDTDRKASISASIPYLMGLEKQKLILGKLTGADLGNLLGA
CCCEEEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHCCCCHHEEEEECCCCCHHHHHCC
STDSTFGGSGATTRKENLVATMSAKIIDVLPNGNFLIEGRRNVKVNNEDQIIILQGTVRP
CCCCCCCCCCCCCCHHCEEEEEEEEEEEEECCCCEEEECCCCEEECCCCCEEEEECCCCC
RDVSPDNTVNSSLIADARITYTGEGVISDRQRPGWLMNFLDYIWPF
CCCCCCCCCCCCEEECEEEEEECCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA