| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221623
Identifier: 78221623
GI number: 78221623
Start: 444647
End: 445003
Strand: Direct
Name: 78221623
Synonym: Gmet_0402
Alternate gene names: NA
Gene position: 444647-445003 (Clockwise)
Preceding gene: 78221622
Following gene: 78221624
Centisome position: 11.12
GC content: 52.66
Gene sequence:
>357_bases ATGGCGACAACGATCAATGATCTTGTGTTGGTTCATATCGACAGCAAGCCCGGCTTCTACGCTCGGATCGAGGATATTTC GCCGGATGTCAAGGCTGGTTGGTGGCGAGTCAGGCTCCTGGTGTTGACGGTGCCGCTGGAGATCTATACTTGGATTCTTG AGGAGGCACAGATCAACGGAGCCCCCTTCACCATGGGAGGAACTCCTATCCGTATGGAGAAAGTGGTCTCTCCGGTCCTG GGAGATTCTGCTTCTGCCCCTTCTCCTCCGCAACCTTTCCCCACTCCCCAGGAAGAAAAAGATCAGGGTAAGGGGGGGAA AGTTGTTTCTCTTCTTGATCGAAAAAAAGACAAGTGA
Upstream 100 bases:
>100_bases CTCTTTATGGGAAGCTGGAGCAGCTTTTTGCCCACCGTGCCGGTGCGGCGCGAAGGATGGCGATCCTGGGATACAACCAA TAATCTGGAAAGGTGTGCCA
Downstream 100 bases:
>100_bases TTCATGGGGGGCTTGGCCCCCTCTTTCCCTCCCAGTTCATTCCTCCCTTTTTCACGTTGTATCATTCCCTTCCCGAATAA TTCGTTTAAGTGTTCTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MATTINDLVLVHIDSKPGFYARIEDISPDVKAGWWRVRLLVLTVPLEIYTWILEEAQINGAPFTMGGTPIRMEKVVSPVL GDSASAPSPPQPFPTPQEEKDQGKGGKVVSLLDRKKDK
Sequences:
>Translated_118_residues MATTINDLVLVHIDSKPGFYARIEDISPDVKAGWWRVRLLVLTVPLEIYTWILEEAQINGAPFTMGGTPIRMEKVVSPVL GDSASAPSPPQPFPTPQEEKDQGKGGKVVSLLDRKKDK >Mature_117_residues ATTINDLVLVHIDSKPGFYARIEDISPDVKAGWWRVRLLVLTVPLEIYTWILEEAQINGAPFTMGGTPIRMEKVVSPVLG DSASAPSPPQPFPTPQEEKDQGKGGKVVSLLDRKKDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12996; Mature: 12865
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTINDLVLVHIDSKPGFYARIEDISPDVKAGWWRVRLLVLTVPLEIYTWILEEAQING CCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCC APFTMGGTPIRMEKVVSPVLGDSASAPSPPQPFPTPQEEKDQGKGGKVVSLLDRKKDK CCEEECCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure ATTINDLVLVHIDSKPGFYARIEDISPDVKAGWWRVRLLVLTVPLEIYTWILEEAQING CCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCC APFTMGGTPIRMEKVVSPVLGDSASAPSPPQPFPTPQEEKDQGKGGKVVSLLDRKKDK CCEEECCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA