| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is yqeY [H]
Identifier: 78221613
GI number: 78221613
Start: 434308
End: 434748
Strand: Direct
Name: yqeY [H]
Synonym: Gmet_0392
Alternate gene names: 78221613
Gene position: 434308-434748 (Clockwise)
Preceding gene: 78221612
Following gene: 78221614
Centisome position: 10.86
GC content: 58.28
Gene sequence:
>441_bases ATGCTGCGGGACAGACTGAACGATGAGATGAAGCAGGCCATGAAGGCCCGGGACGAGATACGGCTCTCCGTCATCCGTCT CATTCGCTCATCGGTCAAAAATCGTGAAATCGAGTTGCGGCACGAGCTTACCGATGGGGAGATAACGGAGGTTCTCTCCA CCTTGGTCAAGCAACGCCGGGAGTCGATCCGGATGTTTGGCGAGGCAGGTCGGACCGACCTCGTCGAGAAGGAGGAGAAA GAGCTGGCAGTGCTTCTCACCTTCCTCCCGCAGCAGCTTTCCCGTGAAGAGGTTGAGGCGCTGGTCGTGCAGGCCATCGC AGACAGTGGAGCCCAGGGCCCGAAGGATATGGGGAAGGTGATGAAAGCCATCATGCCTCACGTGACCGGCAGGGCTGACG GTTCCCTGGTCAGTGTAGTGGTTAAGGAAAAGCTTGCGTAG
Upstream 100 bases:
>100_bases TTACGAGAAGCCGAGCATCAAGAAGAAGAAAAAGGCTATCGCCGCGCGCAAGCGTGCCATGAAAAAACAGCGTAAGATGA TGGACTAATCAGGGATATTC
Downstream 100 bases:
>100_bases CGTTGCGCTCTTTTTCTGACATCACAATACTAATATGAGCTATGGGGGCGATTCTCTGGATTGCCCCCTTCTTCTTTTGC CCGTTGTTAAGGTTACGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLRDRLNDEMKQAMKARDEIRLSVIRLIRSSVKNREIELRHELTDGEITEVLSTLVKQRRESIRMFGEAGRTDLVEKEEK ELAVLLTFLPQQLSREEVEALVVQAIADSGAQGPKDMGKVMKAIMPHVTGRADGSLVSVVVKEKLA
Sequences:
>Translated_146_residues MLRDRLNDEMKQAMKARDEIRLSVIRLIRSSVKNREIELRHELTDGEITEVLSTLVKQRRESIRMFGEAGRTDLVEKEEK ELAVLLTFLPQQLSREEVEALVVQAIADSGAQGPKDMGKVMKAIMPHVTGRADGSLVSVVVKEKLA >Mature_146_residues MLRDRLNDEMKQAMKARDEIRLSVIRLIRSSVKNREIELRHELTDGEITEVLSTLVKQRRESIRMFGEAGRTDLVEKEEK ELAVLLTFLPQQLSREEVEALVVQAIADSGAQGPKDMGKVMKAIMPHVTGRADGSLVSVVVKEKLA
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16450; Mature: 16450
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRDRLNDEMKQAMKARDEIRLSVIRLIRSSVKNREIELRHELTDGEITEVLSTLVKQRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHH ESIRMFGEAGRTDLVEKEEKELAVLLTFLPQQLSREEVEALVVQAIADSGAQGPKDMGKV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH MKAIMPHVTGRADGSLVSVVVKEKLA HHHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MLRDRLNDEMKQAMKARDEIRLSVIRLIRSSVKNREIELRHELTDGEITEVLSTLVKQRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHH ESIRMFGEAGRTDLVEKEEKELAVLLTFLPQQLSREEVEALVVQAIADSGAQGPKDMGKV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH MKAIMPHVTGRADGSLVSVVVKEKLA HHHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]